RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 TTC34A8MYJ7 566 aa23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 EIF3CLB5ME19 914 aaKnown RBP23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 ZBTB24O43167 697 aaPredicted RBP23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 SNAP91O60641 907 aa23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 PROSCO94903 275 aa23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 HTR7P34969 479 aa23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 SLC25A11Q02978 314 aaKnown RBP23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 GNA12Q03113 381 aa23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 SIM2Q14190 667 aaPredicted RBP23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 HNRNPA1L2Q32P51 320 aaKnown RBP23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 USP39Q53GS9 565 aaKnown RBP23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 TXNRD3NBQ6F5E7 133 aa23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 ASCL5Q7RTU5 278 aa23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 CPNE8Q86YQ8 564 aa23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 TMTC1Q8IUR5 882 aa23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 SPC24Q8NBT2 197 aa23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 SLC35G2Q8TBE7 412 aa23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 EIF3CQ99613 913 aaKnown RBP23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 PRSS16Q9NQE7 514 aa23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 SUN2Q9UH99 717 aa23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 DNAI1Q9UI46 699 aa23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 VPS51Q9UID3 782 aa23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 SMG5Q9UPR3 1016 aaKnown RBP23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 INVSQ9Y283 1065 aa23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 PIEZO1Q92508 2521 aa23.3■■□□□ 1.32
SFSWAP-204ENST00000535399 PRR23AA6NEV1 266 aa23.29■■□□□ 1.32
SFSWAP-204ENST00000535399 SOWAHDA6NJG2 315 aa23.29■■□□□ 1.32
SFSWAP-204ENST00000535399 DCLK1O15075 740 aa23.29■■□□□ 1.32
SFSWAP-204ENST00000535399 MTA2O94776 668 aa23.29■■□□□ 1.32
SFSWAP-204ENST00000535399 LMNAP02545 664 aaKnown RBP23.29■■□□□ 1.32
SFSWAP-204ENST00000535399 C7P10643 843 aa23.29■■□□□ 1.32
SFSWAP-204ENST00000535399 P2RY2P41231 377 aa23.29■■□□□ 1.32
SFSWAP-204ENST00000535399 MAP7D1Q3KQU3 841 aa23.29■■□□□ 1.32
SFSWAP-204ENST00000535399 BOLA3Q53S33 107 aa23.29■■□□□ 1.32
SFSWAP-204ENST00000535399 OR2T3Q8NH03 318 aa23.29■■□□□ 1.32
SFSWAP-204ENST00000535399 RLN3Q8WXF3 142 aa23.29■■□□□ 1.32
SFSWAP-204ENST00000535399 C2orf49Q9BVC5 232 aaPredicted RBP23.29■■□□□ 1.32
SFSWAP-204ENST00000535399 NOL6Q9H6R4 1146 aaKnown RBP23.29■■□□□ 1.32
SFSWAP-204ENST00000535399 ATP9BO43861 1147 aa23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 ZMPSTE24O75844 475 aa23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 RARAP10276 462 aa23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 GLDCP23378 1020 aa23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 CYLC1P35663 651 aaPredicted RBP23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 ACVRL1P37023 503 aa23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 MAGEA1P43355 309 aa23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 TPI1P60174 286 aa23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 KRT83P78385 493 aa23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 TCEAL1Q15170 157 aa23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 SMTNL2Q2TAL5 461 aa23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 KCNT1Q5JUK3 1230 aa23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 C9orf64Q5T6V5 341 aa23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 KIAA1324Q6UXG2 1013 aaKnown RBP23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 CEP68Q76N32 757 aa23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 TMPRSS6Q8IU80 811 aa23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 FRS2Q8WU20 508 aa23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 TEKT4Q8WW24 435 aa23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 RFFLQ8WZ73 363 aa23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 SPON2Q9BUD6 331 aa23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 ACE2Q9BYF1 805 aaPredicted RBP23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 CATSPERBQ9H7T0 1116 aa23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 ZWILCHQ9H900 591 aa23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 SLC25A13Q9UJS0 675 aa23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 HS3ST2Q9Y278 367 aa23.28■■□□□ 1.32
SFSWAP-204ENST00000535399 EEF2KO00418 725 aaKnown RBP23.27■■□□□ 1.32
SFSWAP-204ENST00000535399 FGF10O15520 208 aaPredicted RBP23.27■■□□□ 1.32
SFSWAP-204ENST00000535399 SIN3BO75182 1162 aa23.27■■□□□ 1.32
SFSWAP-204ENST00000535399 MT-CO1P00395 513 aa23.27■■□□□ 1.32
SFSWAP-204ENST00000535399 DPYSL2Q16555 572 aa23.27■■□□□ 1.32
SFSWAP-204ENST00000535399 RAD9BQ6WBX8 426 aa23.27■■□□□ 1.32
SFSWAP-204ENST00000535399 PRR23BQ6ZRT6 265 aa23.27■■□□□ 1.32
SFSWAP-204ENST00000535399 KBTBD6Q86V97 674 aa23.27■■□□□ 1.32
SFSWAP-204ENST00000535399 TMEM139Q8IV31 216 aa23.27■■□□□ 1.32
SFSWAP-204ENST00000535399 RHOT2Q8IXI1 618 aa23.27■■□□□ 1.32
SFSWAP-204ENST00000535399 ARHGEF2Q92974 986 aaKnown RBP23.27■■□□□ 1.32
SFSWAP-204ENST00000535399 MAGEH1Q9H213 219 aa23.27■■□□□ 1.32
SFSWAP-204ENST00000535399 FBRSQ9HAH7 460 aa23.27■■□□□ 1.32
SFSWAP-204ENST00000535399 PRDM16Q9HAZ2 1276 aa23.27■■□□□ 1.32
SFSWAP-204ENST00000535399 ATP13A1Q9HD20 1204 aa23.27■■□□□ 1.32
SFSWAP-204ENST00000535399 LCMT1Q9UIC8 334 aa23.27■■□□□ 1.32
SFSWAP-204ENST00000535399 PCDHA13Q9Y5I0 950 aa23.27■■□□□ 1.32
SFSWAP-204ENST00000535399 EPN1Q9Y6I3 576 aaPredicted RBP23.27■■□□□ 1.32
SFSWAP-204ENST00000535399 DOCK4Q8N1I0 1966 aa23.27■■□□□ 1.32
SFSWAP-204ENST00000535399 EDDM13A0A1B0GTR0 161 aa23.26■■□□□ 1.31
SFSWAP-204ENST00000535399 TARSL2A2RTX5 802 aaKnown RBP23.26■■□□□ 1.31
SFSWAP-204ENST00000535399 RAMP2O60895 175 aa23.26■■□□□ 1.31
SFSWAP-204ENST00000535399 VAV1P15498 845 aa23.26■■□□□ 1.31
SFSWAP-204ENST00000535399 GOT1P17174 413 aa23.26■■□□□ 1.31
SFSWAP-204ENST00000535399 BCKDHBP21953 392 aa23.26■■□□□ 1.31
SFSWAP-204ENST00000535399 MAN1A1P33908 653 aa23.26■■□□□ 1.31
SFSWAP-204ENST00000535399 ETFBP38117 255 aa23.26■■□□□ 1.31
SFSWAP-204ENST00000535399 NNMTP40261 264 aa23.26■■□□□ 1.31
SFSWAP-204ENST00000535399 ZNF135P52742 658 aaPredicted RBP23.26■■□□□ 1.31
SFSWAP-204ENST00000535399 LPAL2Q16609 132 aa23.26■■□□□ 1.31
SFSWAP-204ENST00000535399 PPP6R3Q5H9R7 873 aaPredicted RBP23.26■■□□□ 1.31
SFSWAP-204ENST00000535399 RFX8Q6ZV50 586 aa23.26■■□□□ 1.31
SFSWAP-204ENST00000535399 METTL3Q86U44 580 aaKnown RBP23.26■■□□□ 1.31
SFSWAP-204ENST00000535399 SH2D3CQ8N5H7 860 aa23.26■■□□□ 1.31
SFSWAP-204ENST00000535399 FRMD1Q8N878 549 aa23.26■■□□□ 1.31
SFSWAP-204ENST00000535399 HSPH1Q92598 858 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms