RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 ADSSP30520 456 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 HOXA6P31267 233 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 RCVRNP35243 200 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 RGS7P49802 495 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 TTLL4Q14679 1199 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 SNRNP35Q16560 246 aaKnown RBP12.88□□□□□ -0.35
DDX55-206ENST00000539934 FAM209BQ5JX69 171 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 DEFB128Q7Z7B8 93 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 LRRC34Q8IZ02 419 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 ELMOD2Q8IZ81 293 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 LINC00518Q8N0U6 118 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 TEX47Q8TBZ9 253 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 ART5Q96L15 291 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 SPATA33Q96N06 139 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 GPR20Q99678 358 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 INTS9Q9NV88 658 aaKnown RBP12.88□□□□□ -0.35
DDX55-206ENST00000539934 ARHGAP28Q9P2N2 729 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 STARD13Q9Y3M8 1113 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 GPSM3Q9Y4H4 160 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 MYH10P35580 1976 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 DMDP11532 3685 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 A0A1B0GWJ7 208 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 LRRIQ4A6NIV6 560 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 SCO2O43819 266 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 CLN5O75503 358 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 RECKO95980 971 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 CA3P07451 260 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 KRT16P08779 473 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 ICAM2P13598 275 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 ITGAXP20702 1163 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 MARK3P27448 753 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 CLCN4P51793 760 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 PRAMEP78395 509 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 RHAGQ02094 409 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 STRN3Q13033 797 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 PDE12Q6L8Q7 609 aaKnown RBP12.87□□□□□ -0.35
DDX55-206ENST00000539934 ARMCX2Q7L311 632 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 TSPYL5Q86VY4 417 aaPredicted RBP12.87□□□□□ -0.35
DDX55-206ENST00000539934 CBWD2Q8IUF1 395 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 RHOBTB2Q9BYZ6 727 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 WNT8AQ9H1J5 351 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 CRLF2Q9HC73 371 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 FAM114A2Q9NRY5 505 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 NMRK1Q9NWW6 199 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 STMN3Q9NZ72 180 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 STOML1Q9UBI4 398 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 AJAP1Q9UKB5 411 aaPredicted RBP12.87□□□□□ -0.35
DDX55-206ENST00000539934 CLEC4AQ9UMR7 237 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 DUSP10Q9Y6W6 482 aa12.87□□□□□ -0.35
DDX55-206ENST00000539934 PCP4L1A6NKN8 68 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 GOLGA8SH3BPF8 625 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 PI15O43692 258 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 CAPNS1P04632 268 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 ATP5BP06576 529 aaKnown RBP12.86□□□□□ -0.35
DDX55-206ENST00000539934 ADRB2P07550 413 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 GLRA2P23416 452 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 STAT1P42224 750 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 NAMPTP43490 491 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 GCLMP48507 274 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 LIG4P49917 911 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 JAM2P57087 298 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 TAP1Q03518 808 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 PPP3CAQ08209 521 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 GRSF1Q12849 480 aaKnown RBP eCLIP12.86□□□□□ -0.35
DDX55-206ENST00000539934 PTK2BQ14289 1009 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 SLC18A3Q16572 532 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 SMU1Q2TAY7 513 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 GRAMD1BQ3KR37 738 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 AADACL4Q5VUY2 407 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 SLC39A4Q6P5W5 647 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 EMBQ6PCB8 327 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 LIMS2Q7Z4I7 341 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 IRF2BP2Q7Z5L9 587 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 NET1Q7Z628 596 aaPredicted RBP12.86□□□□□ -0.35
DDX55-206ENST00000539934 ALYREFQ86V81 257 aaKnown RBP12.86□□□□□ -0.35
DDX55-206ENST00000539934 COLGALT2Q8IYK4 626 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 PCSK9Q8NBP7 692 aaKnown RBP12.86□□□□□ -0.35
DDX55-206ENST00000539934 ATAD1Q8NBU5 361 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 SCFD2Q8WU76 684 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 RASSF5Q8WWW0 418 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 COPS5Q92905 334 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 THAP11Q96EK4 314 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 SGF29Q96ES7 293 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 DNAJC1Q96KC8 554 aaKnown RBP12.86□□□□□ -0.35
DDX55-206ENST00000539934 LMAN2LQ9H0V9 348 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 MOV10Q9HCE1 1003 aaKnown RBP12.86□□□□□ -0.35
DDX55-206ENST00000539934 APEX2Q9UBZ4 518 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 NKX1-2Q9UD57 310 aaPredicted RBP12.86□□□□□ -0.35
DDX55-206ENST00000539934 ADAMTS1Q9UHI8 967 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 DNAJC12Q9UKB3 198 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 DUSP12Q9UNI6 340 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 HCN4Q9Y3Q4 1203 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 SIP14410 1827 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 MICAL2O94851 1124 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 AGR2O95994 175 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 CD4P01730 458 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 RARAP10276 462 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 PRKCAP17252 672 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 ARL2P36404 184 aa12.86□□□□□ -0.35
DDX55-206ENST00000539934 ATP6V0D1P61421 351 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms