RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 VCLP18206 1134 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 TCN1P20061 433 aaPredicted RBP19.74■□□□□ 0.75
CAPN1-226ENST00000533820 GRK2P25098 689 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 GNL1P36915 607 aaPredicted RBP19.74■□□□□ 0.75
CAPN1-226ENST00000533820 FAM72AQ5TYM5 149 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 SYPL2Q5VXT5 272 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 TMEM198Q66K66 360 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 FAM72DQ6L9T8 149 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 FAM72BQ86X60 149 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 CDHR5Q9HBB8 845 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 CACNG4Q9UBN1 327 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 SSX2IPQ9Y2D8 614 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 TKTP29401 623 aaKnown RBP19.74■□□□□ 0.75
CAPN1-226ENST00000533820 BST2Q10589 180 aaKnown RBP19.74■□□□□ 0.75
CAPN1-226ENST00000533820 KLF10Q13118 480 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 ACMSDQ8TDX5 336 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 OLFM3Q96PB7 478 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 SLC39A10Q9ULF5 831 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 INPP5FQ9Y2H2 1132 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 TRIM43BA6NCK2 446 aa19.73■□□□□ 0.75
CAPN1-226ENST00000533820 TK2O00142 265 aa19.73■□□□□ 0.75
CAPN1-226ENST00000533820 SPTLC1O15269 473 aa19.73■□□□□ 0.75
CAPN1-226ENST00000533820 PHGDHO43175 533 aaKnown RBP19.73■□□□□ 0.75
CAPN1-226ENST00000533820 CCNT2O60583 730 aaKnown RBP19.73■□□□□ 0.75
CAPN1-226ENST00000533820 GRIA2P42262 883 aa19.73■□□□□ 0.75
CAPN1-226ENST00000533820 LIN52Q52LA3 116 aa19.73■□□□□ 0.75
CAPN1-226ENST00000533820 C4orf22Q6V702 233 aa19.73■□□□□ 0.75
CAPN1-226ENST00000533820 CATSPER4Q7RTX7 472 aa19.73■□□□□ 0.75
CAPN1-226ENST00000533820 PIGZQ86VD9 579 aa19.73■□□□□ 0.75
CAPN1-226ENST00000533820 SNX32Q86XE0 403 aa19.73■□□□□ 0.75
CAPN1-226ENST00000533820 TDRD5Q8NAT2 981 aaKnown RBP19.73■□□□□ 0.75
CAPN1-226ENST00000533820 ACTRT2Q8TDY3 377 aa19.73■□□□□ 0.75
CAPN1-226ENST00000533820 NACA2Q9H009 215 aa19.73■□□□□ 0.75
CAPN1-226ENST00000533820 FZD9O00144 591 aa19.73■□□□□ 0.75
CAPN1-226ENST00000533820 BEST1O76090 585 aa19.73■□□□□ 0.75
CAPN1-226ENST00000533820 BAG6P46379 1132 aa19.73■□□□□ 0.75
CAPN1-226ENST00000533820 SLC26A2P50443 739 aa19.73■□□□□ 0.75
CAPN1-226ENST00000533820 HFE2Q6ZVN8 426 aa19.73■□□□□ 0.75
CAPN1-226ENST00000533820 ST13P4Q8IZP2 240 aaPredicted RBP19.73■□□□□ 0.75
CAPN1-226ENST00000533820 NUF2Q9BZD4 464 aa19.73■□□□□ 0.75
CAPN1-226ENST00000533820 CHRAC1Q9NRG0 131 aa19.73■□□□□ 0.75
CAPN1-226ENST00000533820 HSFX1Q9UBD0 423 aa19.73■□□□□ 0.75
CAPN1-226ENST00000533820 PCDHGB4Q9UN71 923 aa19.73■□□□□ 0.75
CAPN1-226ENST00000533820 SORCS3Q9UPU3 1222 aa19.73■□□□□ 0.75
CAPN1-226ENST00000533820 PCDHGB5Q9Y5G0 923 aa19.73■□□□□ 0.75
CAPN1-226ENST00000533820 SNX10Q9Y5X0 201 aa19.73■□□□□ 0.75
CAPN1-226ENST00000533820 USP3Q9Y6I4 520 aa19.73■□□□□ 0.75
CAPN1-226ENST00000533820 MYOCOSA0A1B0GUC4 107 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 LSM1O15116 133 aaKnown RBP19.72■□□□□ 0.75
CAPN1-226ENST00000533820 ADCYAP1R1P41586 468 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 CDK7P50613 346 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 MRPS22P82650 360 aaKnown RBP19.72■□□□□ 0.75
CAPN1-226ENST00000533820 ARHGAP1Q07960 439 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 SATL1Q86VE3 508 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 FBXW8Q8N3Y1 598 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 ANKRD52Q8NB46 1076 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 SNX25Q9H3E2 840 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 ARHGAP26Q9UNA1 814 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 WDR37Q9Y2I8 494 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 FIS1Q9Y3D6 152 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 GMEB1Q9Y692 573 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 STX16-NPEPL1H3BU86 382 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 IGFBP6P24592 240 aaPredicted RBP19.72■□□□□ 0.75
CAPN1-226ENST00000533820 GARSP41250 739 aaKnown RBP19.72■□□□□ 0.75
CAPN1-226ENST00000533820 BCAT1P54687 386 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 FAM187BQ17R55 369 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 PGM2L1Q6PCE3 622 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 FBXL19Q6PCT2 694 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 ARMCX2Q7L311 632 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 SMYD1Q8NB12 490 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 CENPIQ92674 756 aaPredicted RBP19.72■□□□□ 0.75
CAPN1-226ENST00000533820 C11orf84Q9BUA3 381 aaPredicted RBP19.72■□□□□ 0.75
CAPN1-226ENST00000533820 IARS2Q9NSE4 1012 aaKnown RBP19.72■□□□□ 0.75
CAPN1-226ENST00000533820 SETD4Q9NVD3 440 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 DNAJC28Q9NX36 388 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 CLIC5Q9NZA1 410 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 FZD10Q9ULW2 581 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 C2P06681 752 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 UQCRBP14927 111 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 LSAMPQ13449 338 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 ITGA7Q13683 1181 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 ZNF484Q5JVG2 852 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 NOL9Q5SY16 702 aaKnown RBP19.72■□□□□ 0.75
CAPN1-226ENST00000533820 AAGABQ6PD74 315 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 NANOGNBQ7Z5D8 188 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 NMD3Q96D46 503 aaKnown RBP19.72■□□□□ 0.75
CAPN1-226ENST00000533820 SCYL1Q96KG9 808 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 OSMRQ99650 979 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 ARPC5LQ9BPX5 153 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 GATA5Q9BWX5 397 aaPredicted RBP19.72■□□□□ 0.75
CAPN1-226ENST00000533820 CDH19Q9H159 772 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 TCF7L2Q9NQB0 619 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 C20orf96Q9NUD7 363 aaPredicted RBP19.72■□□□□ 0.75
CAPN1-226ENST00000533820 GPRC5DQ9NZD1 345 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 VANGL2Q9ULK5 521 aa19.72■□□□□ 0.75
CAPN1-226ENST00000533820 SF3B1O75533 1304 aaKnown RBP eCLIP19.71■□□□□ 0.753e-6■■■■■ 68.7
CAPN1-226ENST00000533820 BOLA2-SMG1P6H3BVE0 249 aa19.71■□□□□ 0.75
CAPN1-226ENST00000533820 EEF2KO00418 725 aaKnown RBP19.71■□□□□ 0.75
CAPN1-226ENST00000533820 ENO3P13929 434 aaPredicted RBP19.71■□□□□ 0.75
CAPN1-226ENST00000533820 CDK18Q07002 472 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms