RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 DYDC1Q8WWB3 177 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 EIF3CQ99613 913 aaKnown RBP7.41□□□□□ -1.22
MSH6-209ENST00000538136 HERC2P3Q9BVR0 1158 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 ZYG11BQ9C0D3 744 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 KCNK9Q9NPC2 374 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 CHST7Q9NS84 486 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.41□□□□□ -1.22
MSH6-209ENST00000538136 FBXL12Q9NXK8 326 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 CA5BQ9Y2D0 317 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 SIT1Q9Y3P8 196 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 DLEC1Q9Y238 1755 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 J3KR12 359 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 M0QZQ0 153 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 PGRMC1O00264 195 aaKnown RBP7.41□□□□□ -1.22
MSH6-209ENST00000538136 SH3BGRLO75368 114 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 LRCH4O75427 683 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 MT-CYBP00156 380 aaPredicted RBP7.41□□□□□ -1.22
MSH6-209ENST00000538136 PABPC1P11940 636 aaKnown RBP7.41□□□□□ -1.22
MSH6-209ENST00000538136 CTSOP43234 321 aaPredicted RBP7.41□□□□□ -1.22
MSH6-209ENST00000538136 GALK1P51570 392 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 OGDHQ02218 1023 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 UBE3AQ05086 875 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 GAD2Q05329 585 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 FOXD4Q12950 439 aaPredicted RBP7.41□□□□□ -1.22
MSH6-209ENST00000538136 PLA2G4EQ3MJ16 856 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 ARSIQ5FYB1 569 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 APCDD1Q8J025 514 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 WDTC1Q8N5D0 677 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 PDCD7Q8N8D1 485 aaKnown RBP7.41□□□□□ -1.22
MSH6-209ENST00000538136 TPCN2Q8NHX9 752 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 CCDC26Q8TAB7 109 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 MGARPQ8TDB4 240 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 N4BP2L2Q92802 583 aaPredicted RBP7.41□□□□□ -1.22
MSH6-209ENST00000538136 EXOC4Q96A65 974 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 C9orf72Q96LT7 481 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 DCLK3Q9C098 648 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 DZANK1Q9NVP4 752 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 UTP6Q9NYH9 597 aaKnown RBP7.41□□□□□ -1.22
MSH6-209ENST00000538136 TBC1D14Q9P2M4 693 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 SALL4Q9UJQ4 1053 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 FBXW11Q9UKB1 542 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 NCKAP1Q9Y2A7 1128 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 ATP8A1Q9Y2Q0 1164 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 BACE2Q9Y5Z0 518 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 SIPA1L1O43166 1804 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 FFAR2O15552 330 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 PROSCO94903 275 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 HEXIM1O94992 359 aaKnown RBP7.4□□□□□ -1.22
MSH6-209ENST00000538136 CPP00450 1065 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 CD70P32970 193 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 HTRA4P83105 476 aaPredicted RBP7.4□□□□□ -1.22
MSH6-209ENST00000538136 ERCC6LQ2NKX8 1250 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 SARM1Q6SZW1 724 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 ALKAL1Q6UXT8 129 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 ARHGAP36Q6ZRI8 547 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 ZNF677Q86XU0 584 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 HJURPQ8NCD3 748 aaPredicted RBP7.4□□□□□ -1.22
MSH6-209ENST00000538136 JPH3Q8WXH2 748 aaPredicted RBP7.4□□□□□ -1.22
MSH6-209ENST00000538136 ATP2A3Q93084 1043 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 IGSF8Q969P0 613 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 HMCESQ96FZ2 354 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 BTN2A3PQ96KV6 586 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 SMIM14Q96QK8 99 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 STRA6Q9BX79 667 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 FAM96AQ9H5X1 160 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 ECT2Q9H8V3 914 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 SIRPGQ9P1W8 387 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 CLEC4EQ9ULY5 219 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 COG5Q9UP83 839 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 COQ6Q9Y2Z9 468 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 UNC13CQ8NB66 2214 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 SIGLEC16A6NMB1 481 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 RASA4BC9J798 803 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 STX7O15400 261 aaKnown RBP7.4□□□□□ -1.22
MSH6-209ENST00000538136 RASA4O43374 803 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 GLP2RO95838 553 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 TMEM253P0C7T8 217 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 SLC8A1P32418 973 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 RPL6Q02878 288 aaKnown RBP7.4□□□□□ -1.22
MSH6-209ENST00000538136 C1QBPQ07021 282 aaKnown RBP7.4□□□□□ -1.22
MSH6-209ENST00000538136 BCL2L1Q07817 233 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 PTPRRQ15256 657 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 SLC25A52Q3SY17 297 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 CRTC3Q6UUV7 619 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 ZNF852Q6ZMS4 543 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 KDM7AQ6ZMT4 941 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 PTAR1Q7Z6K3 402 aaPredicted RBP7.4□□□□□ -1.22
MSH6-209ENST00000538136 GPR149Q86SP6 731 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 CDC26Q8NHZ8 85 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 LMO3Q8TAP4 145 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 MAGEB10Q96LZ2 347 aaPredicted RBP7.4□□□□□ -1.22
MSH6-209ENST00000538136 PWWP2AQ96N64 755 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 KLHL32Q96NJ5 620 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 GUCD1Q96NT3 240 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 FICDQ9BVA6 458 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 TBC1D17Q9HA65 648 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 FBRSL1Q9HCM7 1045 aaKnown RBP7.4□□□□□ -1.22
MSH6-209ENST00000538136 SPHK2Q9NRA0 654 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 LATS2Q9NRM7 1088 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 HACD3Q9P035 362 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms