RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 C1QTNF3-AMACRE9PGA6 284 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 ALOX15BO15296 676 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 PCDHGA12O60330 932 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 PAGE1O75459 146 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 TPM2P07951 284 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 EEF1GP26641 437 aaKnown RBP13.5□□□□□ -0.25
RTN3-207ENST00000536011 CLCN1P35523 988 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 CTSKP43235 329 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 ADPRHP54922 357 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 CDH4P55283 916 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 KRT83P78385 493 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 CENPCQ03188 943 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 KCNJ12Q14500 433 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 DPCR1Q3MIW9 517 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 ACCSLQ4AC99 568 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 CXorf57Q6NSI4 855 aaKnown RBP13.5□□□□□ -0.25
RTN3-207ENST00000536011 LRRC31Q6UY01 552 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 DBX2Q6ZNG2 339 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 OR14C36Q8NHC7 312 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 BAHD1Q8TBE0 780 aaPredicted RBP13.5□□□□□ -0.25
RTN3-207ENST00000536011 PTPRN2Q92932 1015 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 FAM129BQ96TA1 746 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 FEM1AQ9BSK4 669 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 C2orf49Q9BVC5 232 aaPredicted RBP13.5□□□□□ -0.25
RTN3-207ENST00000536011 MUC3BQ9H195 1237 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 WDCPQ9H6R7 721 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 AASDHPPTQ9NRN7 309 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 HS3ST4Q9Y661 456 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 NYNRINQ9P2P1 1898 aaKnown RBP13.5□□□□□ -0.25
RTN3-207ENST00000536011 FAM208BQ5VWN6 2430 aa13.5□□□□□ -0.25
RTN3-207ENST00000536011 ATP9BO43861 1147 aa13.49□□□□□ -0.25
RTN3-207ENST00000536011 CYP11B1P15538 503 aa13.49□□□□□ -0.25
RTN3-207ENST00000536011 ZNF18P17022 549 aa13.49□□□□□ -0.25
RTN3-207ENST00000536011 CD38P28907 300 aa13.49□□□□□ -0.25
RTN3-207ENST00000536011 CDH5P33151 784 aaPredicted RBP13.49□□□□□ -0.25
RTN3-207ENST00000536011 CXCR3P49682 368 aa13.49□□□□□ -0.25
RTN3-207ENST00000536011 SULT1E1P49888 294 aa13.49□□□□□ -0.25
RTN3-207ENST00000536011 CCDC15Q0P6D6 951 aa13.49□□□□□ -0.25
RTN3-207ENST00000536011 DRAP1Q14919 205 aaPredicted RBP13.49□□□□□ -0.25
RTN3-207ENST00000536011 MIIPQ5JXC2 388 aa13.49□□□□□ -0.25
RTN3-207ENST00000536011 FAM102AQ5T9C2 384 aaPredicted RBP13.49□□□□□ -0.25
RTN3-207ENST00000536011 ERICH1Q86X53 443 aa13.49□□□□□ -0.25
RTN3-207ENST00000536011 OXR1Q8N573 874 aa13.49□□□□□ -0.25
RTN3-207ENST00000536011 AADATQ8N5Z0 425 aa13.49□□□□□ -0.25
RTN3-207ENST00000536011 C18orf8Q96DM3 657 aa13.49□□□□□ -0.25
RTN3-207ENST00000536011 PGAP3Q96FM1 320 aaPredicted RBP13.49□□□□□ -0.25
RTN3-207ENST00000536011 SLC6A18Q96N87 628 aa13.49□□□□□ -0.25
RTN3-207ENST00000536011 NPY6RQ99463 290 aa13.49□□□□□ -0.25
RTN3-207ENST00000536011 ORAI3Q9BRQ5 295 aa13.49□□□□□ -0.25
RTN3-207ENST00000536011 TKTL2Q9H0I9 626 aa13.49□□□□□ -0.25
RTN3-207ENST00000536011 SIK2Q9H0K1 926 aa13.49□□□□□ -0.25
RTN3-207ENST00000536011 GDF3Q9NR23 364 aa13.49□□□□□ -0.25
RTN3-207ENST00000536011 PIGVQ9NUD9 493 aa13.49□□□□□ -0.25
RTN3-207ENST00000536011 AJAP1Q9UKB5 411 aaPredicted RBP13.49□□□□□ -0.25
RTN3-207ENST00000536011 TBC1D30Q9Y2I9 924 aa13.49□□□□□ -0.25
RTN3-207ENST00000536011 SLCO1B1Q9Y6L6 691 aa13.49□□□□□ -0.25
RTN3-207ENST00000536011 TBC1D3DA0A087WVF3 549 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 TBC1D3IA0A087WXS9 549 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 TBC1D3EA0A087X179 549 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 TBC1D3KA0A087X1G2 549 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 TBC1D3FA6NER0 549 aaPredicted RBP13.48□□□□□ -0.25
RTN3-207ENST00000536011 TBC1D3LB9A6J9 549 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 H0Y8X5 98 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 TNFSF14O43557 240 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 MAGEC1O60732 1142 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 RHOCP08134 193 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 TBC1D3HP0C7X1 549 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 PNMA6AP0CW24 399 aaPredicted RBP13.48□□□□□ -0.25
RTN3-207ENST00000536011 UCHL3P15374 230 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 GABRB2P47870 512 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 ARRB1P49407 418 aaPredicted RBP13.48□□□□□ -0.25
RTN3-207ENST00000536011 RNASE9P60153 205 aaKnown RBP13.48□□□□□ -0.25
RTN3-207ENST00000536011 DEUP1Q05D60 604 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 SLC25A52Q3SY17 297 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 C5orf22Q49AR2 442 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 KLHDC7AQ5VTJ3 777 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 TBC1D3GQ6DHY5 549 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 TBC1D3CQ6IPX1 549 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 LAYNQ6UX15 382 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 SETD3Q86TU7 594 aaPredicted RBP13.48□□□□□ -0.25
RTN3-207ENST00000536011 PRPF39Q86UA1 669 aaKnown RBP13.48□□□□□ -0.25
RTN3-207ENST00000536011 TBC1D3Q8IZP1 549 aaPredicted RBP13.48□□□□□ -0.25
RTN3-207ENST00000536011 GALNT15Q8N3T1 639 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 PNPLA1Q8N8W4 532 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 FRS2Q8WU20 508 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 SERAC1Q96JX3 654 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 ELF4Q99607 663 aaPredicted RBP13.48□□□□□ -0.25
RTN3-207ENST00000536011 PLCB1Q9NQ66 1216 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 ARHGEF38Q9NXL2 777 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 FTSJ1Q9UET6 329 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 DMTF1Q9Y222 760 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 HS3ST2Q9Y278 367 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 DAAM1Q9Y4D1 1078 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 FHOD1Q9Y613 1164 aa13.48□□□□□ -0.25
RTN3-207ENST00000536011 ANKRD11Q6UB99 2663 aaPredicted RBP13.48□□□□□ -0.25
RTN3-207ENST00000536011 KNL1Q8NG31 2342 aa13.47□□□□□ -0.25
RTN3-207ENST00000536011 PKD1L2Q7Z442 2459 aa13.47□□□□□ -0.25
RTN3-207ENST00000536011 A0A1B0GTQ1 180 aa13.47□□□□□ -0.25
RTN3-207ENST00000536011 SRRM3A6NNA2 597 aaPredicted RBP13.47□□□□□ -0.25
RTN3-207ENST00000536011 F8VZ95 297 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms