RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 IGSF9Q9P2J2 1179 aa14.44□□□□□ -0.1
ACTN1-205ENST00000538545 MTRRQ9UBK8 725 aa14.44□□□□□ -0.1
ACTN1-205ENST00000538545 RPS6KL1Q9Y6S9 549 aa14.44□□□□□ -0.1
ACTN1-205ENST00000538545 C2orf78A6NCI8 922 aa14.43□□□□□ -0.1
ACTN1-205ENST00000538545 PMPCBO75439 489 aa14.43□□□□□ -0.1
ACTN1-205ENST00000538545 HLA-DQB2P05538 268 aa14.43□□□□□ -0.1
ACTN1-205ENST00000538545 MX2P20592 715 aa14.43□□□□□ -0.1
ACTN1-205ENST00000538545 PLD1Q13393 1074 aa14.43□□□□□ -0.1
ACTN1-205ENST00000538545 RIBC1Q8N443 379 aaPredicted RBP14.43□□□□□ -0.1
ACTN1-205ENST00000538545 OR52K2Q8NGK3 314 aa14.43□□□□□ -0.1
ACTN1-205ENST00000538545 GSDMBQ8TAX9 411 aa14.43□□□□□ -0.1
ACTN1-205ENST00000538545 BHMTQ93088 406 aa14.43□□□□□ -0.1
ACTN1-205ENST00000538545 CENPTQ96BT3 561 aa14.43□□□□□ -0.1
ACTN1-205ENST00000538545 PABPC5Q96DU9 382 aaKnown RBP14.43□□□□□ -0.1
ACTN1-205ENST00000538545 RPRD1AQ96P16 312 aaPredicted RBP14.43□□□□□ -0.1
ACTN1-205ENST00000538545 PHACTR1Q9C0D0 580 aa14.43□□□□□ -0.1
ACTN1-205ENST00000538545 BRD8Q9H0E9 1235 aa14.43□□□□□ -0.1
ACTN1-205ENST00000538545 GBA3Q9H227 469 aa14.43□□□□□ -0.1
ACTN1-205ENST00000538545 PCDHA11Q9Y5I1 949 aa14.43□□□□□ -0.1
ACTN1-205ENST00000538545 FAM92AA1XBS5 289 aa14.43□□□□□ -0.1
ACTN1-205ENST00000538545 SDR42E2A6NKP2 422 aa14.43□□□□□ -0.1
ACTN1-205ENST00000538545 CAPN15O75808 1086 aa14.43□□□□□ -0.1
ACTN1-205ENST00000538545 ACVRL1P37023 503 aa14.43□□□□□ -0.1
ACTN1-205ENST00000538545 ELAVL2Q12926 359 aaKnown RBP14.43□□□□□ -0.1
ACTN1-205ENST00000538545 BEND5Q7L4P6 421 aa14.43□□□□□ -0.1
ACTN1-205ENST00000538545 RTL3Q8N8U3 475 aaKnown RBP14.43□□□□□ -0.1
ACTN1-205ENST00000538545 DENND1AQ8TEH3 1009 aa14.43□□□□□ -0.1
ACTN1-205ENST00000538545 TMEM169Q96HH4 297 aa14.43□□□□□ -0.1
ACTN1-205ENST00000538545 NACA2Q9H009 215 aa14.43□□□□□ -0.1
ACTN1-205ENST00000538545 RNF38Q9H0F5 515 aa14.43□□□□□ -0.1
ACTN1-205ENST00000538545 XAB2Q9HCS7 855 aaKnown RBP14.43□□□□□ -0.1
ACTN1-205ENST00000538545 RBM22Q9NW64 420 aaKnown RBP eCLIP14.43□□□□□ -0.12e-6■■□□□ 12.7
ACTN1-205ENST00000538545 FAM169AQ9Y6X4 670 aa14.43□□□□□ -0.1
ACTN1-205ENST00000538545 MYLKQ15746 1914 aa14.43□□□□□ -0.1
ACTN1-205ENST00000538545 A6NNZ2 444 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 ZBBXA8MT70 800 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 H7C4K7 107 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 ASMTLO95671 621 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 MT-ND3P03897 115 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 RAG1P15918 1043 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 SLC6A4P31645 630 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 WDR5P61964 334 aaKnown RBP14.42□□□□□ -0.1
ACTN1-205ENST00000538545 IRX4P78413 519 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 IHHQ14623 411 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 CRYMQ14894 314 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 TUBB8Q3ZCM7 444 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 SLC8B1Q6J4K2 584 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 MSANTD2Q6P1R3 559 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 SPRED2Q7Z698 418 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 CHSY1Q86X52 802 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 ZNF683Q8IZ20 524 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 CKAP2Q8WWK9 683 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 PSMG2Q969U7 264 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 ZNF669Q96BR6 464 aaPredicted RBP14.42□□□□□ -0.1
ACTN1-205ENST00000538545 AGAP2Q99490 1192 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 FERMT1Q9BQL6 677 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 CATSPERBQ9H7T0 1116 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 IPO11Q9UI26 975 aaKnown RBP14.42□□□□□ -0.1
ACTN1-205ENST00000538545 AP2A1O95782 977 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 SGSHP51688 502 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 SLC10A7Q0GE19 358 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 KCTD11Q693B1 232 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 CGB2Q6NT52 195 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 SLC26A11Q86WA9 606 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 FAM111AQ96PZ2 611 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 SLC22A12Q96S37 553 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 TRIM62Q9BVG3 475 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 A0A0D9SEW6 157 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 EFEMP2O95967 443 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 TAC1P20366 129 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 PRKCHP24723 683 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 HOXC13P31276 330 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 RPS24P62847 133 aaKnown RBP14.42□□□□□ -0.1
ACTN1-205ENST00000538545 ITKQ08881 620 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 POU6F1Q14863 301 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 DENND1CQ8IV53 801 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 MECRQ9BV79 373 aa14.42□□□□□ -0.1
ACTN1-205ENST00000538545 RRP15Q9Y3B9 282 aaKnown RBP14.42□□□□□ -0.1
ACTN1-205ENST00000538545 NRG2O14511 850 aaPredicted RBP14.41□□□□□ -0.1
ACTN1-205ENST00000538545 NCAM2O15394 837 aa14.41□□□□□ -0.1
ACTN1-205ENST00000538545 COCHO43405 550 aa14.41□□□□□ -0.1
ACTN1-205ENST00000538545 RTN3O95197 1032 aaPredicted RBP14.41□□□□□ -0.1
ACTN1-205ENST00000538545 HMGA1P17096 107 aaKnown RBP14.41□□□□□ -0.1
ACTN1-205ENST00000538545 SARNPP82979 210 aaKnown RBP14.41□□□□□ -0.1
ACTN1-205ENST00000538545 RNF168Q8IYW5 571 aaPredicted RBP14.41□□□□□ -0.1
ACTN1-205ENST00000538545 BANPQ8N9N5 519 aa14.41□□□□□ -0.1
ACTN1-205ENST00000538545 PTPRN2Q92932 1015 aa14.41□□□□□ -0.1
ACTN1-205ENST00000538545 C11orf49Q9H6J7 331 aa14.41□□□□□ -0.1
ACTN1-205ENST00000538545 NT5MQ9NPB1 228 aa14.41□□□□□ -0.1
ACTN1-205ENST00000538545 PCMTD2Q9NV79 361 aa14.41□□□□□ -0.1
ACTN1-205ENST00000538545 TSPAN3O60637 253 aa14.41□□□□□ -0.1
ACTN1-205ENST00000538545 KLKB1P03952 638 aa14.41□□□□□ -0.1
ACTN1-205ENST00000538545 NMBRP28336 390 aa14.41□□□□□ -0.1
ACTN1-205ENST00000538545 LBX1P52954 281 aa14.41□□□□□ -0.1
ACTN1-205ENST00000538545 TRIP4Q15650 581 aaPredicted RBP14.41□□□□□ -0.1
ACTN1-205ENST00000538545 RNF187Q5TA31 235 aaPredicted RBP14.41□□□□□ -0.1
ACTN1-205ENST00000538545 C4orf22Q6V702 233 aa14.41□□□□□ -0.1
ACTN1-205ENST00000538545 ZNF689Q96CS4 500 aaPredicted RBP14.41□□□□□ -0.1
ACTN1-205ENST00000538545 YME1L1Q96TA2 773 aa14.41□□□□□ -0.1
ACTN1-205ENST00000538545 MOCS1Q9NZB8 636 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms