RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 ZFXP17010 805 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-208ENST00000553868 CHRNA3P32297 505 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 ARSEP51690 589 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 C19orf57Q0VDD7 668 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 ELF2Q15723 593 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 RAB6CQ53S08 254 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 HECTD3Q5T447 861 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 AADACL2Q6P093 401 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 KLHDC10Q6PID8 442 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 RFX6Q8HWS3 928 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 CCDC185Q8N715 623 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 CCDC26Q8TAB7 109 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 FAM71BQ8TC56 605 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 HHIPQ96QV1 700 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 NACA2Q9H009 215 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 RAB6CQ9H0N0 254 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 C8orf33Q9H7E9 229 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-208ENST00000553868 PCDH18Q9HCL0 1135 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 OSER1Q9NX31 292 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 MARCH2Q9P0N8 246 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 DNMT3LQ9UJW3 386 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 RAXQ9Y2V3 346 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 HECTD1Q9ULT8 2610 aa14.91□□□□□ -0.02
SHMT2-208ENST00000553868 UQCRHLA0A096LP55 91 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 CCDC163A0A0D9SF12 145 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 CTIFO43310 598 aaKnown RBP14.9□□□□□ -0.02
SHMT2-208ENST00000553868 PHF2O75151 1096 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 TUBBP07437 444 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 UQCRHP07919 91 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 L1CAMP32004 1257 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 HTR7P34969 479 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 ATP5C1P36542 298 aaKnown RBP14.9□□□□□ -0.02
SHMT2-208ENST00000553868 MLLT6P55198 1093 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-208ENST00000553868 TBX4P57082 545 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 FAM193AP78312 1265 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 EFEMP1Q12805 493 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 DPYSL3Q14195 570 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 TRIP4Q15650 581 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-208ENST00000553868 ZC3H12AQ5D1E8 599 aaKnown RBP14.9□□□□□ -0.02
SHMT2-208ENST00000553868 PPP6R3Q5H9R7 873 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-208ENST00000553868 KAZNQ674X7 775 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 C8orf74Q6P047 294 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 BBS12Q6ZW61 710 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 PDZD4Q76G19 769 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-208ENST00000553868 MAATS1Q7Z4T9 603 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 ADAT2Q7Z6V5 191 aaKnown RBP14.9□□□□□ -0.02
SHMT2-208ENST00000553868 YAF2Q8IY57 180 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 LEMD2Q8NC56 503 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 HAPLN3Q96S86 360 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 EPAS1Q99814 870 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 HEMGNQ9BXL5 484 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 TKTL2Q9H0I9 626 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 GPATCH2LQ9NWQ4 482 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 ARHGEF38Q9NXL2 777 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 CALCOCO1Q9P1Z2 691 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 SFMBT1Q9UHJ3 866 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 FEZ2Q9UHY8 353 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-208ENST00000553868 RASAL2Q9UJF2 1139 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 SLC8A2Q9UPR5 921 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 HBS1LQ9Y450 684 aaKnown RBP14.9□□□□□ -0.02
SHMT2-208ENST00000553868 MYO16Q9Y6X6 1858 aa14.9□□□□□ -0.02
SHMT2-208ENST00000553868 FAM221BA6H8Z2 402 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 APOL1O14791 398 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 RHOBTB1O94844 696 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 KRT10P13645 584 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 PLA2G2AP14555 144 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 PFKLP17858 780 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 CDC25CP30307 473 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 MAPK8P45983 427 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 FNTAP49354 379 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 PGFP49763 221 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 KLF1Q13351 362 aaPredicted RBP14.89□□□□□ -0.03
SHMT2-208ENST00000553868 EIF4EBP2Q13542 120 aaPredicted RBP14.89□□□□□ -0.03
SHMT2-208ENST00000553868 CCNG2Q16589 344 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 CYP1B1Q16678 543 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 RALGPS2Q86X27 583 aaPredicted RBP14.89□□□□□ -0.03
SHMT2-208ENST00000553868 UNC45BQ8IWX7 931 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 KLHL7Q8IXQ5 586 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 ATP6V0D2Q8N8Y2 350 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 PRELID2Q8N945 189 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 NOA1Q8NC60 698 aaKnown RBP14.89□□□□□ -0.03
SHMT2-208ENST00000553868 LRRN4CLQ8ND94 238 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 MDM1Q8TC05 714 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 MRPS31Q92665 395 aaKnown RBP14.89□□□□□ -0.03
SHMT2-208ENST00000553868 MAGOHBQ96A72 148 aaKnown RBP14.89□□□□□ -0.03
SHMT2-208ENST00000553868 FAF2Q96CS3 445 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 MSANTD3Q96H12 275 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 LRRC3BQ96PB8 259 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 RNF157Q96PX1 679 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 KRT12Q99456 494 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 OSBPL2Q9H1P3 480 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 ASAH2Q9NR71 780 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 STIM2Q9P246 746 aa14.89□□□□□ -0.03
SHMT2-208ENST00000553868 THADAQ6YHU6 1953 aa14.88□□□□□ -0.03
SHMT2-208ENST00000553868 SLC12A8A0AV02 714 aa14.88□□□□□ -0.03
SHMT2-208ENST00000553868 ZNF197O14709 1029 aa14.88□□□□□ -0.03
SHMT2-208ENST00000553868 CHADO15335 359 aa14.88□□□□□ -0.03
SHMT2-208ENST00000553868 CST8O60676 142 aa14.88□□□□□ -0.03
SHMT2-208ENST00000553868 CD48P09326 243 aa14.88□□□□□ -0.03
SHMT2-208ENST00000553868 MYL4P12829 197 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms