RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 GEN1Q17RS7 908 aa22.36■■□□□ 1.17
VPS51-212ENST00000533656 PLEKHG6Q3KR16 790 aa22.36■■□□□ 1.17
VPS51-212ENST00000533656 PARP15Q460N3 678 aa22.36■■□□□ 1.17
VPS51-212ENST00000533656 ANKRD20A8PQ5CZ79 823 aa22.36■■□□□ 1.17
VPS51-212ENST00000533656 ZNF687Q8N1G0 1237 aa22.36■■□□□ 1.17
VPS51-212ENST00000533656 PJA1Q8NG27 643 aa22.36■■□□□ 1.17
VPS51-212ENST00000533656 MAK16Q9BXY0 300 aaKnown RBP22.36■■□□□ 1.17
VPS51-212ENST00000533656 MUC3BQ9H195 1237 aa22.36■■□□□ 1.17
VPS51-212ENST00000533656 NDRG2Q9UN36 371 aaKnown RBP22.36■■□□□ 1.17
VPS51-212ENST00000533656 SPTBN4Q9H254 2564 aa22.36■■□□□ 1.17
VPS51-212ENST00000533656 FAM170BA6NMN3 283 aa22.35■■□□□ 1.17
VPS51-212ENST00000533656 TRIM24O15164 1050 aa22.35■■□□□ 1.17
VPS51-212ENST00000533656 ATP5BP06576 529 aaKnown RBP22.35■■□□□ 1.17
VPS51-212ENST00000533656 POLR2EP19388 210 aaKnown RBP22.35■■□□□ 1.17
VPS51-212ENST00000533656 CD72P21854 359 aa22.35■■□□□ 1.17
VPS51-212ENST00000533656 MARCKSL1P49006 195 aa22.35■■□□□ 1.17
VPS51-212ENST00000533656 GNA12Q03113 381 aa22.35■■□□□ 1.17
VPS51-212ENST00000533656 TFDP2Q14188 446 aa22.35■■□□□ 1.17
VPS51-212ENST00000533656 RPS6KA1Q15418 735 aa22.35■■□□□ 1.17
VPS51-212ENST00000533656 HSF5Q4G112 596 aaPredicted RBP22.35■■□□□ 1.17
VPS51-212ENST00000533656 TFDP3Q5H9I0 405 aa22.35■■□□□ 1.17
VPS51-212ENST00000533656 PITRM1Q5JRX3 1037 aa22.35■■□□□ 1.17
VPS51-212ENST00000533656 RNF219Q5W0B1 726 aaPredicted RBP22.35■■□□□ 1.17
VPS51-212ENST00000533656 MFSD7Q6UXD7 560 aa22.35■■□□□ 1.17
VPS51-212ENST00000533656 ADIPOR2Q86V24 386 aa22.35■■□□□ 1.17
VPS51-212ENST00000533656 DCAF4L2Q8NA75 395 aa22.35■■□□□ 1.17
VPS51-212ENST00000533656 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.35■■□□□ 1.17
VPS51-212ENST00000533656 TTC17Q96AE7 1141 aa22.35■■□□□ 1.17
VPS51-212ENST00000533656 RNF157Q96PX1 679 aa22.35■■□□□ 1.17
VPS51-212ENST00000533656 FEM1AQ9BSK4 669 aa22.35■■□□□ 1.17
VPS51-212ENST00000533656 IER2Q9BTL4 223 aa22.35■■□□□ 1.17
VPS51-212ENST00000533656 C2orf49Q9BVC5 232 aaPredicted RBP22.35■■□□□ 1.17
VPS51-212ENST00000533656 FBRSL1Q9HCM7 1045 aaKnown RBP22.35■■□□□ 1.17
VPS51-212ENST00000533656 ELOVL2Q9NXB9 296 aa22.35■■□□□ 1.17
VPS51-212ENST00000533656 DNAI1Q9UI46 699 aa22.35■■□□□ 1.17
VPS51-212ENST00000533656 VPS28Q9UK41 221 aa22.35■■□□□ 1.17
VPS51-212ENST00000533656 EFR3BQ9Y2G0 817 aa22.35■■□□□ 1.17
VPS51-212ENST00000533656 JRKLQ9Y4A0 524 aa22.35■■□□□ 1.17
VPS51-212ENST00000533656 RIF1Q5UIP0 2472 aaKnown RBP22.35■■□□□ 1.17
VPS51-212ENST00000533656 ZNF292O60281 2723 aa22.35■■□□□ 1.17
VPS51-212ENST00000533656 USP27XA6NNY8 438 aa22.34■■□□□ 1.17
VPS51-212ENST00000533656 STK25O00506 426 aa22.34■■□□□ 1.17
VPS51-212ENST00000533656 DDX3YO15523 660 aaKnown RBP22.34■■□□□ 1.17
VPS51-212ENST00000533656 EGFP01133 1207 aa22.34■■□□□ 1.17
VPS51-212ENST00000533656 CHRNB1P11230 501 aa22.34■■□□□ 1.17
VPS51-212ENST00000533656 AMPD1P23109 780 aa22.34■■□□□ 1.17
VPS51-212ENST00000533656 PTPN7P35236 360 aa22.34■■□□□ 1.17
VPS51-212ENST00000533656 CDKN2BP42772 138 aa22.34■■□□□ 1.17
VPS51-212ENST00000533656 MRPS21P82921 87 aaKnown RBP22.34■■□□□ 1.17
VPS51-212ENST00000533656 MMRN1Q13201 1228 aa22.34■■□□□ 1.17
VPS51-212ENST00000533656 POLD3Q15054 466 aaPredicted RBP22.34■■□□□ 1.17
VPS51-212ENST00000533656 FUT11Q495W5 492 aa22.34■■□□□ 1.17
VPS51-212ENST00000533656 MBLAC2Q68D91 279 aa22.34■■□□□ 1.17
VPS51-212ENST00000533656 SPOCD1Q6ZMY3 1216 aa22.34■■□□□ 1.17
VPS51-212ENST00000533656 TRMT11Q7Z4G4 463 aaKnown RBP22.34■■□□□ 1.17
VPS51-212ENST00000533656 CCDC50Q8IVM0 306 aa22.34■■□□□ 1.17
VPS51-212ENST00000533656 PCDH19Q8TAB3 1148 aa22.34■■□□□ 1.17
VPS51-212ENST00000533656 ACDQ96AP0 544 aa22.34■■□□□ 1.17
VPS51-212ENST00000533656 RNF25Q96BH1 459 aaPredicted RBP22.34■■□□□ 1.17
VPS51-212ENST00000533656 ALG14Q96F25 216 aa22.34■■□□□ 1.17
VPS51-212ENST00000533656 NDFIP2Q9NV92 336 aa22.34■■□□□ 1.17
VPS51-212ENST00000533656 OR51B4Q9Y5P0 310 aa22.34■■□□□ 1.17
VPS51-212ENST00000533656 PRRT4C9JH25 899 aa22.33■■□□□ 1.17
VPS51-212ENST00000533656 K7EQS6 105 aa22.33■■□□□ 1.17
VPS51-212ENST00000533656 MZF1P28698 734 aaPredicted RBP22.33■■□□□ 1.17
VPS51-212ENST00000533656 RPS9P46781 194 aaKnown RBP22.33■■□□□ 1.17
VPS51-212ENST00000533656 MESP2Q0VG99 397 aa22.33■■□□□ 1.17
VPS51-212ENST00000533656 PAFAH1B3Q15102 231 aaKnown RBP22.33■■□□□ 1.17
VPS51-212ENST00000533656 ZNF569Q5MCW4 686 aa22.33■■□□□ 1.17
VPS51-212ENST00000533656 AFMIDQ63HM1 303 aa22.33■■□□□ 1.17
VPS51-212ENST00000533656 KDM1BQ8NB78 822 aa22.33■■□□□ 1.17
VPS51-212ENST00000533656 ALG3Q92685 438 aa22.33■■□□□ 1.17
VPS51-212ENST00000533656 CLDN23Q96B33 292 aa22.33■■□□□ 1.17
VPS51-212ENST00000533656 FOXQ1Q9C009 403 aa22.33■■□□□ 1.17
VPS51-212ENST00000533656 CIPCQ9C0C6 399 aa22.33■■□□□ 1.17
VPS51-212ENST00000533656 LRRC19Q9H756 370 aa22.33■■□□□ 1.17
VPS51-212ENST00000533656 INTS6Q9UL03 887 aaKnown RBP22.33■■□□□ 1.17
VPS51-212ENST00000533656 HPCAL4Q9UM19 191 aa22.33■■□□□ 1.17
VPS51-212ENST00000533656 PACSIN2Q9UNF0 486 aaPredicted RBP22.33■■□□□ 1.17
VPS51-212ENST00000533656 ZKSCAN5Q9Y2L8 839 aa22.33■■□□□ 1.17
VPS51-212ENST00000533656 SIT1Q9Y3P8 196 aa22.33■■□□□ 1.17
VPS51-212ENST00000533656 RAD54BQ9Y620 910 aa22.33■■□□□ 1.17
VPS51-212ENST00000533656 ZSCAN5CA6NGD5 496 aaPredicted RBP22.32■■□□□ 1.16
VPS51-212ENST00000533656 ARHGAP42A6NI28 874 aa22.32■■□□□ 1.16
VPS51-212ENST00000533656 APOL1O14791 398 aa22.32■■□□□ 1.16
VPS51-212ENST00000533656 GFRA3O60609 400 aa22.32■■□□□ 1.16
VPS51-212ENST00000533656 DLDP09622 509 aaKnown RBP22.32■■□□□ 1.16
VPS51-212ENST00000533656 HNRNPLP14866 589 aaKnown RBP eCLIP22.32■■□□□ 1.16
VPS51-212ENST00000533656 VASPP50552 380 aaPredicted RBP22.32■■□□□ 1.16
VPS51-212ENST00000533656 SLC9A4Q6AI14 798 aa22.32■■□□□ 1.16
VPS51-212ENST00000533656 LRRC49Q8IUZ0 686 aa22.32■■□□□ 1.16
VPS51-212ENST00000533656 CCDC105Q8IYK2 499 aa22.32■■□□□ 1.16
VPS51-212ENST00000533656 OR52K2Q8NGK3 314 aa22.32■■□□□ 1.16
VPS51-212ENST00000533656 EZH1Q92800 747 aaPredicted RBP22.32■■□□□ 1.16
VPS51-212ENST00000533656 ARHGEF2Q92974 986 aaKnown RBP22.32■■□□□ 1.16
VPS51-212ENST00000533656 ACE2Q9BYF1 805 aaPredicted RBP22.32■■□□□ 1.16
VPS51-212ENST00000533656 CARD9Q9H257 536 aa22.32■■□□□ 1.16
VPS51-212ENST00000533656 LMAN1LQ9HAT1 526 aa22.32■■□□□ 1.16
VPS51-212ENST00000533656 ATP13A1Q9HD20 1204 aa22.32■■□□□ 1.16
VPS51-212ENST00000533656 DOCK4Q8N1I0 1966 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms