RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 PSMB7Q99436 277 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 C2orf49Q9BVC5 232 aaPredicted RBP13.46□□□□□ -0.25
LTBR-208ENST00000541005 RSPH9Q9H1X1 276 aaPredicted RBP13.46□□□□□ -0.25
LTBR-208ENST00000541005 CD93Q9NPY3 652 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 SEMA4GQ9NTN9 838 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 VPS28Q9UK41 221 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 CYP8B1Q9UNU6 501 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 HS3ST2Q9Y278 367 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 ANKRD36A6QL64 1941 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 CABIN1Q9Y6J0 2220 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 SHROOM3Q8TF72 1996 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 PLXNA2O75051 1894 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 CXorf51AA0A1B0GTR3 108 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 TTC34A8MYJ7 566 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 EIF3CLB5ME19 914 aaKnown RBP13.45□□□□□ -0.26
LTBR-208ENST00000541005 FAM72CH0Y354 149 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 AP5Z1O43299 807 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 ATP9BO43861 1147 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 SRGAP2O75044 1071 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 SIN3BO75182 1162 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 LRIG2O94898 1065 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 ZNF806P0C7X5 589 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 RHOQP17081 205 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 PSMA2P25787 234 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 CD6P30203 668 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 OXTRP30559 389 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 OR1E1P30953 314 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 HOXD12P35452 270 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 DPP6P42658 865 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 MAPKAPK2P49137 400 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 STK19P49842 368 aaPredicted RBP13.45□□□□□ -0.26
LTBR-208ENST00000541005 RPS14P62263 151 aaKnown RBP13.45□□□□□ -0.26
LTBR-208ENST00000541005 RPL6Q02878 288 aaKnown RBP13.45□□□□□ -0.26
LTBR-208ENST00000541005 MAPK8IP2Q13387 824 aaPredicted RBP13.45□□□□□ -0.26
LTBR-208ENST00000541005 EFHC2Q5JST6 749 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 C9orf64Q5T6V5 341 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 FAM72AQ5TYM5 149 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 PEAR1Q5VY43 1037 aaPredicted RBP13.45□□□□□ -0.26
LTBR-208ENST00000541005 ZNF776Q68DI1 518 aaPredicted RBP13.45□□□□□ -0.26
LTBR-208ENST00000541005 FAM72DQ6L9T8 149 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 TFAP2DQ7Z6R9 452 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 NLRP14Q86W24 1093 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 FAM72BQ86X60 149 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 KIAA2013Q8IYS2 634 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 OR8K1Q8NGG5 319 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 TBC1D31Q96DN5 1066 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 EIF3CQ99613 913 aaKnown RBP13.45□□□□□ -0.26
LTBR-208ENST00000541005 NCAPGQ9BPX3 1015 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.45□□□□□ -0.26
LTBR-208ENST00000541005 MUC3BQ9H195 1237 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 ARRDC1-AS1Q9H2J1 176 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 MRPL47Q9HD33 250 aaKnown RBP13.45□□□□□ -0.26
LTBR-208ENST00000541005 VPS45Q9NRW7 570 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 TMEM248Q9NWD8 314 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 SLCO3A1Q9UIG8 710 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 SLC25A13Q9UJS0 675 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 FZD10Q9ULW2 581 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 SCML1Q9UN30 329 aa13.45□□□□□ -0.26
LTBR-208ENST00000541005 A0A0D9SEW6 157 aa13.44□□□□□ -0.26
LTBR-208ENST00000541005 SSU72P8A0A1W2PR75 194 aa13.44□□□□□ -0.26
LTBR-208ENST00000541005 MAP3K13O43283 966 aa13.44□□□□□ -0.26
LTBR-208ENST00000541005 MFAP3LO75121 409 aa13.44□□□□□ -0.26
LTBR-208ENST00000541005 TPM1P09493 284 aa13.44□□□□□ -0.26
LTBR-208ENST00000541005 HTR7P34969 479 aa13.44□□□□□ -0.26
LTBR-208ENST00000541005 ETFBP38117 255 aa13.44□□□□□ -0.26
LTBR-208ENST00000541005 NNMTP40261 264 aa13.44□□□□□ -0.26
LTBR-208ENST00000541005 CLCN6P51797 869 aa13.44□□□□□ -0.26
LTBR-208ENST00000541005 KRT83P78385 493 aa13.44□□□□□ -0.26
LTBR-208ENST00000541005 ELAVL3Q14576 367 aaKnown RBP13.44□□□□□ -0.26
LTBR-208ENST00000541005 ACAP1Q15027 740 aa13.44□□□□□ -0.26
LTBR-208ENST00000541005 ASTE1Q2TB18 679 aaPredicted RBP13.44□□□□□ -0.26
LTBR-208ENST00000541005 TTC31Q49AM3 519 aaPredicted RBP13.44□□□□□ -0.26
LTBR-208ENST00000541005 ALKBH5Q6P6C2 394 aaKnown RBP13.44□□□□□ -0.26
LTBR-208ENST00000541005 PRR23CQ6ZRP0 262 aa13.44□□□□□ -0.26
LTBR-208ENST00000541005 CYP2U1Q7Z449 544 aa13.44□□□□□ -0.26
LTBR-208ENST00000541005 SH2D3CQ8N5H7 860 aa13.44□□□□□ -0.26
LTBR-208ENST00000541005 ARFGAP1Q8N6T3 406 aa13.44□□□□□ -0.26
LTBR-208ENST00000541005 PTPRN2Q92932 1015 aa13.44□□□□□ -0.26
LTBR-208ENST00000541005 ZNF419Q96HQ0 510 aaPredicted RBP13.44□□□□□ -0.26
LTBR-208ENST00000541005 RPL10LQ96L21 214 aaKnown RBP13.44□□□□□ -0.26
LTBR-208ENST00000541005 TRIM7Q9C029 511 aa13.44□□□□□ -0.26
LTBR-208ENST00000541005 PCED1AQ9H1Q7 454 aa13.44□□□□□ -0.26
LTBR-208ENST00000541005 MTG2Q9H4K7 406 aa13.44□□□□□ -0.26
LTBR-208ENST00000541005 ABHD10Q9NUJ1 306 aa13.44□□□□□ -0.26
LTBR-208ENST00000541005 WSB2Q9NYS7 404 aaPredicted RBP13.44□□□□□ -0.26
LTBR-208ENST00000541005 VPS51Q9UID3 782 aa13.44□□□□□ -0.26
LTBR-208ENST00000541005 USP18Q9UMW8 372 aa13.44□□□□□ -0.26
LTBR-208ENST00000541005 SPTBN2O15020 2390 aa13.44□□□□□ -0.26
LTBR-208ENST00000541005 TRPM6Q9BX84 2022 aa13.44□□□□□ -0.26
LTBR-208ENST00000541005 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.43□□□□□ -0.26
LTBR-208ENST00000541005 PRR5-ARHGAP8B1AHC4 643 aa13.43□□□□□ -0.26
LTBR-208ENST00000541005 ALOX15BO15296 676 aa13.43□□□□□ -0.26
LTBR-208ENST00000541005 ZMPSTE24O75844 475 aa13.43□□□□□ -0.26
LTBR-208ENST00000541005 CYP1A2P05177 515 aa13.43□□□□□ -0.26
LTBR-208ENST00000541005 ACADMP11310 421 aa13.43□□□□□ -0.26
LTBR-208ENST00000541005 PCK1P35558 622 aa13.43□□□□□ -0.26
LTBR-208ENST00000541005 EIF4A3P38919 411 aaKnown RBP13.43□□□□□ -0.26
LTBR-208ENST00000541005 PTGER3P43115 390 aa13.43□□□□□ -0.26
LTBR-208ENST00000541005 DHPSP49366 369 aaPredicted RBP13.43□□□□□ -0.26
LTBR-208ENST00000541005 ARHGAP8P85298 464 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms