RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 RIPOR3Q96MK2 946 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 INPP4AQ96PE3 977 aaPredicted RBP2.61□□□□□ -1.99
SRP54-204ENST00000553923 MAGEH1Q9H213 219 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 CERS4Q9HA82 394 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 SDF2L1Q9HCN8 221 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 SAGE1Q9NXZ1 904 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 RABGAP1Q9Y3P9 1069 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 SNX13Q9Y5W8 968 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 WDR81Q562E7 1941 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 SNED1Q8TER0 1413 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 DENND3A2RUS2 1198 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 PRR23AA6NEV1 266 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 SLC16A5O15375 505 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 FIBPO43427 364 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 IGLV2-11P01706 119 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 FCGR1AP12314 374 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 MYF5P13349 255 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 ARSBP15848 533 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 ABCB4P21439 1286 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 PEX2P28328 305 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 CIITAP33076 1130 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 CLCN5P51795 746 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 FAM193AP78312 1265 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 DDX10Q13206 875 aaKnown RBP2.6□□□□□ -1.99
SRP54-204ENST00000553923 PDE1CQ14123 709 aaPredicted RBP2.6□□□□□ -1.99
SRP54-204ENST00000553923 TUBB8Q3ZCM7 444 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 GLE1Q53GS7 698 aaKnown RBP2.6□□□□□ -1.99
SRP54-204ENST00000553923 TTC39AQ5SRH9 613 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 WBP2NLQ6ICG8 309 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 HMBOX1Q6NT76 420 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 SLC16A12Q6ZSM3 486 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 CHST15Q7LFX5 561 aaPredicted RBP2.6□□□□□ -1.99
SRP54-204ENST00000553923 SUGP1Q8IWZ8 645 aaKnown RBP2.6□□□□□ -1.99
SRP54-204ENST00000553923 FAM47BQ8NA70 645 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 ENGASEQ8NFI3 743 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 OR52L2PQ8NGH6 319 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 GLMPQ8WWB7 406 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 KAT2AQ92830 837 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 APIPQ96GX9 242 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 SGCZQ96LD1 299 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 GPR78Q96P69 363 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 ZNF347Q96SE7 839 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 KRCC1Q9NPI7 259 aaPredicted RBP2.6□□□□□ -1.99
SRP54-204ENST00000553923 TBC1D14Q9P2M4 693 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 ZNF212Q9UDV6 495 aa2.6□□□□□ -1.99
SRP54-204ENST00000553923 DPPA5A6NC42 116 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 RHPN2P1A8MT19 583 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 RASA4BC9J798 803 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 I6L893 689 aaPredicted RBP2.59□□□□□ -1.99
SRP54-204ENST00000553923 GOLIM4O00461 696 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 RASA4O43374 803 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 HRGP04196 525 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 CYP1A2P05177 515 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 PYGLP06737 847 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 SLC3A2P08195 630 aaKnown RBP2.59□□□□□ -1.99
SRP54-204ENST00000553923 ARP10275 920 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 RRM1P23921 792 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 PPM1AP35813 382 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 PRIM2P49643 509 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 SELENOVP59797 346 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 POU5F1Q01860 360 aaKnown RBP2.59□□□□□ -1.99
SRP54-204ENST00000553923 POU3F1Q03052 451 aaPredicted RBP2.59□□□□□ -1.99
SRP54-204ENST00000553923 TNFAIP2Q03169 654 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 BTKQ06187 659 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 G3BP1Q13283 466 aaKnown RBP eCLIP2.59□□□□□ -1.99
SRP54-204ENST00000553923 TAF12Q16514 161 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 CCDC38Q502W7 563 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 LRIG3Q6UXM1 1119 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 KDELC2Q7Z4H8 507 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 SDR16C5Q8N3Y7 309 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 PAQR4Q8N4S7 273 aaPredicted RBP2.59□□□□□ -1.99
SRP54-204ENST00000553923 NKAPQ8N5F7 415 aaKnown RBP2.59□□□□□ -1.99
SRP54-204ENST00000553923 CCDC33Q8N5R6 958 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 GABPB2Q8TAK5 448 aaPredicted RBP2.59□□□□□ -1.99
SRP54-204ENST00000553923 DEPTORQ8TB45 409 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 KIAA1191Q96A73 305 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 PKP4Q99569 1192 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 C1QTNF5Q9BXJ0 243 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 WDR12Q9GZL7 423 aaKnown RBP2.59□□□□□ -1.99
SRP54-204ENST00000553923 SLC25A32Q9H2D1 315 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 TBC1D23Q9NUY8 699 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 ZNF69Q9UC07 566 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 B3GNT3Q9Y2A9 372 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 CEP83Q9Y592 693 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 PCDHGB2Q9Y5G2 931 aa2.59□□□□□ -1.99
SRP54-204ENST00000553923 A0A087WZ62 844 aa2.58□□□□□ -2
SRP54-204ENST00000553923 RRN3P2A6NIE6 340 aa2.58□□□□□ -2
SRP54-204ENST00000553923 J3KRW8 73 aa2.58□□□□□ -2
SRP54-204ENST00000553923 M0QZQ0 153 aa2.58□□□□□ -2
SRP54-204ENST00000553923 ANP32CO43423 234 aa2.58□□□□□ -2
SRP54-204ENST00000553923 NCK2O43639 380 aa2.58□□□□□ -2
SRP54-204ENST00000553923 PPP6R2O75170 966 aa2.58□□□□□ -2
SRP54-204ENST00000553923 PAK4O96013 591 aaPredicted RBP2.58□□□□□ -2
SRP54-204ENST00000553923 MT-ND5P03915 603 aa2.58□□□□□ -2
SRP54-204ENST00000553923 PRSS2P07478 247 aa2.58□□□□□ -2
SRP54-204ENST00000553923 RPL17P18621 184 aaKnown RBP2.58□□□□□ -2
SRP54-204ENST00000553923 MMP8P22894 467 aa2.58□□□□□ -2
SRP54-204ENST00000553923 TNFSF4P23510 183 aa2.58□□□□□ -2
SRP54-204ENST00000553923 DDIT3P35638 169 aa2.58□□□□□ -2
SRP54-204ENST00000553923 PIK3CBP42338 1070 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms