RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 SRGAP2O75044 1071 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 OR1E1P30953 314 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 ETFBP38117 255 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 SLC1A1P43005 524 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 CLCN6P51797 869 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 ECT2LQ008S8 904 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 NHLH1Q02575 133 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 GNA12Q03113 381 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 DMWDQ09019 674 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 SPA17Q15506 151 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 HNRNPA1L2Q32P51 320 aaKnown RBP12.21□□□□□ -0.45
PFDN5-208ENST00000549995 RNF219Q5W0B1 726 aaPredicted RBP12.21□□□□□ -0.45
PFDN5-208ENST00000549995 SDE2Q6IQ49 451 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 C11orf63Q6NUN7 778 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 ZC3H14Q6PJT7 736 aaKnown RBP12.21□□□□□ -0.45
PFDN5-208ENST00000549995 TSSK4Q6SA08 328 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 RFX8Q6ZV50 586 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 TFAP2DQ7Z6R9 452 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 CCDC33Q8N5R6 958 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 SPC24Q8NBT2 197 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 MDGA1Q8NFP4 955 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 TSTD1Q8NFU3 115 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 FRS2Q8WU20 508 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 SORCS1Q8WY21 1168 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 ARHGEF2Q92974 986 aaKnown RBP12.21□□□□□ -0.45
PFDN5-208ENST00000549995 FAF2Q96CS3 445 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 PDLIM2Q96JY6 352 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 HHIPQ96QV1 700 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 C2orf49Q9BVC5 232 aaPredicted RBP12.21□□□□□ -0.45
PFDN5-208ENST00000549995 EPC1Q9H2F5 836 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 DHX35Q9H5Z1 703 aaKnown RBP12.21□□□□□ -0.45
PFDN5-208ENST00000549995 CATSPERBQ9H7T0 1116 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 ZDHHC4Q9NPG8 344 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 POLR3BQ9NW08 1133 aaPredicted RBP12.21□□□□□ -0.45
PFDN5-208ENST00000549995 GPATCH2LQ9NWQ4 482 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 DONSONQ9NYP3 566 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 PCSK1NQ9UHG2 260 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 VPS51Q9UID3 782 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 CEP192Q8TEP8 1941 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 A0A0D9SEW6 157 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 C10orf142B7Z368 130 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 EEF2KO00418 725 aaKnown RBP12.2□□□□□ -0.46
PFDN5-208ENST00000549995 DCLK1O15075 740 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 ARHGAP6O43182 974 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 ALDH1A2O94788 518 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 CD160O95971 181 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 IGLV3-19P01714 112 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 GABRG2P18507 467 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 IL4RP24394 825 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 EPHB2P29323 1055 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 CTSOP43234 321 aaPredicted RBP12.2□□□□□ -0.46
PFDN5-208ENST00000549995 MRE11P49959 708 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 NDST2P52849 883 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 TAS2R40P59535 323 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 TPI1P60174 286 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 KRT83P78385 493 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 ARF5P84085 180 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 HADHQ16836 314 aaKnown RBP12.2□□□□□ -0.46
PFDN5-208ENST00000549995 PARP15Q460N3 678 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 KIAA1211LQ6NV74 962 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 SERPINA13PQ6UXR4 307 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 ZNF662Q6ZS27 426 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 CPNE8Q86YQ8 564 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 SH2D3CQ8N5H7 860 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 CYB5D2Q8WUJ1 264 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 ZNF670Q9BS34 389 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 PCDH18Q9HCL0 1135 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.2□□□□□ -0.46
PFDN5-208ENST00000549995 CWC15Q9P013 229 aaKnown RBP12.2□□□□□ -0.46
PFDN5-208ENST00000549995 SUN2Q9UH99 717 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 SALL4Q9UJQ4 1053 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 PLA2G4CQ9UP65 541 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 ZNF292O60281 2723 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 NUP205Q92621 2012 aa12.2□□□□□ -0.46
PFDN5-208ENST00000549995 EDDM13A0A1B0GTR0 161 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 TCRBV21S2A2A0A5A6 115 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 WASH3PC4AMC7 463 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 H3BRJ5 948 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 AXIN1O15169 862 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 RAMP2O60895 175 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 IPO7O95373 1038 aaKnown RBP12.19□□□□□ -0.46
PFDN5-208ENST00000549995 KRT7P08729 469 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 SRCP12931 536 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 GOT1P17174 413 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 NDUFV2P19404 249 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 FNTBP49356 437 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 CCZ1BP86790 482 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 CCZ1P86791 482 aaPredicted RBP12.19□□□□□ -0.46
PFDN5-208ENST00000549995 ZBTB16Q05516 673 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 SLC20A2Q08357 652 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 STARD3Q14849 445 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 PDK2Q15119 407 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 TAZQ16635 292 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 KCNT1Q5JUK3 1230 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 RWDD4Q6NW29 188 aaKnown RBP12.19□□□□□ -0.46
PFDN5-208ENST00000549995 ARHGAP12Q8IWW6 846 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 PLPP6Q8IY26 295 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 TXLNBQ8N3L3 684 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 LZTR1Q8N653 840 aa12.19□□□□□ -0.46
PFDN5-208ENST00000549995 ACRBPQ8NEB7 543 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms