RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 PLD6Q8N2A8 252 aaKnown RBP8.93□□□□□ -0.98
TDP1-204ENST00000545686 CNTD1Q8N815 330 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 URGCPQ8TCY9 931 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 TRAPPC12Q8WVT3 735 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 KBTBD7Q8WVZ9 684 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 JDP2Q8WYK2 163 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 MCMBPQ9BTE3 642 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 OCEL1Q9H607 264 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 MAN1C1Q9NR34 630 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 ZNF358Q9NW07 568 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 NSMCE4AQ9NXX6 385 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.93□□□□□ -0.98
TDP1-204ENST00000545686 HACD3Q9P035 362 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 GOLGB1Q14789 3259 aaKnown RBP8.93□□□□□ -0.98
TDP1-204ENST00000545686 CABYRO75952 493 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 AP2A1O95782 977 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 SPATA31D3P0C874 917 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 CYP2C9P11712 490 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 ARF4P18085 180 aaPredicted RBP8.93□□□□□ -0.98
TDP1-204ENST00000545686 ME2P23368 584 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 SERPINB5P36952 375 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 MLH1P40692 756 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 CSRP3P50461 194 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 RPL14P50914 215 aaKnown RBP8.93□□□□□ -0.98
TDP1-204ENST00000545686 NR1H2P55055 460 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 MRPS22P82650 360 aaKnown RBP8.93□□□□□ -0.98
TDP1-204ENST00000545686 MYBPC1Q00872 1141 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 SPATA31D4Q6ZUB0 917 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 APOBEC3FQ8IUX4 373 aaKnown RBP8.93□□□□□ -0.98
TDP1-204ENST00000545686 TNS4Q8IZW8 715 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 ZNF567Q8N184 647 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 LRRC52Q8N7C0 313 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 ANKRD52Q8NB46 1076 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 TOP1MTQ969P6 601 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 ZNF669Q96BR6 464 aaPredicted RBP8.93□□□□□ -0.98
TDP1-204ENST00000545686 MRPL45Q9BRJ2 306 aaKnown RBP8.93□□□□□ -0.98
TDP1-204ENST00000545686 GATA5Q9BWX5 397 aaPredicted RBP8.93□□□□□ -0.98
TDP1-204ENST00000545686 B3GNT5Q9BYG0 378 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 SLC2A11Q9BYW1 496 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 MRPL40Q9NQ50 206 aaKnown RBP8.93□□□□□ -0.98
TDP1-204ENST00000545686 FAM49BQ9NUQ9 324 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 VANGL2Q9ULK5 521 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 CDYLQ9Y232 598 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 MFHAS1Q9Y4C4 1052 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 DICER1Q9UPY3 1922 aaKnown RBP8.92□□□□□ -0.98
TDP1-204ENST00000545686 ZCWPW2A0A1B0GU75 182 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 MAGEB16A2A368 324 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 XRCC1P18887 633 aaPredicted RBP8.92□□□□□ -0.98
TDP1-204ENST00000545686 MATKP42679 507 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 PSMD8P48556 350 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 ATXN1P54253 815 aaKnown RBP8.92□□□□□ -0.98
TDP1-204ENST00000545686 DPYSQ14117 519 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 SOWAHAQ2M3V2 549 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 LSM12Q3MHD2 195 aaKnown RBP8.92□□□□□ -0.98
TDP1-204ENST00000545686 SLC25A52Q3SY17 297 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 BSPRYQ5W0U4 402 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 ZNF410Q86VK4 478 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 METTL25Q8N6Q8 603 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 EFCAB3Q8N7B9 438 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 LINC01465Q8N7H1 131 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 RNF139Q8WU17 664 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 PDCD6IPQ8WUM4 868 aaKnown RBP8.92□□□□□ -0.98
TDP1-204ENST00000545686 GFM2Q969S9 779 aaKnown RBP8.92□□□□□ -0.98
TDP1-204ENST00000545686 KLRG1Q96E93 195 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 KIF12Q96FN5 646 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 ZNF668Q96K58 619 aaPredicted RBP8.92□□□□□ -0.98
TDP1-204ENST00000545686 HSFY1Q96LI6 401 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 SPATA33Q96N06 139 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 FCRL3Q96P31 734 aaPredicted RBP8.92□□□□□ -0.98
TDP1-204ENST00000545686 AGAP3Q96P47 875 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 CDRT15Q96T59 188 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 HAUS8Q9BT25 410 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 DNAI2Q9GZS0 605 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 WDR41Q9HAD4 459 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 EFCAB1Q9HAE3 211 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 ZBTB26Q9HCK0 441 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 CASS4Q9NQ75 786 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 BFARQ9NZS9 450 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 MYLKQ15746 1914 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.92□□□□□ -0.98
TDP1-204ENST00000545686 C2P06681 752 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 COL6A2P12110 1019 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 DPEP1P16444 411 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 MPSTP25325 297 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 GRM5P41594 1212 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 HPCAP84074 193 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 NSUN2Q08J23 767 aaKnown RBP eCLIP8.92□□□□□ -0.98
TDP1-204ENST00000545686 MPP3Q13368 585 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 ANO4Q32M45 955 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 MICALL2Q8IY33 904 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 BHLHE22Q8NFJ8 381 aaPredicted RBP8.92□□□□□ -0.98
TDP1-204ENST00000545686 RCN3Q96D15 328 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 TSNARE1Q96NA8 513 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 ACE2Q9BYF1 805 aaPredicted RBP8.92□□□□□ -0.98
TDP1-204ENST00000545686 SENP6Q9GZR1 1112 aaPredicted RBP8.92□□□□□ -0.98
TDP1-204ENST00000545686 PLEKHA5Q9HAU0 1116 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 UTP6Q9NYH9 597 aaKnown RBP8.92□□□□□ -0.98
TDP1-204ENST00000545686 ERAP1Q9NZ08 941 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 EPS15L1Q9UBC2 864 aa8.92□□□□□ -0.98
TDP1-204ENST00000545686 GNEQ9Y223 722 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms