RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 BASP1P80723 227 aaKnown RBP12.06□□□□□ -0.48
VTN-202ENST00000539746 RAD51Q06609 339 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 TNK2Q07912 1038 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 HYAL1Q12794 435 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 SERINC3Q13530 473 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 TPSAB1Q15661 275 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 TEX44Q53QW1 395 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 HSP90B2PQ58FF3 399 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 FAM133BQ5BKY9 247 aaKnown RBP12.06□□□□□ -0.48
VTN-202ENST00000539746 IZUMO3Q5VZ72 239 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 RNF219Q5W0B1 726 aaPredicted RBP12.06□□□□□ -0.48
VTN-202ENST00000539746 PID1Q7Z2X4 250 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 ADGRD2Q7Z7M1 963 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 ARID3BQ8IVW6 561 aaPredicted RBP12.06□□□□□ -0.48
VTN-202ENST00000539746 ZCCHC9Q8N567 271 aaKnown RBP12.06□□□□□ -0.48
VTN-202ENST00000539746 DCAF4L2Q8NA75 395 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 MCUQ8NE86 351 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 OSCP1Q8WVF1 389 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 P2RY11Q96G91 374 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 MSANTD3Q96H12 275 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 ADAM33Q9BZ11 813 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 POLR1EQ9GZS1 481 aaKnown RBP12.06□□□□□ -0.48
VTN-202ENST00000539746 LRRC40Q9H9A6 602 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 ATP13A1Q9HD20 1204 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 SMARCAL1Q9NZC9 954 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 MARK1Q9P0L2 795 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 IGSF9Q9P2J2 1179 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 RSPH14Q9UHP6 348 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 R3HDM2Q9Y2K5 976 aaKnown RBP12.06□□□□□ -0.48
VTN-202ENST00000539746 ARIH1Q9Y4X5 557 aaPredicted RBP12.06□□□□□ -0.48
VTN-202ENST00000539746 MAGEB16A2A368 324 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 FAM72CH0Y354 149 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 NPC1O15118 1278 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 KDELR3O43731 214 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 TBL1XO60907 577 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 ECI2O75521 394 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 ARHGEF15O94989 841 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 ATP5BP06576 529 aaKnown RBP12.05□□□□□ -0.48
VTN-202ENST00000539746 GSTA2P09210 222 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 PECAM1P16284 738 aaPredicted RBP12.05□□□□□ -0.48
VTN-202ENST00000539746 RBL1P28749 1068 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 MAGEA6P43360 314 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 PLTPP55058 493 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 EIF4HQ15056 248 aaKnown RBP12.05□□□□□ -0.48
VTN-202ENST00000539746 ZNF77Q15935 545 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 HIF1AQ16665 826 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 FAM72AQ5TYM5 149 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 ALS2CLQ60I27 953 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 FAM72DQ6L9T8 149 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 TTC27Q6P3X3 843 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 FAM72BQ86X60 149 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 RELL1Q8IUW5 271 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 ZNF683Q8IZ20 524 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 NDUFAF2Q8N183 169 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 MREGQ8N565 214 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 FIBINQ8TAL6 211 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 UCMAQ8WVF2 138 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 ART4Q93070 314 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 ELSPBP1Q96BH3 223 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 ZFRQ96KR1 1074 aaKnown RBP12.05□□□□□ -0.48
VTN-202ENST00000539746 GBA3Q9H227 469 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 SPHK2Q9NRA0 654 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 RAB6BQ9NRW1 208 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 GKN1Q9NS71 199 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 DUS2Q9NX74 493 aaKnown RBP12.05□□□□□ -0.48
VTN-202ENST00000539746 CLDND1Q9NY35 253 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 SEPT10Q9P0V9 454 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 UBA2Q9UBT2 640 aaPredicted RBP12.05□□□□□ -0.48
VTN-202ENST00000539746 CD207Q9UJ71 328 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 SLC25A13Q9UJS0 675 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 VPS28Q9UK41 221 aa12.05□□□□□ -0.48
VTN-202ENST00000539746 FARP1Q9Y4F1 1045 aaPredicted RBP12.05□□□□□ -0.48
VTN-202ENST00000539746 MTCL1Q9Y4B5 1905 aaKnown RBP12.05□□□□□ -0.48
VTN-202ENST00000539746 GREB1Q4ZG55 1949 aa12.04□□□□□ -0.48
VTN-202ENST00000539746 PRAMEF11O60813 436 aa12.04□□□□□ -0.48
VTN-202ENST00000539746 H2AFXP16104 143 aaPredicted RBP12.04□□□□□ -0.48
VTN-202ENST00000539746 IGFBP4P22692 258 aa12.04□□□□□ -0.48
VTN-202ENST00000539746 ATP5DP30049 168 aa12.04□□□□□ -0.48
VTN-202ENST00000539746 EIF2DP41214 584 aaKnown RBP12.04□□□□□ -0.48
VTN-202ENST00000539746 MMP13P45452 471 aa12.04□□□□□ -0.48
VTN-202ENST00000539746 KCNJ1P48048 391 aa12.04□□□□□ -0.48
VTN-202ENST00000539746 PGFP49763 221 aa12.04□□□□□ -0.48
VTN-202ENST00000539746 PAPOLAP51003 745 aaKnown RBP12.04□□□□□ -0.48
VTN-202ENST00000539746 PLK1P53350 603 aa12.04□□□□□ -0.48
VTN-202ENST00000539746 SLC7A5Q01650 507 aa12.04□□□□□ -0.48
VTN-202ENST00000539746 MPP3Q13368 585 aa12.04□□□□□ -0.48
VTN-202ENST00000539746 SEMA5AQ13591 1074 aa12.04□□□□□ -0.48
VTN-202ENST00000539746 COL19A1Q14993 1142 aa12.04□□□□□ -0.48
VTN-202ENST00000539746 LLGL1Q15334 1064 aa12.04□□□□□ -0.48
VTN-202ENST00000539746 CTC1Q2NKJ3 1217 aa12.04□□□□□ -0.48
VTN-202ENST00000539746 ANKRD20A2Q5SQ80 823 aa12.04□□□□□ -0.48
VTN-202ENST00000539746 ANKRD20A1Q5TYW2 823 aa12.04□□□□□ -0.48
VTN-202ENST00000539746 ANKRD20A3Q5VUR7 823 aa12.04□□□□□ -0.48
VTN-202ENST00000539746 GET4Q7L5D6 327 aaPredicted RBP12.04□□□□□ -0.48
VTN-202ENST00000539746 TFAP2DQ7Z6R9 452 aa12.04□□□□□ -0.48
VTN-202ENST00000539746 NPAS3Q8IXF0 933 aa12.04□□□□□ -0.48
VTN-202ENST00000539746 AHI1Q8N157 1196 aa12.04□□□□□ -0.48
VTN-202ENST00000539746 CARNMT1Q8N4J0 409 aa12.04□□□□□ -0.48
VTN-202ENST00000539746 ANKRD7Q92527 254 aa12.04□□□□□ -0.48
VTN-202ENST00000539746 MAML1Q92585 1016 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms