RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 KCNT1Q5JUK3 1230 aa14.84□□□□□ -0.03
DDX54-203ENST00000546869 DAB2IPQ5VWQ8 1189 aa14.84□□□□□ -0.03
DDX54-203ENST00000546869 TXNRD3NBQ6F5E7 133 aa14.84□□□□□ -0.03
DDX54-203ENST00000546869 SERPINA13PQ6UXR4 307 aa14.84□□□□□ -0.03
DDX54-203ENST00000546869 METTL3Q86U44 580 aaKnown RBP14.84□□□□□ -0.03
DDX54-203ENST00000546869 VSIG1Q86XK7 387 aa14.84□□□□□ -0.03
DDX54-203ENST00000546869 TSC1Q92574 1164 aa14.84□□□□□ -0.03
DDX54-203ENST00000546869 PSMB7Q99436 277 aa14.84□□□□□ -0.03
DDX54-203ENST00000546869 FBRSQ9HAH7 460 aa14.84□□□□□ -0.03
DDX54-203ENST00000546869 NDFIP2Q9NV92 336 aa14.84□□□□□ -0.03
DDX54-203ENST00000546869 GPATCH2LQ9NWQ4 482 aa14.84□□□□□ -0.03
DDX54-203ENST00000546869 CWC15Q9P013 229 aaKnown RBP14.84□□□□□ -0.03
DDX54-203ENST00000546869 VPS28Q9UK41 221 aa14.84□□□□□ -0.03
DDX54-203ENST00000546869 HS3ST2Q9Y278 367 aa14.84□□□□□ -0.03
DDX54-203ENST00000546869 A0A0D9SEW6 157 aa14.83□□□□□ -0.04
DDX54-203ENST00000546869 TARSL2A2RTX5 802 aaKnown RBP14.83□□□□□ -0.04
DDX54-203ENST00000546869 RCCD1A6NED2 376 aa14.83□□□□□ -0.04
DDX54-203ENST00000546869 ATP9BO43861 1147 aa14.83□□□□□ -0.04
DDX54-203ENST00000546869 SYNCRIPO60506 623 aaKnown RBP14.83□□□□□ -0.04
DDX54-203ENST00000546869 ZMPSTE24O75844 475 aa14.83□□□□□ -0.04
DDX54-203ENST00000546869 EPHX1P07099 455 aa14.83□□□□□ -0.04
DDX54-203ENST00000546869 IL4RP24394 825 aa14.83□□□□□ -0.04
DDX54-203ENST00000546869 ARL4AP40617 200 aa14.83□□□□□ -0.04
DDX54-203ENST00000546869 NBL1P41271 181 aa14.83□□□□□ -0.04
DDX54-203ENST00000546869 NOP2P46087 812 aaKnown RBP14.83□□□□□ -0.04
DDX54-203ENST00000546869 CLCN6P51797 869 aa14.83□□□□□ -0.04
DDX54-203ENST00000546869 NDST2P52849 883 aa14.83□□□□□ -0.04
DDX54-203ENST00000546869 CAMK2GQ13555 558 aaPredicted RBP14.83□□□□□ -0.04
DDX54-203ENST00000546869 DPYSQ14117 519 aa14.83□□□□□ -0.04
DDX54-203ENST00000546869 HNRNPA1L2Q32P51 320 aaKnown RBP14.83□□□□□ -0.04
DDX54-203ENST00000546869 C11orf63Q6NUN7 778 aa14.83□□□□□ -0.04
DDX54-203ENST00000546869 ZC3H14Q6PJT7 736 aaKnown RBP14.83□□□□□ -0.04
DDX54-203ENST00000546869 TSSK4Q6SA08 328 aa14.83□□□□□ -0.04
DDX54-203ENST00000546869 MAP7D3Q8IWC1 876 aa14.83□□□□□ -0.04
DDX54-203ENST00000546869 LZTR1Q8N653 840 aa14.83□□□□□ -0.04
DDX54-203ENST00000546869 CYB5D2Q8WUJ1 264 aa14.83□□□□□ -0.04
DDX54-203ENST00000546869 ARHGEF2Q92974 986 aaKnown RBP14.83□□□□□ -0.04
DDX54-203ENST00000546869 SEMA4AQ9H3S1 761 aa14.83□□□□□ -0.04
DDX54-203ENST00000546869 ZDHHC4Q9NPG8 344 aa14.83□□□□□ -0.04
DDX54-203ENST00000546869 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.83□□□□□ -0.04
DDX54-203ENST00000546869 POLR3BQ9NW08 1133 aaPredicted RBP14.83□□□□□ -0.04
DDX54-203ENST00000546869 ALG6Q9Y672 507 aa14.83□□□□□ -0.04
DDX54-203ENST00000546869 ZNF487B1APH4 448 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 H3BRJ5 948 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 ZBTB24O43167 697 aaPredicted RBP14.82□□□□□ -0.04
DDX54-203ENST00000546869 DAPK3O43293 454 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 RAMP2O60895 175 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 GOT1P17174 413 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 ERCC2P18074 760 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 PRKCHP24723 683 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 WASP42768 502 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 CTSOP43234 321 aaPredicted RBP14.82□□□□□ -0.04
DDX54-203ENST00000546869 TAS2R40P59535 323 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 GSE1Q14687 1217 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 POLD3Q15054 466 aaPredicted RBP14.82□□□□□ -0.04
DDX54-203ENST00000546869 SMTNL2Q2TAL5 461 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 PARP15Q460N3 678 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 FNDC3BQ53EP0 1204 aaKnown RBP14.82□□□□□ -0.04
DDX54-203ENST00000546869 PPP6R3Q5H9R7 873 aaPredicted RBP14.82□□□□□ -0.04
DDX54-203ENST00000546869 AFMIDQ63HM1 303 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 RETSATQ6NUM9 610 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 KIAA1211LQ6NV74 962 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 ACRBPQ8NEB7 543 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 FRS2Q8WU20 508 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 UBE2Q2Q8WVN8 375 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 ATRIPQ8WXE1 791 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 HSPH1Q92598 858 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 ANP32BQ92688 251 aaKnown RBP14.82□□□□□ -0.04
DDX54-203ENST00000546869 ATOH1Q92858 354 aaPredicted RBP14.82□□□□□ -0.04
DDX54-203ENST00000546869 HHIPQ96QV1 700 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 LACRTQ9GZZ8 138 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 KLC2Q9H0B6 622 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 NOL6Q9H6R4 1146 aaKnown RBP14.82□□□□□ -0.04
DDX54-203ENST00000546869 PCDH18Q9HCL0 1135 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 ATP13A1Q9HD20 1204 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 DNAI1Q9UI46 699 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 VPS51Q9UID3 782 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 SLCO3A1Q9UIG8 710 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 SLC25A13Q9UJS0 675 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 DOCK4Q8N1I0 1966 aa14.82□□□□□ -0.04
DDX54-203ENST00000546869 EDDM13A0A1B0GTR0 161 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 TCRBV21S2A2A0A5A6 115 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 ZSCAN5CA6NGD5 496 aaPredicted RBP14.81□□□□□ -0.04
DDX54-203ENST00000546869 PROB1E7EW31 1015 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 AXIN1O15169 862 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 KDELR3O43731 214 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 NRDCO43847 1150 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 BUB1BO60566 1050 aaPredicted RBP14.81□□□□□ -0.04
DDX54-203ENST00000546869 GABRG2P18507 467 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 COMTP21964 271 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 SSR1P43307 286 aaKnown RBP14.81□□□□□ -0.04
DDX54-203ENST00000546869 CDH6P55285 790 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 GEMIN4P57678 1058 aaKnown RBP14.81□□□□□ -0.04
DDX54-203ENST00000546869 KIF5AQ12840 1032 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 ATP13A4Q4VNC1 1196 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 ZNF662Q6ZS27 426 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 RHOT1Q8IXI2 618 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 SH2D3CQ8N5H7 860 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 KCTD6Q8NC69 237 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 MDGA1Q8NFP4 955 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms