RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 KLRC2P26717 231 aa4.84□□□□□ -1.63
PTPRK-220ENST00000531466 STAT1P42224 750 aa4.84□□□□□ -1.63
PTPRK-220ENST00000531466 PPP3CCP48454 512 aa4.84□□□□□ -1.63
PTPRK-220ENST00000531466 AMTP48728 403 aa4.84□□□□□ -1.63
PTPRK-220ENST00000531466 NUDT6P53370 316 aa4.84□□□□□ -1.63
PTPRK-220ENST00000531466 ACSM2AQ08AH3 577 aa4.84□□□□□ -1.63
PTPRK-220ENST00000531466 ZNF543Q08ER8 600 aa4.84□□□□□ -1.63
PTPRK-220ENST00000531466 GALEQ14376 348 aa4.84□□□□□ -1.63
PTPRK-220ENST00000531466 ZNF284Q2VY69 593 aa4.84□□□□□ -1.63
PTPRK-220ENST00000531466 ODR4Q5SWX8 454 aa4.84□□□□□ -1.63
PTPRK-220ENST00000531466 ERAP2Q6P179 960 aa4.84□□□□□ -1.63
PTPRK-220ENST00000531466 BEND5Q7L4P6 421 aa4.84□□□□□ -1.63
PTPRK-220ENST00000531466 KLBQ86Z14 1044 aa4.84□□□□□ -1.63
PTPRK-220ENST00000531466 TCP11L2Q8N4U5 519 aa4.84□□□□□ -1.63
PTPRK-220ENST00000531466 LILRB1Q8NHL6 650 aaPredicted RBP4.84□□□□□ -1.63
PTPRK-220ENST00000531466 BICD2Q8TD16 824 aa4.84□□□□□ -1.63
PTPRK-220ENST00000531466 KLHL31Q9H511 634 aa4.84□□□□□ -1.63
PTPRK-220ENST00000531466 MYO1AQ9UBC5 1043 aa4.84□□□□□ -1.63
PTPRK-220ENST00000531466 PNMA6EA0A0J9YXQ4 647 aa4.83□□□□□ -1.64
PTPRK-220ENST00000531466 MCIDASD6RGH6 385 aa4.83□□□□□ -1.64
PTPRK-220ENST00000531466 AVPR1AP37288 418 aa4.83□□□□□ -1.64
PTPRK-220ENST00000531466 BNC1Q01954 994 aa4.83□□□□□ -1.64
PTPRK-220ENST00000531466 TLE3Q04726 772 aa4.83□□□□□ -1.64
PTPRK-220ENST00000531466 PPP2R5AQ15172 486 aa4.83□□□□□ -1.64
PTPRK-220ENST00000531466 RASGRP3Q8IV61 690 aa4.83□□□□□ -1.64
PTPRK-220ENST00000531466 TMEM217Q8N7C4 229 aa4.83□□□□□ -1.64
PTPRK-220ENST00000531466 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.83□□□□□ -1.64
PTPRK-220ENST00000531466 KPNA5O15131 536 aa4.82□□□□□ -1.64
PTPRK-220ENST00000531466 TSHRP16473 764 aa4.82□□□□□ -1.64
PTPRK-220ENST00000531466 THPOP40225 353 aa4.82□□□□□ -1.64
PTPRK-220ENST00000531466 PIK3CBP42338 1070 aa4.82□□□□□ -1.64
PTPRK-220ENST00000531466 ADPRHP54922 357 aa4.82□□□□□ -1.64
PTPRK-220ENST00000531466 GBX1Q14549 363 aa4.82□□□□□ -1.64
PTPRK-220ENST00000531466 RETSATQ6NUM9 610 aa4.82□□□□□ -1.64
PTPRK-220ENST00000531466 TMEM88Q6PEY1 159 aa4.82□□□□□ -1.64
PTPRK-220ENST00000531466 HORMAD2Q8N7B1 307 aa4.82□□□□□ -1.64
PTPRK-220ENST00000531466 RNF152Q8N8N0 203 aa4.82□□□□□ -1.64
PTPRK-220ENST00000531466 SORBS1Q9BX66 1292 aaKnown RBP4.82□□□□□ -1.64
PTPRK-220ENST00000531466 FRMD8Q9BZ67 464 aaPredicted RBP4.82□□□□□ -1.64
PTPRK-220ENST00000531466 ACTR5Q9H9F9 607 aaPredicted RBP4.82□□□□□ -1.64
PTPRK-220ENST00000531466 RAP2CQ9Y3L5 183 aa4.82□□□□□ -1.64
PTPRK-220ENST00000531466 LOC105369274A0A096LPK9 316 aa4.81□□□□□ -1.64
PTPRK-220ENST00000531466 LOC102723532A0A0G2JNH3 316 aa4.81□□□□□ -1.64
PTPRK-220ENST00000531466 ANKRD62A6NC57 917 aa4.81□□□□□ -1.64
PTPRK-220ENST00000531466 C3orf70A6NLC5 250 aaPredicted RBP4.81□□□□□ -1.64
PTPRK-220ENST00000531466 ERI2A8K979 691 aaKnown RBP4.81□□□□□ -1.64
PTPRK-220ENST00000531466 CER1O95813 267 aa4.81□□□□□ -1.64
PTPRK-220ENST00000531466 GNLYP22749 145 aa4.81□□□□□ -1.64
PTPRK-220ENST00000531466 TAF6P49848 677 aa4.81□□□□□ -1.64
PTPRK-220ENST00000531466 FOXL2P58012 376 aa4.81□□□□□ -1.64
PTPRK-220ENST00000531466 RPL15P61313 204 aaKnown RBP4.81□□□□□ -1.64
PTPRK-220ENST00000531466 NFE2Q16621 373 aaPredicted RBP4.81□□□□□ -1.64
PTPRK-220ENST00000531466 MAPKAPK3Q16644 382 aa4.81□□□□□ -1.64
PTPRK-220ENST00000531466 ADAM5Q6NVV9 412 aa4.81□□□□□ -1.64
PTPRK-220ENST00000531466 ZNF771Q7L3S4 317 aaPredicted RBP4.81□□□□□ -1.64
PTPRK-220ENST00000531466 OR4N4Q8N0Y3 316 aa4.81□□□□□ -1.64
PTPRK-220ENST00000531466 MIGA1Q8NAN2 632 aa4.81□□□□□ -1.64
PTPRK-220ENST00000531466 GLIS1Q8NBF1 620 aa4.81□□□□□ -1.64
PTPRK-220ENST00000531466 NEXN-AS1Q8NBZ9 246 aa4.81□□□□□ -1.64
PTPRK-220ENST00000531466 TAF15Q92804 592 aaKnown RBP eCLIP4.81□□□□□ -1.64
PTPRK-220ENST00000531466 EPYCQ99645 322 aa4.81□□□□□ -1.64
PTPRK-220ENST00000531466 RGL1Q9NZL6 768 aa4.81□□□□□ -1.64
PTPRK-220ENST00000531466 IL36RNQ9UBH0 155 aa4.81□□□□□ -1.64
PTPRK-220ENST00000531466 RAB21Q9UL25 225 aa4.81□□□□□ -1.64
PTPRK-220ENST00000531466 MAN2B2Q9Y2E5 1009 aa4.81□□□□□ -1.64
PTPRK-220ENST00000531466 IGLV5-52A0A0A0MRZ9 124 aa4.8□□□□□ -1.64
PTPRK-220ENST00000531466 A0A1W2PPC4 97 aa4.8□□□□□ -1.64
PTPRK-220ENST00000531466 LMX1BO60663 402 aa4.8□□□□□ -1.64
PTPRK-220ENST00000531466 NAGAP17050 411 aa4.8□□□□□ -1.64
PTPRK-220ENST00000531466 ZBTB16Q05516 673 aa4.8□□□□□ -1.64
PTPRK-220ENST00000531466 ILF3Q12906 894 aaKnown RBP eCLIP4.8□□□□□ -1.64
PTPRK-220ENST00000531466 STPG1Q5TH74 334 aa4.8□□□□□ -1.64
PTPRK-220ENST00000531466 HEPHL1Q6MZM0 1159 aa4.8□□□□□ -1.64
PTPRK-220ENST00000531466 SPATA20Q8TB22 786 aa4.8□□□□□ -1.64
PTPRK-220ENST00000531466 SLC12A4Q9UP95 1085 aa4.8□□□□□ -1.64
PTPRK-220ENST00000531466 RAI2Q9Y5P3 530 aa4.8□□□□□ -1.64
PTPRK-220ENST00000531466 MMP24Q9Y5R2 645 aa4.8□□□□□ -1.64
PTPRK-220ENST00000531466 TCRBV7S3A2A0A539 114 aa4.79□□□□□ -1.64
PTPRK-220ENST00000531466 PQBP1O60828 265 aaKnown RBP4.79□□□□□ -1.64
PTPRK-220ENST00000531466 SOX30O94993 753 aa4.79□□□□□ -1.64
PTPRK-220ENST00000531466 PAK4O96013 591 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-220ENST00000531466 GRK5P34947 590 aa4.79□□□□□ -1.64
PTPRK-220ENST00000531466 IGBP1P78318 339 aa4.79□□□□□ -1.64
PTPRK-220ENST00000531466 RHAGQ02094 409 aa4.79□□□□□ -1.64
PTPRK-220ENST00000531466 CYB5RLQ6IPT4 315 aa4.79□□□□□ -1.64
PTPRK-220ENST00000531466 DCUN1D3Q8IWE4 304 aa4.79□□□□□ -1.64
PTPRK-220ENST00000531466 CEP76Q8TAP6 659 aa4.79□□□□□ -1.64
PTPRK-220ENST00000531466 ADGRG7Q96K78 797 aa4.79□□□□□ -1.64
PTPRK-220ENST00000531466 EPS8L2Q9H6S3 715 aa4.79□□□□□ -1.64
PTPRK-220ENST00000531466 TRPC5Q9UL62 973 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-220ENST00000531466 SHROOM4Q9ULL8 1493 aa4.79□□□□□ -1.64
PTPRK-220ENST00000531466 FAM234BA2RU67 622 aa4.78□□□□□ -1.64
PTPRK-220ENST00000531466 ANTXRLA6NF34 631 aa4.78□□□□□ -1.64
PTPRK-220ENST00000531466 SERPINI2O75830 405 aa4.78□□□□□ -1.64
PTPRK-220ENST00000531466 DAOP14920 347 aa4.78□□□□□ -1.64
PTPRK-220ENST00000531466 GRM4Q14833 912 aa4.78□□□□□ -1.64
PTPRK-220ENST00000531466 PALB2Q86YC2 1186 aa4.78□□□□□ -1.64
PTPRK-220ENST00000531466 POC1AQ8NBT0 407 aa4.78□□□□□ -1.64
PTPRK-220ENST00000531466 FAM110DQ8TAY7 271 aaPredicted RBP4.78□□□□□ -1.64
PTPRK-220ENST00000531466 GDF15Q99988 308 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms