RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 SCAMP1O15126 338 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 IRAK2O43187 625 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 SLC7A4O43246 635 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 PLRG1O43660 514 aaKnown RBP9.56□□□□□ -0.88
SSH1-205ENST00000546812 RNGTTO60942 597 aaKnown RBP9.56□□□□□ -0.88
SSH1-205ENST00000546812 RTN2O75298 545 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 PIAS2O75928 621 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 TNFSF15O95150 251 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 FAM87AP0C7U9 286 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 THEGLP0DJG4 465 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 PTMSP20962 102 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 TGM2P21980 687 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 MZF1P28698 734 aaPredicted RBP9.56□□□□□ -0.88
SSH1-205ENST00000546812 CTSOP43234 321 aaPredicted RBP9.56□□□□□ -0.88
SSH1-205ENST00000546812 TKTL1P51854 596 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 DLG4P78352 724 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 TLE1Q04724 770 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 ELAVL3Q14576 367 aaKnown RBP9.56□□□□□ -0.88
SSH1-205ENST00000546812 SETMARQ53H47 684 aaPredicted RBP9.56□□□□□ -0.88
SSH1-205ENST00000546812 ISM2Q6H9L7 571 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 USP53Q70EK8 1073 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 SV2AQ7L0J3 742 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 BHLHA9Q7RTU4 235 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 ELOA2Q8IYF1 753 aaPredicted RBP9.56□□□□□ -0.88
SSH1-205ENST00000546812 TMEM145Q8NBT3 493 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 SPATA20Q8TB22 786 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 IFI44Q8TCB0 444 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 RNF139Q8WU17 664 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 NDRG1Q92597 394 aaKnown RBP9.56□□□□□ -0.88
SSH1-205ENST00000546812 PTPRN2Q92932 1015 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 EXTL1Q92935 676 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 SGF29Q96ES7 293 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 DUSP23Q9BVJ7 150 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 STIM2Q9P246 746 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 SLCO3A1Q9UIG8 710 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 CA5BQ9Y2D0 317 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 ENTPD2Q9Y5L3 495 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 CREBBPQ92793 2442 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 ITIH6Q6UXX5 1313 aa9.56□□□□□ -0.88
SSH1-205ENST00000546812 NBASA2RRP1 2371 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 PMS2P1A4D2B8 440 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 IKBKBO14920 756 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 HLA-DRAP01903 254 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 CD58P19256 250 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 CR2P20023 1033 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 SLC6A4P31645 630 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 SLC11A2P49281 568 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 METAP1P53582 386 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 SLC8A3P57103 927 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 ECT2LQ008S8 904 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 NFKBIBQ15653 356 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 KNOP1Q1ED39 458 aaKnown RBP9.55□□□□□ -0.88
SSH1-205ENST00000546812 POM121L1PQ3SYA9 428 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 C4orf17Q53FE4 359 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 FAM133BQ5BKY9 247 aaKnown RBP9.55□□□□□ -0.88
SSH1-205ENST00000546812 FSCBQ5H9T9 825 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 PITRM1Q5JRX3 1037 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 CCDC183Q5T5S1 534 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 BSPRYQ5W0U4 402 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 CAVIN1Q6NZI2 390 aaKnown RBP9.55□□□□□ -0.88
SSH1-205ENST00000546812 FOXR1Q6PIV2 292 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 RBM44Q6ZP01 1051 aaKnown RBP9.55□□□□□ -0.88
SSH1-205ENST00000546812 HJURPQ8NCD3 748 aaPredicted RBP9.55□□□□□ -0.88
SSH1-205ENST00000546812 TPCN2Q8NHX9 752 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 WDR36Q8NI36 951 aaKnown RBP9.55□□□□□ -0.88
SSH1-205ENST00000546812 GOLGA5Q8TBA6 731 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 EDEM1Q92611 657 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 ARRDC3Q96B67 414 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 IFT43Q96FT9 208 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 HEXIM2Q96MH2 286 aaKnown RBP9.55□□□□□ -0.88
SSH1-205ENST00000546812 GSDMAQ96QA5 445 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 ULBP1Q9BZM6 244 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 APOBEC3GQ9HC16 384 aaKnown RBP9.55□□□□□ -0.88
SSH1-205ENST00000546812 TMEM63CQ9P1W3 806 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 MAPK8IP1Q9UQF2 711 aa9.55□□□□□ -0.88
SSH1-205ENST00000546812 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.54□□□□□ -0.88
SSH1-205ENST00000546812 CLEC18AA5D8T8 446 aa9.54□□□□□ -0.88
SSH1-205ENST00000546812 RIOK3O14730 519 aaKnown RBP9.54□□□□□ -0.88
SSH1-205ENST00000546812 MSI1O43347 362 aaKnown RBP9.54□□□□□ -0.88
SSH1-205ENST00000546812 NOBOXO60393 691 aa9.54□□□□□ -0.88
SSH1-205ENST00000546812 ACSL4O60488 711 aa9.54□□□□□ -0.88
SSH1-205ENST00000546812 TCEA3O75764 348 aa9.54□□□□□ -0.88
SSH1-205ENST00000546812 MOCS3O95396 460 aa9.54□□□□□ -0.88
SSH1-205ENST00000546812 IGLV3-27P01718 113 aa9.54□□□□□ -0.88
SSH1-205ENST00000546812 ITGA2BP08514 1039 aa9.54□□□□□ -0.88
SSH1-205ENST00000546812 PIK3CAP42336 1068 aa9.54□□□□□ -0.88
SSH1-205ENST00000546812 RPS24P62847 133 aaKnown RBP9.54□□□□□ -0.88
SSH1-205ENST00000546812 ZNF177Q13360 481 aaPredicted RBP9.54□□□□□ -0.88
SSH1-205ENST00000546812 CDH18Q13634 790 aa9.54□□□□□ -0.88
SSH1-205ENST00000546812 MORC3Q14149 939 aa9.54□□□□□ -0.88
SSH1-205ENST00000546812 CDKN3Q16667 212 aa9.54□□□□□ -0.88
SSH1-205ENST00000546812 KLHL40Q2TBA0 621 aa9.54□□□□□ -0.88
SSH1-205ENST00000546812 ZNF394Q53GI3 561 aa9.54□□□□□ -0.88
SSH1-205ENST00000546812 ZNF658Q5TYW1 1059 aaPredicted RBP9.54□□□□□ -0.88
SSH1-205ENST00000546812 FAM46CQ5VWP2 391 aa9.54□□□□□ -0.88
SSH1-205ENST00000546812 RNF219Q5W0B1 726 aaPredicted RBP9.54□□□□□ -0.88
SSH1-205ENST00000546812 NUGGCQ68CJ6 796 aa9.54□□□□□ -0.88
SSH1-205ENST00000546812 ZCCHC8Q6NZY4 707 aaKnown RBP9.54□□□□□ -0.88
SSH1-205ENST00000546812 CLEC18BQ6UXF7 455 aa9.54□□□□□ -0.88
SSH1-205ENST00000546812 MMS22LQ6ZRQ5 1243 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms