RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 ZNF840PA6NDX5 716 aa17.54■□□□□ 0.4
LTBR-207ENST00000539925 ERICH4A6NGS2 130 aa17.54■□□□□ 0.4
LTBR-207ENST00000539925 KRT38O76015 456 aa17.54■□□□□ 0.4
LTBR-207ENST00000539925 ALDH1A2O94788 518 aa17.54■□□□□ 0.4
LTBR-207ENST00000539925 POLBP06746 335 aa17.54■□□□□ 0.4
LTBR-207ENST00000539925 ZBTB17Q13105 803 aa17.54■□□□□ 0.4
LTBR-207ENST00000539925 DNAJC3Q13217 504 aa17.54■□□□□ 0.4
LTBR-207ENST00000539925 KBTBD12Q3ZCT8 623 aa17.54■□□□□ 0.4
LTBR-207ENST00000539925 C5orf22Q49AR2 442 aa17.54■□□□□ 0.4
LTBR-207ENST00000539925 SPANXN3Q5MJ09 141 aa17.54■□□□□ 0.4
LTBR-207ENST00000539925 SYCP2LQ5T4T6 812 aa17.54■□□□□ 0.4
LTBR-207ENST00000539925 ARTNQ5T4W7 220 aa17.54■□□□□ 0.4
LTBR-207ENST00000539925 TTC39BQ5VTQ0 682 aaPredicted RBP17.54■□□□□ 0.4
LTBR-207ENST00000539925 CASC4Q6P4E1 433 aa17.54■□□□□ 0.4
LTBR-207ENST00000539925 CCDC117Q8IWD4 279 aaPredicted RBP17.54■□□□□ 0.4
LTBR-207ENST00000539925 TP53INP2Q8IXH6 220 aa17.54■□□□□ 0.4
LTBR-207ENST00000539925 ZSCAN18Q8TBC5 510 aaPredicted RBP17.54■□□□□ 0.4
LTBR-207ENST00000539925 MDM1Q8TC05 714 aa17.54■□□□□ 0.4
LTBR-207ENST00000539925 AGAP3Q96P47 875 aa17.54■□□□□ 0.4
LTBR-207ENST00000539925 CCT8L2Q96SF2 557 aa17.54■□□□□ 0.4
LTBR-207ENST00000539925 PRMT1Q99873 361 aaKnown RBP17.54■□□□□ 0.4
LTBR-207ENST00000539925 RXFP1Q9HBX9 757 aa17.54■□□□□ 0.4
LTBR-207ENST00000539925 CASS4Q9NQ75 786 aa17.54■□□□□ 0.4
LTBR-207ENST00000539925 PRKAG2Q9UGJ0 569 aa17.54■□□□□ 0.4
LTBR-207ENST00000539925 IPO11Q9UI26 975 aaKnown RBP17.54■□□□□ 0.4
LTBR-207ENST00000539925 GGA2Q9UJY4 613 aa17.54■□□□□ 0.4
LTBR-207ENST00000539925 VANGL2Q9ULK5 521 aa17.54■□□□□ 0.4
LTBR-207ENST00000539925 FAM159BA6NKW6 160 aa17.53■□□□□ 0.4
LTBR-207ENST00000539925 F5H5T6 163 aa17.53■□□□□ 0.4
LTBR-207ENST00000539925 C2CD2LO14523 706 aa17.53■□□□□ 0.4
LTBR-207ENST00000539925 ZWINTO95229 277 aa17.53■□□□□ 0.4
LTBR-207ENST00000539925 MT-ND3P03897 115 aa17.53■□□□□ 0.4
LTBR-207ENST00000539925 RPL17P18621 184 aaKnown RBP17.53■□□□□ 0.4
LTBR-207ENST00000539925 CD68P34810 354 aaPredicted RBP17.53■□□□□ 0.4
LTBR-207ENST00000539925 IL9RQ01113 521 aa17.53■□□□□ 0.4
LTBR-207ENST00000539925 PABPC1LQ4VXU2 614 aaKnown RBP17.53■□□□□ 0.4
LTBR-207ENST00000539925 MICALCLQ6ZW33 695 aa17.53■□□□□ 0.4
LTBR-207ENST00000539925 C14orf80Q86SX3 495 aa17.53■□□□□ 0.4
LTBR-207ENST00000539925 CHSY1Q86X52 802 aa17.53■□□□□ 0.4
LTBR-207ENST00000539925 AGGF1Q8N302 714 aaeCLIP17.53■□□□□ 0.4
LTBR-207ENST00000539925 IL22Q9GZX6 179 aa17.53■□□□□ 0.4
LTBR-207ENST00000539925 MOCS1Q9NZB8 636 aa17.53■□□□□ 0.4
LTBR-207ENST00000539925 GREB1Q4ZG55 1949 aa17.52■□□□□ 0.4
LTBR-207ENST00000539925 ZNF638Q14966 1978 aaKnown RBP17.52■□□□□ 0.4
LTBR-207ENST00000539925 EBAG9O00559 213 aa17.52■□□□□ 0.4
LTBR-207ENST00000539925 PRRG1O14668 218 aa17.52■□□□□ 0.4
LTBR-207ENST00000539925 LATS1O95835 1130 aa17.52■□□□□ 0.4
LTBR-207ENST00000539925 TBX18O95935 607 aa17.52■□□□□ 0.4
LTBR-207ENST00000539925 SNRPAP09012 282 aaKnown RBP17.52■□□□□ 0.4
LTBR-207ENST00000539925 HMGA1P17096 107 aaKnown RBP17.52■□□□□ 0.4
LTBR-207ENST00000539925 NFKB1P19838 968 aa17.52■□□□□ 0.4
LTBR-207ENST00000539925 PAPOLAP51003 745 aaKnown RBP17.52■□□□□ 0.4
LTBR-207ENST00000539925 TNK2Q07912 1038 aa17.52■□□□□ 0.4
LTBR-207ENST00000539925 CDH17Q12864 832 aa17.52■□□□□ 0.4
LTBR-207ENST00000539925 RABGAP1LQ5R372 815 aa17.52■□□□□ 0.4
LTBR-207ENST00000539925 FBXL22Q6P050 247 aa17.52■□□□□ 0.4
LTBR-207ENST00000539925 CTAGE3PQ8IX95 158 aa17.52■□□□□ 0.4
LTBR-207ENST00000539925 FIBCD1Q8N539 461 aa17.52■□□□□ 0.4
LTBR-207ENST00000539925 RPRD1AQ96P16 312 aaPredicted RBP17.52■□□□□ 0.4
LTBR-207ENST00000539925 CCSER2Q9H7U1 834 aa17.52■□□□□ 0.4
LTBR-207ENST00000539925 GLOD4Q9HC38 313 aa17.52■□□□□ 0.4
LTBR-207ENST00000539925 TM9SF1O15321 606 aa17.52■□□□□ 0.39
LTBR-207ENST00000539925 ACSL4O60488 711 aa17.52■□□□□ 0.39
LTBR-207ENST00000539925 SEC24AO95486 1093 aa17.52■□□□□ 0.39
LTBR-207ENST00000539925 FGBP02675 491 aa17.52■□□□□ 0.39
LTBR-207ENST00000539925 TACR2P21452 398 aa17.52■□□□□ 0.39
LTBR-207ENST00000539925 ITGB8P26012 769 aa17.52■□□□□ 0.39
LTBR-207ENST00000539925 HTRA4P83105 476 aaPredicted RBP17.52■□□□□ 0.39
LTBR-207ENST00000539925 SPARCL1Q14515 664 aa17.52■□□□□ 0.39
LTBR-207ENST00000539925 RAP1GAP2Q684P5 730 aa17.52■□□□□ 0.39
LTBR-207ENST00000539925 FAM117BQ6P1L5 589 aa17.52■□□□□ 0.39
LTBR-207ENST00000539925 PPM1NQ8N819 430 aa17.52■□□□□ 0.39
LTBR-207ENST00000539925 DNAAF3Q8N9W5 541 aa17.52■□□□□ 0.39
LTBR-207ENST00000539925 PTCD2Q8WV60 388 aaKnown RBP17.52■□□□□ 0.39
LTBR-207ENST00000539925 CEP41Q9BYV8 373 aa17.52■□□□□ 0.39
LTBR-207ENST00000539925 FAM107BQ9H098 131 aa17.52■□□□□ 0.39
LTBR-207ENST00000539925 ENTPD7Q9NQZ7 604 aa17.52■□□□□ 0.39
LTBR-207ENST00000539925 MPP6Q9NZW5 540 aa17.52■□□□□ 0.39
LTBR-207ENST00000539925 NR2E3Q9Y5X4 410 aa17.52■□□□□ 0.39
LTBR-207ENST00000539925 RAMP2O60895 175 aa17.51■□□□□ 0.39
LTBR-207ENST00000539925 C1QAP02745 245 aa17.51■□□□□ 0.39
LTBR-207ENST00000539925 CTSAP10619 480 aa17.51■□□□□ 0.39
LTBR-207ENST00000539925 MGAT1P26572 445 aa17.51■□□□□ 0.39
LTBR-207ENST00000539925 GRIA1P42261 906 aa17.51■□□□□ 0.39
LTBR-207ENST00000539925 SESN2P58004 480 aaPredicted RBP17.51■□□□□ 0.39
LTBR-207ENST00000539925 MTM1Q13496 603 aa17.51■□□□□ 0.39
LTBR-207ENST00000539925 MARK2Q7KZI7 788 aaKnown RBP17.51■□□□□ 0.39
LTBR-207ENST00000539925 CPLX4Q7Z7G2 160 aa17.51■□□□□ 0.39
LTBR-207ENST00000539925 DNAJC5GQ8N7S2 189 aa17.51■□□□□ 0.39
LTBR-207ENST00000539925 NETO2Q8NC67 525 aa17.51■□□□□ 0.39
LTBR-207ENST00000539925 ZNF473Q8WTR7 871 aaKnown RBP17.51■□□□□ 0.39
LTBR-207ENST00000539925 DEPDC1BQ8WUY9 529 aa17.51■□□□□ 0.39
LTBR-207ENST00000539925 CKAP2Q8WWK9 683 aa17.51■□□□□ 0.39
LTBR-207ENST00000539925 ARNTL2Q8WYA1 636 aa17.51■□□□□ 0.39
LTBR-207ENST00000539925 PSMG2Q969U7 264 aa17.51■□□□□ 0.39
LTBR-207ENST00000539925 VPS45Q9NRW7 570 aa17.51■□□□□ 0.39
LTBR-207ENST00000539925 RBM22Q9NW64 420 aaKnown RBP eCLIP17.51■□□□□ 0.391e-9■□□□□ 9.3
LTBR-207ENST00000539925 INSL6Q9Y581 213 aa17.51■□□□□ 0.39
LTBR-207ENST00000539925 FAM237BA0A1B0GVD1 139 aa17.5■□□□□ 0.39
LTBR-207ENST00000539925 USP1O94782 785 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms