RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 PRPF39Q86UA1 669 aaKnown RBP17.85■□□□□ 0.45
PKP3-208ENST00000531857 FMR1NBQ8N0W7 255 aaPredicted RBP17.85■□□□□ 0.45
PKP3-208ENST00000531857 CCAR2Q8N163 923 aaKnown RBP17.85■□□□□ 0.45
PKP3-208ENST00000531857 OXR1Q8N573 874 aa17.85■□□□□ 0.45
PKP3-208ENST00000531857 SNIP1Q8TAD8 396 aaKnown RBP17.85■□□□□ 0.45
PKP3-208ENST00000531857 BTN2A3PQ96KV6 586 aa17.85■□□□□ 0.45
PKP3-208ENST00000531857 FCRL3Q96P31 734 aaPredicted RBP17.85■□□□□ 0.45
PKP3-208ENST00000531857 GSDMAQ96QA5 445 aa17.85■□□□□ 0.45
PKP3-208ENST00000531857 TPX2Q9ULW0 747 aaKnown RBP17.85■□□□□ 0.45
PKP3-208ENST00000531857 CA5BQ9Y2D0 317 aa17.85■□□□□ 0.45
PKP3-208ENST00000531857 MGAQ8IWI9 3026 aa17.84■□□□□ 0.45
PKP3-208ENST00000531857 CFAP46Q8IYW2 2715 aa17.84■□□□□ 0.45
PKP3-208ENST00000531857 TK2O00142 265 aa17.84■□□□□ 0.45
PKP3-208ENST00000531857 CAPN9O14815 690 aa17.84■□□□□ 0.45
PKP3-208ENST00000531857 PMM2O15305 246 aa17.84■□□□□ 0.45
PKP3-208ENST00000531857 RRP8O43159 456 aaKnown RBP17.84■□□□□ 0.45
PKP3-208ENST00000531857 PLRG1O43660 514 aaKnown RBP17.84■□□□□ 0.45
PKP3-208ENST00000531857 TRUB2O95900 331 aaKnown RBP17.84■□□□□ 0.45
PKP3-208ENST00000531857 IGLV3-25P01717 112 aa17.84■□□□□ 0.45
PKP3-208ENST00000531857 NNMTP40261 264 aa17.84■□□□□ 0.45
PKP3-208ENST00000531857 INSM1Q01101 510 aaPredicted RBP17.84■□□□□ 0.45
PKP3-208ENST00000531857 PROX2Q3B8N5 592 aa17.84■□□□□ 0.45
PKP3-208ENST00000531857 POM121L1PQ3SYA9 428 aa17.84■□□□□ 0.45
PKP3-208ENST00000531857 BEND5Q7L4P6 421 aa17.84■□□□□ 0.45
PKP3-208ENST00000531857 RFFLQ8WZ73 363 aa17.84■□□□□ 0.45
PKP3-208ENST00000531857 KREMEN1Q96MU8 473 aa17.84■□□□□ 0.45
PKP3-208ENST00000531857 SPAG5Q96R06 1193 aa17.84■□□□□ 0.45
PKP3-208ENST00000531857 PRMT1Q99873 361 aaKnown RBP17.84■□□□□ 0.45
PKP3-208ENST00000531857 CAAP1Q9H8G2 361 aa17.84■□□□□ 0.45
PKP3-208ENST00000531857 METTL14Q9HCE5 456 aaKnown RBP17.84■□□□□ 0.45
PKP3-208ENST00000531857 F5H5T6 163 aa17.83■□□□□ 0.44
PKP3-208ENST00000531857 TRIM38O00635 465 aa17.83■□□□□ 0.44
PKP3-208ENST00000531857 SART1O43290 800 aaKnown RBP17.83■□□□□ 0.44
PKP3-208ENST00000531857 SIGLEC6O43699 453 aa17.83■□□□□ 0.44
PKP3-208ENST00000531857 GLDCP23378 1020 aa17.83■□□□□ 0.44
PKP3-208ENST00000531857 ACP1P24666 158 aa17.83■□□□□ 0.44
PKP3-208ENST00000531857 PLK1P53350 603 aa17.83■□□□□ 0.44
PKP3-208ENST00000531857 CNTN1Q12860 1018 aa17.83■□□□□ 0.44
PKP3-208ENST00000531857 EIF4EBP2Q13542 120 aaPredicted RBP17.83■□□□□ 0.44
PKP3-208ENST00000531857 SLC12A1Q13621 1099 aa17.83■□□□□ 0.44
PKP3-208ENST00000531857 TAF5Q15542 800 aa17.83■□□□□ 0.44
PKP3-208ENST00000531857 AGBL4Q5VU57 503 aa17.83■□□□□ 0.44
PKP3-208ENST00000531857 CXorf57Q6NSI4 855 aaKnown RBP17.83■□□□□ 0.44
PKP3-208ENST00000531857 IQCHQ86VS3 1027 aa17.83■□□□□ 0.44
PKP3-208ENST00000531857 SLC25A45Q8N413 288 aa17.83■□□□□ 0.44
PKP3-208ENST00000531857 DCBLD1Q8N8Z6 715 aa17.83■□□□□ 0.44
PKP3-208ENST00000531857 OR52K2Q8NGK3 314 aa17.83■□□□□ 0.44
PKP3-208ENST00000531857 SPATA20Q8TB22 786 aa17.83■□□□□ 0.44
PKP3-208ENST00000531857 BAP1Q92560 729 aa17.83■□□□□ 0.44
PKP3-208ENST00000531857 FGF11Q92914 225 aa17.83■□□□□ 0.44
PKP3-208ENST00000531857 CCDC34Q96HJ3 373 aa17.83■□□□□ 0.44
PKP3-208ENST00000531857 SLC4A5Q9BY07 1137 aa17.83■□□□□ 0.44
PKP3-208ENST00000531857 KDM4CQ9H3R0 1056 aa17.83■□□□□ 0.44
PKP3-208ENST00000531857 TMEM63CQ9P1W3 806 aa17.83■□□□□ 0.44
PKP3-208ENST00000531857 CLCA2Q9UQC9 943 aa17.83■□□□□ 0.44
PKP3-208ENST00000531857 KCNU1A8MYU2 1149 aa17.82■□□□□ 0.44
PKP3-208ENST00000531857 E5RJQ4 531 aa17.82■□□□□ 0.44
PKP3-208ENST00000531857 SLC7A4O43246 635 aa17.82■□□□□ 0.44
PKP3-208ENST00000531857 CD44P16070 742 aaKnown RBP17.82■□□□□ 0.44
PKP3-208ENST00000531857 ACADSBP45954 432 aa17.82■□□□□ 0.44
PKP3-208ENST00000531857 IRAK1P51617 712 aa17.82■□□□□ 0.44
PKP3-208ENST00000531857 YWHAZP63104 245 aaKnown RBP17.82■□□□□ 0.44
PKP3-208ENST00000531857 GCNT1Q02742 428 aa17.82■□□□□ 0.44
PKP3-208ENST00000531857 CENPCQ03188 943 aa17.82■□□□□ 0.44
PKP3-208ENST00000531857 SULT2A1Q06520 285 aa17.82■□□□□ 0.44
PKP3-208ENST00000531857 CCDC173Q0VFZ6 552 aa17.82■□□□□ 0.44
PKP3-208ENST00000531857 STAT4Q14765 748 aa17.82■□□□□ 0.44
PKP3-208ENST00000531857 ACCSLQ4AC99 568 aa17.82■□□□□ 0.44
PKP3-208ENST00000531857 CCDC40Q4G0X9 1142 aa17.82■□□□□ 0.44
PKP3-208ENST00000531857 ISM2Q6H9L7 571 aa17.82■□□□□ 0.44
PKP3-208ENST00000531857 TRIM69Q86WT6 500 aa17.82■□□□□ 0.44
PKP3-208ENST00000531857 ATP6V0D2Q8N8Y2 350 aa17.82■□□□□ 0.44
PKP3-208ENST00000531857 OR8D1Q8WZ84 308 aa17.82■□□□□ 0.44
PKP3-208ENST00000531857 ALG14Q96F25 216 aa17.82■□□□□ 0.44
PKP3-208ENST00000531857 POPDC2Q9HBU9 364 aa17.82■□□□□ 0.44
PKP3-208ENST00000531857 PPM1HQ9ULR3 514 aa17.82■□□□□ 0.44
PKP3-208ENST00000531857 CNTN6Q9UQ52 1028 aa17.82■□□□□ 0.44
PKP3-208ENST00000531857 DMTF1Q9Y222 760 aa17.82■□□□□ 0.44
PKP3-208ENST00000531857 ASH1LQ9NR48 2969 aaKnown RBP17.82■□□□□ 0.44
PKP3-208ENST00000531857 ATMQ13315 3056 aa17.81■□□□□ 0.44
PKP3-208ENST00000531857 FLNBO75369 2602 aaKnown RBP17.81■□□□□ 0.44
PKP3-208ENST00000531857 GADD45BO75293 160 aaPredicted RBP17.81■□□□□ 0.44
PKP3-208ENST00000531857 TAS2R38P59533 333 aa17.81■□□□□ 0.44
PKP3-208ENST00000531857 TLE3Q04726 772 aa17.81■□□□□ 0.44
PKP3-208ENST00000531857 OVGP1Q12889 678 aa17.81■□□□□ 0.44
PKP3-208ENST00000531857 FBXL22Q6P050 247 aa17.81■□□□□ 0.44
PKP3-208ENST00000531857 KDM7AQ6ZMT4 941 aa17.81■□□□□ 0.44
PKP3-208ENST00000531857 DSG4Q86SJ6 1040 aa17.81■□□□□ 0.44
PKP3-208ENST00000531857 TMEM110Q86TL2 294 aa17.81■□□□□ 0.44
PKP3-208ENST00000531857 ERICH1Q86X53 443 aa17.81■□□□□ 0.44
PKP3-208ENST00000531857 CACTIN-AS1Q8N1I8 211 aa17.81■□□□□ 0.44
PKP3-208ENST00000531857 EHBP1Q8NDI1 1231 aa17.81■□□□□ 0.44
PKP3-208ENST00000531857 STK32AQ8WU08 396 aa17.81■□□□□ 0.44
PKP3-208ENST00000531857 CEP63Q96MT8 703 aa17.81■□□□□ 0.44
PKP3-208ENST00000531857 MYOCQ99972 504 aa17.81■□□□□ 0.44
PKP3-208ENST00000531857 TSPY26PQ9H489 355 aa17.81■□□□□ 0.44
PKP3-208ENST00000531857 ACP6Q9NPH0 428 aa17.81■□□□□ 0.44
PKP3-208ENST00000531857 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.81■□□□□ 0.44
PKP3-208ENST00000531857 UCKL1Q9NWZ5 548 aa17.81■□□□□ 0.44
PKP3-208ENST00000531857 TENM4Q6N022 2769 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms