RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 MRM3Q9HC36 420 aaKnown RBP8.19□□□□□ -1.1
COL21A1-212ENST00000535941 SAYSD1Q9NPB0 183 aa8.19□□□□□ -1.1
COL21A1-212ENST00000535941 SMYD2Q9NRG4 433 aa8.19□□□□□ -1.1
COL21A1-212ENST00000535941 NDFIP2Q9NV92 336 aa8.19□□□□□ -1.1
COL21A1-212ENST00000535941 ABI2Q9NYB9 513 aaPredicted RBP8.19□□□□□ -1.1
COL21A1-212ENST00000535941 LRFN2Q9ULH4 789 aa8.19□□□□□ -1.1
COL21A1-212ENST00000535941 PCDHA11Q9Y5I1 949 aa8.19□□□□□ -1.1
COL21A1-212ENST00000535941 ZNF840PA6NDX5 716 aa8.19□□□□□ -1.1
COL21A1-212ENST00000535941 MMP2P08253 660 aa8.19□□□□□ -1.1
COL21A1-212ENST00000535941 DHRS4L1P0CG22 281 aa8.19□□□□□ -1.1
COL21A1-212ENST00000535941 SLC2A3P11169 496 aa8.19□□□□□ -1.1
COL21A1-212ENST00000535941 YWHAQP27348 245 aa8.19□□□□□ -1.1
COL21A1-212ENST00000535941 RANBP1P43487 201 aa8.19□□□□□ -1.1
COL21A1-212ENST00000535941 TPI1P60174 286 aa8.19□□□□□ -1.1
COL21A1-212ENST00000535941 MAGOHP61326 146 aaKnown RBP8.19□□□□□ -1.1
COL21A1-212ENST00000535941 RPL10AP62906 217 aaKnown RBP8.19□□□□□ -1.1
COL21A1-212ENST00000535941 IFFO1Q0D2I5 559 aa8.19□□□□□ -1.1
COL21A1-212ENST00000535941 NR1H3Q13133 447 aa8.19□□□□□ -1.1
COL21A1-212ENST00000535941 MPP2Q14168 576 aa8.19□□□□□ -1.1
COL21A1-212ENST00000535941 IHHQ14623 411 aa8.19□□□□□ -1.1
COL21A1-212ENST00000535941 PSMD5Q16401 504 aa8.19□□□□□ -1.1
COL21A1-212ENST00000535941 TIFABQ6ZNK6 161 aa8.19□□□□□ -1.1
COL21A1-212ENST00000535941 RTL10Q7L3V2 364 aa8.19□□□□□ -1.1
COL21A1-212ENST00000535941 ATP11CQ8NB49 1132 aa8.19□□□□□ -1.1
COL21A1-212ENST00000535941 BTN2A3PQ96KV6 586 aa8.19□□□□□ -1.1
COL21A1-212ENST00000535941 KLF16Q9BXK1 252 aaPredicted RBP8.19□□□□□ -1.1
COL21A1-212ENST00000535941 XAB2Q9HCS7 855 aaKnown RBP8.19□□□□□ -1.1
COL21A1-212ENST00000535941 CTNNAL1Q9UBT7 734 aa8.19□□□□□ -1.1
COL21A1-212ENST00000535941 PRKAG3Q9UGI9 489 aa8.19□□□□□ -1.1
COL21A1-212ENST00000535941 SFMBT1Q9UHJ3 866 aa8.19□□□□□ -1.1
COL21A1-212ENST00000535941 TCRBV9S1A1TA0A576 114 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 MSI1O43347 362 aaKnown RBP8.18□□□□□ -1.1
COL21A1-212ENST00000535941 RHOQP17081 205 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 PFKLP17858 780 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 SERPINB6P35237 376 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 EPHA5P54756 1037 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 LONRF1Q17RB8 773 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 TEX44Q53QW1 395 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 DENND5AQ6IQ26 1287 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 TMEM135Q86UB9 458 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.18□□□□□ -1.1
COL21A1-212ENST00000535941 HERVK_113Q902F9 699 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 PLD4Q96BZ4 506 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 FCRL5Q96RD9 977 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 EBNA1BP2Q99848 306 aaKnown RBP8.18□□□□□ -1.1
COL21A1-212ENST00000535941 ARNT2Q9HBZ2 717 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 TLR8Q9NR97 1041 aaKnown RBP8.18□□□□□ -1.1
COL21A1-212ENST00000535941 HEY1Q9Y5J3 304 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 CDY1Q9Y6F8 540 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 H7C0C1 242 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 MATN3O15232 486 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 ACSL3O95573 720 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 F11P03951 625 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 NEFHP12036 1026 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 LSP1P33241 339 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 ELK3P41970 407 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 ATP5OP48047 213 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 KPNA1P52294 538 aaPredicted RBP8.18□□□□□ -1.1
COL21A1-212ENST00000535941 GEMIN4P57678 1058 aaKnown RBP8.18□□□□□ -1.1
COL21A1-212ENST00000535941 GUCY1A3Q02108 690 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 CREMQ03060 361 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 PDIA2Q13087 525 aaKnown RBP8.18□□□□□ -1.1
COL21A1-212ENST00000535941 NAB1Q13506 487 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 BTG3Q14201 252 aaPredicted RBP8.18□□□□□ -1.1
COL21A1-212ENST00000535941 BTBD8Q5XKL5 378 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 NUGGCQ68CJ6 796 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 HEATR6Q6AI08 1181 aaKnown RBP8.18□□□□□ -1.1
COL21A1-212ENST00000535941 SLC30A9Q6PML9 568 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 MARK2Q7KZI7 788 aaKnown RBP8.18□□□□□ -1.1
COL21A1-212ENST00000535941 MYLK4Q86YV6 388 aaPredicted RBP8.18□□□□□ -1.1
COL21A1-212ENST00000535941 ABI1Q8IZP0 508 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 MPP5Q8N3R9 675 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 ZNF473Q8WTR7 871 aaKnown RBP8.18□□□□□ -1.1
COL21A1-212ENST00000535941 PAWRQ96IZ0 340 aaKnown RBP8.18□□□□□ -1.1
COL21A1-212ENST00000535941 LMLNQ96KR4 655 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 C9orf72Q96LT7 481 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 XPO6Q96QU8 1125 aaKnown RBP8.18□□□□□ -1.1
COL21A1-212ENST00000535941 PPP1R12CQ9BZL4 782 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 EPN3Q9H201 632 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 TMEM39AQ9NV64 488 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 DNMT3BQ9UBC3 853 aaKnown RBP8.18□□□□□ -1.1
COL21A1-212ENST00000535941 NOVA2Q9UNW9 492 aaKnown RBP8.18□□□□□ -1.1
COL21A1-212ENST00000535941 MYO18AQ92614 2054 aaKnown RBP8.18□□□□□ -1.1
COL21A1-212ENST00000535941 REV3LO60673 3130 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.18□□□□□ -1.1
COL21A1-212ENST00000535941 IL1BP01584 269 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 CSF2RAP15509 400 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 MX2P20592 715 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 PBX3P40426 434 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 MAPKAPK2P49137 400 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 NEK3P51956 506 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 TAF10Q12962 218 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 KRT71Q3SY84 523 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 CNTN4Q8IWV2 1026 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 ZBED8Q8IZ13 594 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 STKLD1Q8NE28 680 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 PSMG2Q969U7 264 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 PRICKLE1Q96MT3 831 aaPredicted RBP8.18□□□□□ -1.1
COL21A1-212ENST00000535941 SLC39A8Q9C0K1 460 aa8.18□□□□□ -1.1
COL21A1-212ENST00000535941 CAPN9O14815 690 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms