RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 MUC22E2RYF6 1773 aaPredicted RBP12.2□□□□□ -0.46
SRP54-203ENST00000553544 SPTA1P02549 2419 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 TBC1D3DA0A087WVF3 549 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 TBC1D3IA0A087WXS9 549 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 TBC1D3EA0A087X179 549 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 TBC1D3KA0A087X1G2 549 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 TARSL2A2RTX5 802 aaKnown RBP12.2□□□□□ -0.46
SRP54-203ENST00000553544 TBC1D3FA6NER0 549 aaPredicted RBP12.2□□□□□ -0.46
SRP54-203ENST00000553544 TBC1D3LB9A6J9 549 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 WNT9AO14904 365 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 MID1O15344 667 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 SART1O43290 800 aaKnown RBP12.2□□□□□ -0.46
SRP54-203ENST00000553544 MSI1O43347 362 aaKnown RBP12.2□□□□□ -0.46
SRP54-203ENST00000553544 THAP12O43422 761 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 MAGEC1O60732 1142 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 TBL1XO60907 577 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 SIN3BO75182 1162 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 ASLP04424 464 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 TBC1D3HP0C7X1 549 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 GOT1P17174 413 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 ACP1P24666 158 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 CD70P32970 193 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 CLCN1P35523 988 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 SLC11A2P49281 568 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 NXPH1P58417 271 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 INSM1Q01101 510 aaPredicted RBP12.2□□□□□ -0.46
SRP54-203ENST00000553544 KCNC4Q03721 635 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 ARID5BQ14865 1188 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 HNRNPA1L2Q32P51 320 aaKnown RBP12.2□□□□□ -0.46
SRP54-203ENST00000553544 HSP90AA4PQ58FG1 418 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 C9orf64Q5T6V5 341 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 PIK3R6Q5UE93 754 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 TBC1D3GQ6DHY5 549 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 TBC1D3CQ6IPX1 549 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 SND1Q7KZF4 910 aaKnown RBP eCLIP12.2□□□□□ -0.46
SRP54-203ENST00000553544 ERICH1Q86X53 443 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 MMAAQ8IVH4 418 aaKnown RBP12.2□□□□□ -0.46
SRP54-203ENST00000553544 TBC1D3Q8IZP1 549 aaPredicted RBP12.2□□□□□ -0.46
SRP54-203ENST00000553544 LSMEM2Q8N112 164 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 MFSD2AQ8NA29 543 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 KDM1BQ8NB78 822 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 FIBINQ8TAL6 211 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 ENOX1Q8TC92 643 aaKnown RBP12.2□□□□□ -0.46
SRP54-203ENST00000553544 AZIN2Q96A70 460 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 ZNF578Q96N58 590 aaPredicted RBP12.2□□□□□ -0.46
SRP54-203ENST00000553544 CLMPQ9H6B4 373 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 ST7Q9NRC1 585 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 SERGEFQ9UGK8 458 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 DNAJC12Q9UKB3 198 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 PCDHGC3Q9UN70 934 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 MYO18BQ8IUG5 2567 aa12.2□□□□□ -0.46
SRP54-203ENST00000553544 TMEM131Q92545 1883 aa12.19□□□□□ -0.46
SRP54-203ENST00000553544 B8ZZF3 427 aa12.19□□□□□ -0.46
SRP54-203ENST00000553544 E5RJQ4 531 aa12.19□□□□□ -0.46
SRP54-203ENST00000553544 FOXN3O00409 490 aaPredicted RBP12.19□□□□□ -0.46
SRP54-203ENST00000553544 IRAK2O43187 625 aa12.19□□□□□ -0.46
SRP54-203ENST00000553544 MT-CO3P00414 261 aa12.19□□□□□ -0.46
SRP54-203ENST00000553544 EEF1GP26641 437 aaKnown RBP12.19□□□□□ -0.46
SRP54-203ENST00000553544 USP8P40818 1118 aa12.19□□□□□ -0.46
SRP54-203ENST00000553544 PCBP4P57723 403 aaKnown RBP12.19□□□□□ -0.46
SRP54-203ENST00000553544 TMPRSS3P57727 454 aa12.19□□□□□ -0.46
SRP54-203ENST00000553544 PDCLQ13371 301 aa12.19□□□□□ -0.46
SRP54-203ENST00000553544 ZNF211Q13398 564 aaPredicted RBP12.19□□□□□ -0.46
SRP54-203ENST00000553544 NNTQ13423 1086 aa12.19□□□□□ -0.46
SRP54-203ENST00000553544 EIF4EBP2Q13542 120 aaPredicted RBP12.19□□□□□ -0.46
SRP54-203ENST00000553544 TCP11X2Q5H9J9 407 aa12.19□□□□□ -0.46
SRP54-203ENST00000553544 SFMBT2Q5VUG0 894 aa12.19□□□□□ -0.46
SRP54-203ENST00000553544 CDKAL1Q5VV42 579 aa12.19□□□□□ -0.46
SRP54-203ENST00000553544 SYPL2Q5VXT5 272 aa12.19□□□□□ -0.46
SRP54-203ENST00000553544 NUGGCQ68CJ6 796 aa12.19□□□□□ -0.46
SRP54-203ENST00000553544 KDM7AQ6ZMT4 941 aa12.19□□□□□ -0.46
SRP54-203ENST00000553544 PRPF39Q86UA1 669 aaKnown RBP12.19□□□□□ -0.46
SRP54-203ENST00000553544 CCDC117Q8IWD4 279 aaPredicted RBP12.19□□□□□ -0.46
SRP54-203ENST00000553544 UNC45BQ8IWX7 931 aa12.19□□□□□ -0.46
SRP54-203ENST00000553544 DHX40Q8IX18 779 aaKnown RBP12.19□□□□□ -0.46
SRP54-203ENST00000553544 FAM71AQ8IYT1 594 aa12.19□□□□□ -0.46
SRP54-203ENST00000553544 OR14C36Q8NHC7 312 aa12.19□□□□□ -0.46
SRP54-203ENST00000553544 DQX1Q8TE96 717 aaKnown RBP12.19□□□□□ -0.46
SRP54-203ENST00000553544 SLC39A13Q96H72 371 aa12.19□□□□□ -0.46
SRP54-203ENST00000553544 FCRL2Q96LA5 508 aaPredicted RBP12.19□□□□□ -0.46
SRP54-203ENST00000553544 NAA15Q9BXJ9 866 aaKnown RBP12.19□□□□□ -0.46
SRP54-203ENST00000553544 TJP2Q9UDY2 1190 aa12.19□□□□□ -0.46
SRP54-203ENST00000553544 NAALADL1Q9UQQ1 740 aa12.19□□□□□ -0.46
SRP54-203ENST00000553544 COL5A1P20908 1838 aaPredicted RBP12.18□□□□□ -0.46
SRP54-203ENST00000553544 HECTD1Q9ULT8 2610 aa12.18□□□□□ -0.46
SRP54-203ENST00000553544 ACSL4O60488 711 aa12.18□□□□□ -0.46
SRP54-203ENST00000553544 IGLV3-25P01717 112 aa12.18□□□□□ -0.46
SRP54-203ENST00000553544 SRPRAP08240 638 aaKnown RBP12.18□□□□□ -0.46
SRP54-203ENST00000553544 C5AR1P21730 350 aa12.18□□□□□ -0.46
SRP54-203ENST00000553544 CSKP41240 450 aa12.18□□□□□ -0.46
SRP54-203ENST00000553544 SGSHP51688 502 aa12.18□□□□□ -0.46
SRP54-203ENST00000553544 TBX4P57082 545 aa12.18□□□□□ -0.46
SRP54-203ENST00000553544 PTK2Q05397 1052 aa12.18□□□□□ -0.46
SRP54-203ENST00000553544 OVGP1Q12889 678 aa12.18□□□□□ -0.46
SRP54-203ENST00000553544 PROX2Q3B8N5 592 aa12.18□□□□□ -0.46
SRP54-203ENST00000553544 HS1BP3Q53T59 392 aa12.18□□□□□ -0.46
SRP54-203ENST00000553544 FAM133BQ5BKY9 247 aaKnown RBP12.18□□□□□ -0.46
SRP54-203ENST00000553544 ARHGAP40Q5TG30 622 aa12.18□□□□□ -0.46
SRP54-203ENST00000553544 KLHDC7AQ5VTJ3 777 aa12.18□□□□□ -0.46
SRP54-203ENST00000553544 RFWD3Q6PCD5 774 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms