RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 GRHPRQ9UBQ7 328 aa5.6□□□□□ -1.51
PRKDC-205ENST00000535375 KCND3Q9UK17 655 aa5.6□□□□□ -1.51
PRKDC-205ENST00000535375 RPS10-NUDT3A0A1W2PQS6 291 aa5.59□□□□□ -1.51
PRKDC-205ENST00000535375 hCG_1642624A0A1W2PR95 340 aa5.59□□□□□ -1.51
PRKDC-205ENST00000535375 GAGE12JA6NER3 117 aa5.59□□□□□ -1.51
PRKDC-205ENST00000535375 E7EVH7 732 aa5.59□□□□□ -1.51
PRKDC-205ENST00000535375 CCNT1O60563 726 aaKnown RBP5.59□□□□□ -1.51
PRKDC-205ENST00000535375 KRT38O76015 456 aa5.59□□□□□ -1.51
PRKDC-205ENST00000535375 KLKB1P03952 638 aa5.59□□□□□ -1.51
PRKDC-205ENST00000535375 CHKAP35790 457 aa5.59□□□□□ -1.51
PRKDC-205ENST00000535375 CDKN2AP42771 156 aaKnown RBP5.59□□□□□ -1.51
PRKDC-205ENST00000535375 RBM5P52756 815 aaKnown RBP eCLIP5.59□□□□□ -1.51
PRKDC-205ENST00000535375 PGGT1BP53609 377 aa5.59□□□□□ -1.51
PRKDC-205ENST00000535375 RHAGQ02094 409 aa5.59□□□□□ -1.51
PRKDC-205ENST00000535375 PDCLQ13371 301 aa5.59□□□□□ -1.51
PRKDC-205ENST00000535375 BIRC2Q13490 618 aa5.59□□□□□ -1.51
PRKDC-205ENST00000535375 WASHC2DQ5SRD0 308 aa5.59□□□□□ -1.51
PRKDC-205ENST00000535375 FAM171A1Q5VUB5 890 aa5.59□□□□□ -1.51
PRKDC-205ENST00000535375 TANGO2Q6ICL3 276 aa5.59□□□□□ -1.51
PRKDC-205ENST00000535375 AAGABQ6PD74 315 aa5.59□□□□□ -1.51
PRKDC-205ENST00000535375 SYT13Q7L8C5 426 aa5.59□□□□□ -1.51
PRKDC-205ENST00000535375 CAMK1DQ8IU85 385 aa5.59□□□□□ -1.51
PRKDC-205ENST00000535375 TMEM217Q8N7C4 229 aa5.59□□□□□ -1.51
PRKDC-205ENST00000535375 HDHD5Q9BXW7 423 aa5.59□□□□□ -1.51
PRKDC-205ENST00000535375 ISCUQ9H1K1 167 aa5.59□□□□□ -1.51
PRKDC-205ENST00000535375 ABHD16BQ9H3Z7 469 aa5.59□□□□□ -1.51
PRKDC-205ENST00000535375 ACTR5Q9H9F9 607 aaPredicted RBP5.59□□□□□ -1.51
PRKDC-205ENST00000535375 MRPL44Q9H9J2 332 aaKnown RBP5.59□□□□□ -1.51
PRKDC-205ENST00000535375 IL21RQ9HBE5 538 aa5.59□□□□□ -1.51
PRKDC-205ENST00000535375 SAYSD1Q9NPB0 183 aa5.59□□□□□ -1.51
PRKDC-205ENST00000535375 SIRT3Q9NTG7 399 aaPredicted RBP5.59□□□□□ -1.51
PRKDC-205ENST00000535375 TMEM247A6NEH6 219 aa5.58□□□□□ -1.52
PRKDC-205ENST00000535375 FAM90A8PA6NJQ4 464 aa5.58□□□□□ -1.52
PRKDC-205ENST00000535375 FAM90A13PP0C7W8 464 aa5.58□□□□□ -1.52
PRKDC-205ENST00000535375 FAM90A24PP0C7X0 464 aa5.58□□□□□ -1.52
PRKDC-205ENST00000535375 DCTN1Q14203 1278 aa5.58□□□□□ -1.52
PRKDC-205ENST00000535375 GXYLT1Q4G148 440 aa5.58□□□□□ -1.52
PRKDC-205ENST00000535375 PARM1Q6UWI2 310 aa5.58□□□□□ -1.52
PRKDC-205ENST00000535375 FAM217AQ8IXS0 508 aa5.58□□□□□ -1.52
PRKDC-205ENST00000535375 PTGR2Q8N8N7 351 aaPredicted RBP5.58□□□□□ -1.52
PRKDC-205ENST00000535375 ASB5Q8WWX0 329 aa5.58□□□□□ -1.52
PRKDC-205ENST00000535375 LYZL4Q96KX0 146 aa5.58□□□□□ -1.52
PRKDC-205ENST00000535375 DDX23Q9BUQ8 820 aaKnown RBP5.58□□□□□ -1.52
PRKDC-205ENST00000535375 SF3B5Q9BWJ5 86 aaKnown RBP5.58□□□□□ -1.52
PRKDC-205ENST00000535375 CLPBQ9H078 707 aa5.58□□□□□ -1.52
PRKDC-205ENST00000535375 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.58□□□□□ -1.52
PRKDC-205ENST00000535375 COMMD10Q9Y6G5 202 aa5.58□□□□□ -1.52
PRKDC-205ENST00000535375 SLC4A4Q9Y6R1 1079 aa5.58□□□□□ -1.52
PRKDC-205ENST00000535375 IGKV2D-30A0A075B6S6 120 aa5.57□□□□□ -1.52
PRKDC-205ENST00000535375 KRTAP29-1A8MX34 341 aaPredicted RBP5.57□□□□□ -1.52
PRKDC-205ENST00000535375 SYN3O14994 580 aa5.57□□□□□ -1.52
PRKDC-205ENST00000535375 CHN1P15882 459 aa5.57□□□□□ -1.52
PRKDC-205ENST00000535375 CST5P28325 142 aaPredicted RBP5.57□□□□□ -1.52
PRKDC-205ENST00000535375 AARSP49588 968 aaKnown RBP eCLIP5.57□□□□□ -1.52
PRKDC-205ENST00000535375 HTR6P50406 440 aa5.57□□□□□ -1.52
PRKDC-205ENST00000535375 RPS6KA3P51812 740 aa5.57□□□□□ -1.52
PRKDC-205ENST00000535375 ZBTB16Q05516 673 aa5.57□□□□□ -1.52
PRKDC-205ENST00000535375 PRKG1Q13976 671 aa5.57□□□□□ -1.52
PRKDC-205ENST00000535375 SEMA3AQ14563 771 aa5.57□□□□□ -1.52
PRKDC-205ENST00000535375 PLK5Q496M5 336 aa5.57□□□□□ -1.52
PRKDC-205ENST00000535375 C5orf22Q49AR2 442 aa5.57□□□□□ -1.52
PRKDC-205ENST00000535375 LRRC24Q50LG9 513 aa5.57□□□□□ -1.52
PRKDC-205ENST00000535375 Q5PR19 223 aa5.57□□□□□ -1.52
PRKDC-205ENST00000535375 VWA5B1Q5TIE3 1220 aa5.57□□□□□ -1.52
PRKDC-205ENST00000535375 MTFR2Q6P444 385 aa5.57□□□□□ -1.52
PRKDC-205ENST00000535375 SLC16A12Q6ZSM3 486 aa5.57□□□□□ -1.52
PRKDC-205ENST00000535375 MYCT1Q8N699 235 aa5.57□□□□□ -1.52
PRKDC-205ENST00000535375 CMASQ8NFW8 434 aaPredicted RBP5.57□□□□□ -1.52
PRKDC-205ENST00000535375 RPS6KC1Q96S38 1066 aa5.57□□□□□ -1.52
PRKDC-205ENST00000535375 MAP6D1Q9H9H5 199 aa5.57□□□□□ -1.52
PRKDC-205ENST00000535375 HIF1ANQ9NWT6 349 aa5.57□□□□□ -1.52
PRKDC-205ENST00000535375 KLQ9UEF7 1012 aa5.57□□□□□ -1.52
PRKDC-205ENST00000535375 NPIPB13A6NJU9 1138 aa5.56□□□□□ -1.52
PRKDC-205ENST00000535375 NPIPB5A8MRT5 1133 aa5.56□□□□□ -1.52
PRKDC-205ENST00000535375 NPIPB4C9JG80 1138 aa5.56□□□□□ -1.52
PRKDC-205ENST00000535375 IPO5O00410 1097 aaKnown RBP5.56□□□□□ -1.52
PRKDC-205ENST00000535375 TNFRSF13BO14836 293 aaPredicted RBP5.56□□□□□ -1.52
PRKDC-205ENST00000535375 T-ENOLP0DO92 83 aa5.56□□□□□ -1.52
PRKDC-205ENST00000535375 CYP4B1P13584 511 aa5.56□□□□□ -1.52
PRKDC-205ENST00000535375 HOXB2P14652 356 aa5.56□□□□□ -1.52
PRKDC-205ENST00000535375 ENTPD1P49961 510 aa5.56□□□□□ -1.52
PRKDC-205ENST00000535375 KRT72Q14CN4 511 aa5.56□□□□□ -1.52
PRKDC-205ENST00000535375 RUNDC3AQ59EK9 446 aa5.56□□□□□ -1.52
PRKDC-205ENST00000535375 C10orf62Q5T681 223 aaPredicted RBP5.56□□□□□ -1.52
PRKDC-205ENST00000535375 GPSM1Q86YR5 675 aa5.56□□□□□ -1.52
PRKDC-205ENST00000535375 PELI3Q8N2H9 469 aa5.56□□□□□ -1.52
PRKDC-205ENST00000535375 GALNT15Q8N3T1 639 aa5.56□□□□□ -1.52
PRKDC-205ENST00000535375 C7orf57Q8NEG2 295 aa5.56□□□□□ -1.52
PRKDC-205ENST00000535375 CSGALNACT1Q8TDX6 532 aa5.56□□□□□ -1.52
PRKDC-205ENST00000535375 TRAPPC12Q8WVT3 735 aa5.56□□□□□ -1.52
PRKDC-205ENST00000535375 INPP5DQ92835 1189 aa5.56□□□□□ -1.52
PRKDC-205ENST00000535375 THOC3Q96J01 351 aaKnown RBP5.56□□□□□ -1.52
PRKDC-205ENST00000535375 MARK4Q96L34 752 aa5.56□□□□□ -1.52
PRKDC-205ENST00000535375 IFT27Q9BW83 186 aa5.56□□□□□ -1.52
PRKDC-205ENST00000535375 CADM1Q9BY67 442 aaKnown RBP5.56□□□□□ -1.52
PRKDC-205ENST00000535375 HIPK3Q9H422 1215 aa5.56□□□□□ -1.52
PRKDC-205ENST00000535375 Q9N2J8 555 aa5.56□□□□□ -1.52
PRKDC-205ENST00000535375 KRCC1Q9NPI7 259 aaPredicted RBP5.56□□□□□ -1.52
PRKDC-205ENST00000535375 TMEM248Q9NWD8 314 aa5.56□□□□□ -1.52
PRKDC-205ENST00000535375 SRP68Q9UHB9 627 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms