RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 HTR2BP41595 481 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 LIFRP42702 1097 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 CLCNKBP51801 687 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 GNG2P59768 71 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 FOXO4P98177 505 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 IKQ13123 557 aaPredicted RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 DGKZQ13574 1117 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 BMPR2Q13873 1038 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 ADGRE1Q14246 886 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 DLGAP5Q15398 846 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 CHI3L2Q15782 390 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 NFE2Q16621 373 aaPredicted RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 KLHL38Q2WGJ6 581 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 MGAT5BQ3V5L5 792 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 EPC2Q52LR7 807 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 HERC4Q5GLZ8 1057 aaPredicted RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 PAGE2BQ5JRK9 111 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 UGT3A1Q6NUS8 523 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 CNNM4Q6P4Q7 775 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 FIP1L1Q6UN15 594 aaKnown RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 CYP2R1Q6VVX0 501 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 TPH2Q8IWU9 490 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 CHERPQ8IWX8 916 aaKnown RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 EID3Q8N140 333 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 CCDC33Q8N5R6 958 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 MAGEB6Q8N7X4 407 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 ENAHQ8N8S7 591 aaPredicted RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 SLC30A5Q8TAD4 765 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 BCL7CQ8WUZ0 217 aaPredicted RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 GIMAP1Q8WWP7 306 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 RFFLQ8WZ73 363 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 ZNF668Q96K58 619 aaPredicted RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 C1orf74Q96LT6 269 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 GMLQ99445 158 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 ZSWIM1Q9BR11 485 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 UQCC2Q9BRT2 126 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 TMEM121Q9BTD3 319 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 ISCA1Q9BUE6 129 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 PCDHAC1Q9H158 963 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 RIMS3Q9UJD0 308 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 STRIP2Q9ULQ0 834 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 MYRFQ9Y2G1 1151 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 CAB39Q9Y376 341 aaPredicted RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 LOC285556D6RIA3 1793 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 MGAMO43451 1857 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 ZNF804BA4D1E1 1349 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 RNF223E7ERA6 249 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 PI4K2BG5E9Z4 385 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 ALOX15BO15296 676 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 DCXO43602 365 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 MARCH6O60337 910 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 TPST1O60507 370 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 HNRNPCL1O60812 293 aaKnown RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 EPN2O95208 641 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 DLGAP3O95886 979 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 FTLP02792 175 aaPredicted RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 GFAPP14136 432 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 ATF7P17544 494 aaPredicted RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 POLR2EP19388 210 aaKnown RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 ITIH2P19823 946 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 TGM1P22735 817 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 L1CAMP32004 1257 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 ADD2P35612 726 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 GJA5P36382 358 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 NAMPTP43490 491 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 HNRNPFP52597 415 aaKnown RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 HTRA3P83110 453 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 RHAGQ02094 409 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 CXCL9Q07325 125 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 GALNT2Q10471 571 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 DBPQ10586 325 aaPredicted RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 GRB10Q13322 594 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 TAF5Q15542 800 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 CYP27C1Q4G0S4 372 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 FAM47CQ5HY64 1035 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 CATSPEREQ5SY80 951 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 GPATCH4Q5T3I0 446 aaKnown RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 RAP1GAP2Q684P5 730 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 RINT1Q6NUQ1 792 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 C16orf46Q6P387 395 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 DCUN1D2Q6PH85 259 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 USP17L6PQ6QN14 398 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 CCBE1Q6UXH8 406 aaPredicted RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 CYFIP1Q7L576 1253 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 CROCCP2Q86T23 111 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 SLC51BQ86UW2 128 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 PIGZQ86VD9 579 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 HERC6Q8IVU3 1022 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 FAM9CQ8IZT9 166 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 ASCC1Q8N9N2 400 aaKnown RBP3.8□□□□□ -1.8
MCF2-210ENST00000536274 ABHD11Q8NFV4 315 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 PSMA8Q8TAA3 256 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 TRPC4APQ8TEL6 797 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 BIRC7Q96CA5 298 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 ZNF778Q96MU6 729 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 MROQ9BYG7 248 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 CLPBQ9H078 707 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 Q9H521 79 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 LTB4R2Q9NPC1 389 aa3.8□□□□□ -1.8
MCF2-210ENST00000536274 SIX2Q9NPC8 291 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms