RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 ITGA2BP08514 1039 aa12.99□□□□□ -0.33
SCAF11-209ENST00000547018 NQO1P15559 274 aaKnown RBP12.99□□□□□ -0.33
SCAF11-209ENST00000547018 SERPINB6P35237 376 aa12.99□□□□□ -0.33
SCAF11-209ENST00000547018 CNGA3Q16281 694 aa12.99□□□□□ -0.33
SCAF11-209ENST00000547018 TEX44Q53QW1 395 aa12.99□□□□□ -0.33
SCAF11-209ENST00000547018 PLD6Q8N2A8 252 aaKnown RBP12.99□□□□□ -0.33
SCAF11-209ENST00000547018 DCLK2Q8N568 766 aa12.99□□□□□ -0.33
SCAF11-209ENST00000547018 OR6P1Q8NGX9 317 aa12.99□□□□□ -0.33
SCAF11-209ENST00000547018 PDCD6IPQ8WUM4 868 aaKnown RBP12.99□□□□□ -0.33
SCAF11-209ENST00000547018 LINC01599Q8WXQ3 324 aa12.99□□□□□ -0.33
SCAF11-209ENST00000547018 MTO1Q9Y2Z2 717 aaKnown RBP12.99□□□□□ -0.33
SCAF11-209ENST00000547018 ITM2AO43736 263 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 F9P00740 461 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 ALDOAP04075 364 aaKnown RBP12.98□□□□□ -0.33
SCAF11-209ENST00000547018 CCR10P46092 362 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 TM4SF4P48230 202 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 NOGQ13253 232 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 PTPRCAPQ14761 206 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 RYBPQ8N488 228 aaPredicted RBP12.98□□□□□ -0.33
SCAF11-209ENST00000547018 POU5F2Q8N7G0 328 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 KLHDC9Q8NEP7 349 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 AUTS2Q8WXX7 1259 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 EXT2Q93063 718 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 OMDQ99983 421 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 CCSER2Q9H7U1 834 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 HMX1Q9NP08 348 aaPredicted RBP12.98□□□□□ -0.33
SCAF11-209ENST00000547018 TMEM216Q9P0N5 145 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 PLLPQ9Y342 182 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.98□□□□□ -0.33
SCAF11-209ENST00000547018 LOC100653049A0A140TA62 436 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 TSPAN3O60637 253 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 KRT34O76011 436 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 MX2P20592 715 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 RAB27AP51159 221 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 PDE1CQ14123 709 aaPredicted RBP12.98□□□□□ -0.33
SCAF11-209ENST00000547018 PRKD1Q15139 912 aaPredicted RBP12.98□□□□□ -0.33
SCAF11-209ENST00000547018 ALFQ53S48 1182 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 CES4AQ5XG92 561 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 KIRREL3Q8IZU9 778 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 ZNF512Q96ME7 567 aaPredicted RBP12.98□□□□□ -0.33
SCAF11-209ENST00000547018 EBF4Q9BQW3 602 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 CRISPLD1Q9H336 500 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 CDY1Q9Y6F8 540 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 A0A0U1RQS6 177 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 DIAPH2O60879 1101 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 SPAG6O75602 509 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 NCF2P19878 526 aaPredicted RBP12.98□□□□□ -0.33
SCAF11-209ENST00000547018 PAPOLAP51003 745 aaKnown RBP12.98□□□□□ -0.33
SCAF11-209ENST00000547018 STX3Q13277 289 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 PRPSAP1Q14558 356 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 ESRP1Q6NXG1 681 aaKnown RBP12.98□□□□□ -0.33
SCAF11-209ENST00000547018 LRRC8BQ6P9F7 803 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 BHLHA9Q7RTU4 235 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 C10orf107Q8IVU9 208 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 EFCAB3Q8N7B9 438 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.98□□□□□ -0.33
SCAF11-209ENST00000547018 MCUQ8NE86 351 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 NT5C3BQ969T7 300 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 RTP4Q96DX8 246 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 ZNF419Q96HQ0 510 aaPredicted RBP12.98□□□□□ -0.33
SCAF11-209ENST00000547018 NDNQ99608 321 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 OXCT2Q9BYC2 517 aaPredicted RBP12.98□□□□□ -0.33
SCAF11-209ENST00000547018 ARL8BQ9NVJ2 186 aa12.98□□□□□ -0.33
SCAF11-209ENST00000547018 IPO11Q9UI26 975 aaKnown RBP12.98□□□□□ -0.33
SCAF11-209ENST00000547018 SCN10AQ9Y5Y9 1956 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 GOLGA8QA0A0J9YX86 632 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 GOLGA8OA6NCC3 632 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 GOLGA8NF8WBI6 632 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 SMAPO00193 183 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 TM9SF1O15321 606 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 IRAK2O43187 625 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 ZNF623O75123 536 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 ALDH2P05091 517 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 PGAM1P18669 254 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 TPSB2P20231 275 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 CDC25CP30307 473 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 HOXC8P31273 242 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 CYP2C18P33260 490 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 KCNQ1P51787 676 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 TBX4P57082 545 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 MPP1Q00013 466 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 PEX6Q13608 980 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 USP10Q14694 798 aaKnown RBP12.97□□□□□ -0.33
SCAF11-209ENST00000547018 TPSAB1Q15661 275 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 RSPO2Q6UXX9 243 aaPredicted RBP12.97□□□□□ -0.33
SCAF11-209ENST00000547018 LONP2Q86WA8 852 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 CHSY1Q86X52 802 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 NAT14Q8WUY8 206 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 ALKBH8Q96BT7 664 aaKnown RBP12.97□□□□□ -0.33
SCAF11-209ENST00000547018 SUSD3Q96L08 255 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 ABCC13Q9NSE7 274 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 DNAJC16Q9Y2G8 782 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 STARD13Q9Y3M8 1113 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 HACD1B0YJ81 288 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 HAUS5O94927 633 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 HAPLN1P10915 354 aaPredicted RBP12.97□□□□□ -0.33
SCAF11-209ENST00000547018 SP100P23497 879 aaPredicted RBP12.97□□□□□ -0.33
SCAF11-209ENST00000547018 BNIP1Q12981 228 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 USP4Q13107 963 aa12.97□□□□□ -0.33
SCAF11-209ENST00000547018 ANKRD20A4Q4UJ75 823 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms