RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 LTV1Q96GA3 475 aaPredicted RBP5.67□□□□□ -1.5
CD44-236ENST00000533222 ZNF333Q96JL9 665 aa5.67□□□□□ -1.5
CD44-236ENST00000533222 AIFM3Q96NN9 605 aa5.67□□□□□ -1.5
CD44-236ENST00000533222 ACAP3Q96P50 834 aa5.67□□□□□ -1.5
CD44-236ENST00000533222 RANBP9Q96S59 729 aa5.67□□□□□ -1.5
CD44-236ENST00000533222 NELL2Q99435 816 aa5.67□□□□□ -1.5
CD44-236ENST00000533222 C7orf25Q9BPX7 421 aa5.67□□□□□ -1.5
CD44-236ENST00000533222 NEURL2Q9BR09 285 aa5.67□□□□□ -1.5
CD44-236ENST00000533222 LSM14BQ9BX40 385 aaKnown RBP5.67□□□□□ -1.5
CD44-236ENST00000533222 KRTAP4-8Q9BYQ9 185 aa5.67□□□□□ -1.5
CD44-236ENST00000533222 SCAND2PQ9GZW5 306 aaPredicted RBP5.67□□□□□ -1.5
CD44-236ENST00000533222 AZI2Q9H6S1 392 aa5.67□□□□□ -1.5
CD44-236ENST00000533222 SP140LQ9H930 580 aa5.67□□□□□ -1.5
CD44-236ENST00000533222 RASSF1Q9NS23 344 aa5.67□□□□□ -1.5
CD44-236ENST00000533222 UBA2Q9UBT2 640 aaPredicted RBP5.67□□□□□ -1.5
CD44-236ENST00000533222 FBXO10Q9UK96 956 aa5.67□□□□□ -1.5
CD44-236ENST00000533222 MTMR6Q9Y217 621 aa5.67□□□□□ -1.5
CD44-236ENST00000533222 STXBP5LQ9Y2K9 1186 aa5.67□□□□□ -1.5
CD44-236ENST00000533222 MTF2Q9Y483 593 aaPredicted RBP5.67□□□□□ -1.5
CD44-236ENST00000533222 ASB1Q9Y576 335 aa5.67□□□□□ -1.5
CD44-236ENST00000533222 EID1Q9Y6B2 187 aa5.67□□□□□ -1.5
CD44-236ENST00000533222 ABCC3O15438 1527 aa5.67□□□□□ -1.5
CD44-236ENST00000533222 WDR19Q8NEZ3 1342 aa5.67□□□□□ -1.5
CD44-236ENST00000533222 TRPM1Q7Z4N2 1603 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 RIMS2Q9UQ26 1411 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 SIGLEC16A6NMB1 481 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 NDUFS8O00217 210 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 BTN3A1O00481 513 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 TOR1BO14657 336 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 ACSL4O60488 711 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 ALDH1L1O75891 902 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 PRLP01236 227 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 GNAI2P04899 355 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 RARBP10826 455 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 ATP6V1B1P15313 513 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 ZNF28P17035 718 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 CFPP27918 469 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 IDUAP35475 653 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 MSH2P43246 934 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 MAN2A2P49641 1150 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 IST1P53990 364 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 VCPP55072 806 aaKnown RBP5.66□□□□□ -1.5
CD44-236ENST00000533222 SLC6A3Q01959 620 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 CREB5Q02930 508 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 KDSRQ06136 332 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 BAMBIQ13145 260 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 NCF4Q15080 339 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 CYTH1Q15438 398 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 NPTX1Q15818 432 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 GALNTL6Q49A17 601 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 SETMARQ53H47 684 aaPredicted RBP5.66□□□□□ -1.5
CD44-236ENST00000533222 ZNF385BQ569K4 471 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 IGSF11Q5DX21 431 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 FBXO48Q5FWF7 155 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 TTC39AQ5SRH9 613 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 RBM20Q5T481 1227 aaKnown RBP5.66□□□□□ -1.5
CD44-236ENST00000533222 GRTP1Q5TC63 336 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 MZT2AQ6P582 158 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 OLFM4Q6UX06 510 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 CCNI2Q6ZMN8 369 aaPredicted RBP5.66□□□□□ -1.5
CD44-236ENST00000533222 CYP4V2Q6ZWL3 525 aaPredicted RBP5.66□□□□□ -1.5
CD44-236ENST00000533222 ASRGL1Q7L266 308 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 C14orf80Q86SX3 495 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 CROCCP2Q86T23 111 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 COMTD1Q86VU5 262 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 ERO1BQ86YB8 467 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 TICAM1Q8IUC6 712 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 CCDC28AQ8IWP9 274 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 CMIPQ8IY22 773 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 CLYBLQ8N0X4 340 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 CNTROBQ8N137 903 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 TTLL6Q8N841 843 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 CCDC197Q8NCU1 140 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 OR6C4Q8NGE1 309 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 GRPEL2Q8TAA5 225 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 FANK1Q8TC84 345 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 SCFD1Q8WVM8 642 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 INPP5DQ92835 1189 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 E2F7Q96AV8 911 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 CCDC127Q96BQ5 260 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 ZC3H10Q96K80 434 aaKnown RBP5.66□□□□□ -1.5
CD44-236ENST00000533222 CNDP1Q96KN2 507 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 PNKPQ96T60 521 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 SELENOSQ9BQE4 189 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 ZPBPQ9BS86 351 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 TDRD1Q9BXT4 1180 aaKnown RBP5.66□□□□□ -1.5
CD44-236ENST00000533222 KIAA1683Q9H0B3 1180 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 ZCWPW1Q9H0M4 648 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 LHX5Q9H2C1 402 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 SNX25Q9H3E2 840 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 POFUT1Q9H488 388 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 TAF1DQ9H5J8 278 aaPredicted RBP5.66□□□□□ -1.5
CD44-236ENST00000533222 MRM3Q9HC36 420 aaKnown RBP5.66□□□□□ -1.5
CD44-236ENST00000533222 LZTFL1Q9NQ48 299 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 TBC1D23Q9NUY8 699 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 PAG1Q9NWQ8 432 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 HPF1Q9NWY4 346 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 STK32BQ9NY57 414 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 CYP39A1Q9NYL5 469 aa5.66□□□□□ -1.5
CD44-236ENST00000533222 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms