RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, human

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-208	ENST00000550283	VPS51	Q9UID3	782 aa		11.51	□□□□□ -0.57
RAB5B-208	ENST00000550283	ANAPC7	Q9UJX3	599 aa		11.51	□□□□□ -0.57
RAB5B-208	ENST00000550283	AP4E1	Q9UPM8	1137 aa		11.51	□□□□□ -0.57
RAB5B-208	ENST00000550283	REXO2	Q9Y3B8	237 aa	Known RBP	11.51	□□□□□ -0.57
RAB5B-208	ENST00000550283	ABCA7	Q8IZY2	2146 aa		11.51	□□□□□ -0.57
RAB5B-208	ENST00000550283	CACNA1B	Q00975	2339 aa		11.51	□□□□□ -0.57
RAB5B-208	ENST00000550283	SDK1	Q7Z5N4	2213 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	IGHV1OR15-9	A0A0B4J2B8	117 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	TYW5	A2RUC4	315 aa	Known RBP	11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	SOWAHD	A6NJG2	315 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	PLK4	O00444	970 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	TIMM44	O43615	452 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	CREB3	O43889	395 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	AKR1B10	O60218	316 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	ZNF821	O75541	412 aa	Predicted RBP	11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	CD48	P09326	243 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	MYBL1	P10243	752 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	FECH	P22830	423 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	OR1E1	P30953	314 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	L1CAM	P32004	1257 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	RPS14	P62263	151 aa	Known RBP	11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	ARF5	P84085	180 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	SLC25A11	Q02978	314 aa	Known RBP	11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	HNRNPA1L2	Q32P51	320 aa	Known RBP	11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	KIAA1324	Q6UXG2	1013 aa	Known RBP	11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	RAD9B	Q6WBX8	426 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	NUDT18	Q6ZVK8	323 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	TRMT11	Q7Z4G4	463 aa	Known RBP	11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	TMPRSS6	Q8IU80	811 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	CNGA4	Q8IV77	575 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	PGBD3	Q8N328	593 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	NPW	Q8N729	165 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	SPC24	Q8NBT2	197 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	ZNF564	Q8TBZ8	553 aa	Predicted RBP	11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	PTPRN2	Q92932	1015 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	TBC1D31	Q96DN5	1066 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	PPP1R9B	Q96SB3	815 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	IRF2BPL	Q9H1B7	796 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	DHX35	Q9H5Z1	703 aa	Known RBP	11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	ZWILCH	Q9H900	591 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	POLM	Q9NP87	494 aa	Predicted RBP	11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	ETNK2	Q9NVF9	386 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	TMEM248	Q9NWD8	314 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	BCCIP	Q9P287	314 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	VPS28	Q9UK41	221 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	USP18	Q9UMW8	372 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	CYP8B1	Q9UNU6	501 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	SLCO1B1	Q9Y6L6	691 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	SCIN	Q9Y6U3	715 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	EP300	Q09472	2414 aa	Predicted RBP	11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	GVINP1	Q7Z2Y8	2422 aa		11.5	□□□□□ -0.57
RAB5B-208	ENST00000550283	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	TMEM110-MUSTN1	A8MSY1	372 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	ATP5B	P06576	529 aa	Known RBP	11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	RARA	P10276	462 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	SRC	P12931	536 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	RHOQ	P17081	205 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	GOT1	P17174	413 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	PTGER3	P43115	390 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	GNA12	Q03113	381 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	MMRN1	Q13201	1228 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	ARL13B	Q3SXY8	428 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	EFHC2	Q5JST6	749 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	FAM182A	Q5T1J6	154 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	PPP1R2P3	Q6NXS1	205 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	ZC3H14	Q6PJT7	736 aa	Known RBP	11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	LRRC31	Q6UY01	552 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283		Q6ZVU0	165 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	CEP68	Q76N32	757 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	ARMCX6	Q7L4S7	300 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	VPS36	Q86VN1	386 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	SLC41A1	Q8IVJ1	513 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	TMEFF1	Q8IYR6	380 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	STK40	Q8N2I9	435 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	NIPA2	Q8N8Q9	360 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	CHST14	Q8NCH0	376 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	OR2T3	Q8NH03	318 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	CCDC26	Q8TAB7	109 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	UCMA	Q8WVF2	138 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	ARHGEF2	Q92974	986 aa	Known RBP	11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	TRIM11	Q96F44	468 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	SPON2	Q9BUD6	331 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	ACE2	Q9BYF1	805 aa	Predicted RBP	11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	MUC3B	Q9H195	1237 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	TNKS2	Q9H2K2	1166 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	GOLPH3	Q9H4A6	298 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	PRDM16	Q9HAZ2	1276 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	RXFP3	Q9NSD7	469 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	KLHL11	Q9NVR0	708 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	CWC15	Q9P013	229 aa	Known RBP	11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	USP36	Q9P275	1121 aa	Known RBP	11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	SALL4	Q9UJQ4	1053 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	SARDH	Q9UL12	918 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	PLA2G4C	Q9UP65	541 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	HYOU1	Q9Y4L1	999 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	PAXBP1	Q9Y5B6	917 aa		11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	RIF1	Q5UIP0	2472 aa	Known RBP	11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	NYNRIN	Q9P2P1	1898 aa	Known RBP	11.49	□□□□□ -0.57
RAB5B-208	ENST00000550283	ILVBL	A1L0T0	632 aa		11.48	□□□□□ -0.57
RAB5B-208	ENST00000550283	ATP9B	O43861	1147 aa		11.48	□□□□□ -0.57

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