RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 ZNF599Q96NL3 588 aa16.64■□□□□ 0.25
VAMP1-205ENST00000535927 PSMB7Q99436 277 aa16.64■□□□□ 0.25
VAMP1-205ENST00000535927 FEM1AQ9BSK4 669 aa16.64■□□□□ 0.25
VAMP1-205ENST00000535927 C2orf49Q9BVC5 232 aaPredicted RBP16.64■□□□□ 0.25
VAMP1-205ENST00000535927 HEMGNQ9BXL5 484 aa16.64■□□□□ 0.25
VAMP1-205ENST00000535927 ACE2Q9BYF1 805 aaPredicted RBP16.64■□□□□ 0.25
VAMP1-205ENST00000535927 KLC2Q9H0B6 622 aa16.64■□□□□ 0.25
VAMP1-205ENST00000535927 WNT16Q9UBV4 365 aa16.64■□□□□ 0.25
VAMP1-205ENST00000535927 AMACRQ9UHK6 382 aa16.64■□□□□ 0.25
VAMP1-205ENST00000535927 RASA4BC9J798 803 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 MCF2LO15068 1137 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 FANCGO15287 622 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 RASA4O43374 803 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 KDELR3O43731 214 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 ASLP04424 464 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 CISD3P0C7P0 127 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 SP100P23497 879 aaPredicted RBP16.63■□□□□ 0.25
VAMP1-205ENST00000535927 GRIA2P42262 883 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 VCPP55072 806 aaKnown RBP16.63■□□□□ 0.25
VAMP1-205ENST00000535927 PRKCQQ04759 706 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 RFTN1Q14699 578 aaPredicted RBP16.63■□□□□ 0.25
VAMP1-205ENST00000535927 NOMO1Q15155 1222 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 CYP1B1Q16678 543 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 TRIM68Q6AZZ1 485 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 GRAMD4Q6IC98 578 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 CXorf57Q6NSI4 855 aaKnown RBP16.63■□□□□ 0.25
VAMP1-205ENST00000535927 RETSATQ6NUM9 610 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 ZNF572Q7Z3I7 529 aaPredicted RBP16.63■□□□□ 0.25
VAMP1-205ENST00000535927 ANKS1BQ7Z6G8 1248 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 TFAP2DQ7Z6R9 452 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 DCAF4L2Q8NA75 395 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 UCMAQ8WVF2 138 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 RSAD2Q8WXG1 361 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 ARHGEF2Q92974 986 aaKnown RBP16.63■□□□□ 0.25
VAMP1-205ENST00000535927 MYEOVQ96EZ4 313 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 SHDQ96IW2 340 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 ZFYVE19Q96K21 471 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 LMLNQ96KR4 655 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 OLFM3Q96PB7 478 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 PNKPQ96T60 521 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 VAT1Q99536 393 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 DTLQ9NZJ0 730 aa16.63■□□□□ 0.25
VAMP1-205ENST00000535927 KRIT1O00522 736 aa16.62■□□□□ 0.25
VAMP1-205ENST00000535927 SCAMP3O14828 347 aaKnown RBP16.62■□□□□ 0.25
VAMP1-205ENST00000535927 TULP3O75386 442 aa16.62■□□□□ 0.25
VAMP1-205ENST00000535927 ATP5BP06576 529 aaKnown RBP16.62■□□□□ 0.25
VAMP1-205ENST00000535927 PABPC1P11940 636 aaKnown RBP16.62■□□□□ 0.25
VAMP1-205ENST00000535927 GARSP41250 739 aaKnown RBP16.62■□□□□ 0.25
VAMP1-205ENST00000535927 TNFRSF4P43489 277 aa16.62■□□□□ 0.25
VAMP1-205ENST00000535927 SGSHP51688 502 aa16.62■□□□□ 0.25
VAMP1-205ENST00000535927 TNK2Q07912 1038 aa16.62■□□□□ 0.25
VAMP1-205ENST00000535927 IL10RBQ08334 325 aa16.62■□□□□ 0.25
VAMP1-205ENST00000535927 SERINC3Q13530 473 aa16.62■□□□□ 0.25
VAMP1-205ENST00000535927 CEP112Q8N8E3 955 aa16.62■□□□□ 0.25
VAMP1-205ENST00000535927 C12orf50Q8NA57 414 aaPredicted RBP16.62■□□□□ 0.25
VAMP1-205ENST00000535927 ACTL9Q8TC94 416 aa16.62■□□□□ 0.25
VAMP1-205ENST00000535927 NSMCE1Q8WV22 266 aa16.62■□□□□ 0.25
VAMP1-205ENST00000535927 NKD2Q969F2 451 aaPredicted RBP16.62■□□□□ 0.25
VAMP1-205ENST00000535927 TTC17Q96AE7 1141 aa16.62■□□□□ 0.25
VAMP1-205ENST00000535927 NELL2Q99435 816 aa16.62■□□□□ 0.25
VAMP1-205ENST00000535927 MUC3BQ9H195 1237 aa16.62■□□□□ 0.25
VAMP1-205ENST00000535927 ETNK2Q9NVF9 386 aa16.62■□□□□ 0.25
VAMP1-205ENST00000535927 DNAJC17Q9NVM6 304 aaKnown RBP16.62■□□□□ 0.25
VAMP1-205ENST00000535927 GTSE1Q9NYZ3 720 aa16.62■□□□□ 0.25
VAMP1-205ENST00000535927 HEY1Q9Y5J3 304 aa16.62■□□□□ 0.25
VAMP1-205ENST00000535927 OR51B4Q9Y5P0 310 aa16.62■□□□□ 0.25
VAMP1-205ENST00000535927 MRFAP1Q9Y605 127 aa16.62■□□□□ 0.25
VAMP1-205ENST00000535927 F5P12259 2224 aa16.61■□□□□ 0.25
VAMP1-205ENST00000535927 BCLAF3A2AJT9 711 aaKnown RBP16.61■□□□□ 0.25
VAMP1-205ENST00000535927 APODP05090 189 aa16.61■□□□□ 0.25
VAMP1-205ENST00000535927 DRD1P21728 446 aa16.61■□□□□ 0.25
VAMP1-205ENST00000535927 HLA-FP30511 346 aa16.61■□□□□ 0.25
VAMP1-205ENST00000535927 CHRNA3P32297 505 aa16.61■□□□□ 0.25
VAMP1-205ENST00000535927 FNTAP49354 379 aa16.61■□□□□ 0.25
VAMP1-205ENST00000535927 OTUD4Q01804 1114 aaKnown RBP16.61■□□□□ 0.25
VAMP1-205ENST00000535927 PPIDQ08752 370 aaKnown RBP16.61■□□□□ 0.25
VAMP1-205ENST00000535927 HNRNPDQ14103 355 aaKnown RBP16.61■□□□□ 0.25
VAMP1-205ENST00000535927 GAB4Q2WGN9 574 aa16.61■□□□□ 0.25
VAMP1-205ENST00000535927 PLEKHG6Q3KR16 790 aa16.61■□□□□ 0.25
VAMP1-205ENST00000535927 INO80DQ53TQ3 878 aaPredicted RBP16.61■□□□□ 0.25
VAMP1-205ENST00000535927 RNF219Q5W0B1 726 aaPredicted RBP16.61■□□□□ 0.25
VAMP1-205ENST00000535927 C4orf22Q6V702 233 aa16.61■□□□□ 0.25
VAMP1-205ENST00000535927 CDKL3Q8IVW4 592 aaPredicted RBP16.61■□□□□ 0.25
VAMP1-205ENST00000535927 ARHGAP12Q8IWW6 846 aa16.61■□□□□ 0.25
VAMP1-205ENST00000535927 BBS5Q8N3I7 341 aa16.61■□□□□ 0.25
VAMP1-205ENST00000535927 ATPAF2Q8N5M1 289 aa16.61■□□□□ 0.25
VAMP1-205ENST00000535927 SLC35B2Q8TB61 432 aa16.61■□□□□ 0.25
VAMP1-205ENST00000535927 GRK7Q8WTQ7 553 aa16.61■□□□□ 0.25
VAMP1-205ENST00000535927 TFB1MQ8WVM0 346 aaKnown RBP16.61■□□□□ 0.25
VAMP1-205ENST00000535927 ALG14Q96F25 216 aa16.61■□□□□ 0.25
VAMP1-205ENST00000535927 SLC39A8Q9C0K1 460 aa16.61■□□□□ 0.25
VAMP1-205ENST00000535927 NOL6Q9H6R4 1146 aaKnown RBP16.61■□□□□ 0.25
VAMP1-205ENST00000535927 PLK2Q9NYY3 685 aa16.61■□□□□ 0.25
VAMP1-205ENST00000535927 GGA2Q9UJY4 613 aa16.61■□□□□ 0.25
VAMP1-205ENST00000535927 MRPS17Q9Y2R5 130 aaKnown RBP16.61■□□□□ 0.25
VAMP1-205ENST00000535927 STARD13Q9Y3M8 1113 aa16.61■□□□□ 0.25
VAMP1-205ENST00000535927 OTOL1A6NHN0 477 aaPredicted RBP16.6■□□□□ 0.25
VAMP1-205ENST00000535927 SPECC1L-ADORA2AF8WAN1 911 aa16.6■□□□□ 0.25
VAMP1-205ENST00000535927 ZNF185O15231 689 aa16.6■□□□□ 0.25
VAMP1-205ENST00000535927 GPR37L1O60883 481 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms