RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 LARS2Q15031 903 aaKnown RBP7.93□□□□□ -1.14
CSDE1-213ENST00000530784 RABL6Q3YEC7 729 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-213ENST00000530784 C4orf46Q504U0 113 aa7.93□□□□□ -1.14
CSDE1-213ENST00000530784 MIS18BP1Q6P0N0 1132 aa7.93□□□□□ -1.14
CSDE1-213ENST00000530784 SLC2A7Q6PXP3 512 aa7.93□□□□□ -1.14
CSDE1-213ENST00000530784 DCDC5Q6ZRR9 648 aa7.93□□□□□ -1.14
CSDE1-213ENST00000530784 C12orf76Q8N812 135 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-213ENST00000530784 PNPLA1Q8N8W4 532 aa7.93□□□□□ -1.14
CSDE1-213ENST00000530784 CD99L2Q8TCZ2 262 aa7.93□□□□□ -1.14
CSDE1-213ENST00000530784 TBC1D22AQ8WUA7 517 aa7.93□□□□□ -1.14
CSDE1-213ENST00000530784 TEKT1Q969V4 418 aa7.93□□□□□ -1.14
CSDE1-213ENST00000530784 HS6ST2Q96MM7 605 aa7.93□□□□□ -1.14
CSDE1-213ENST00000530784 COLEC11Q9BWP8 271 aa7.93□□□□□ -1.14
CSDE1-213ENST00000530784 TMEM39BQ9GZU3 492 aa7.93□□□□□ -1.14
CSDE1-213ENST00000530784 TMOD2Q9NZR1 351 aa7.93□□□□□ -1.14
CSDE1-213ENST00000530784 RIPOR2Q9Y4F9 1068 aa7.93□□□□□ -1.14
CSDE1-213ENST00000530784 PTPRCP08575 1304 aa7.93□□□□□ -1.14
CSDE1-213ENST00000530784 CACNA1FO60840 1977 aa7.92□□□□□ -1.14
CSDE1-213ENST00000530784 CCL15-CCL14A0A0B4J2E2 113 aa7.92□□□□□ -1.14
CSDE1-213ENST00000530784 H3BNC9 293 aa7.92□□□□□ -1.14
CSDE1-213ENST00000530784 APOL1O14791 398 aa7.92□□□□□ -1.14
CSDE1-213ENST00000530784 WDHD1O75717 1129 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-213ENST00000530784 ARP10275 920 aa7.92□□□□□ -1.14
CSDE1-213ENST00000530784 MTAPQ13126 283 aa7.92□□□□□ -1.14
CSDE1-213ENST00000530784 CCL15Q16663 113 aa7.92□□□□□ -1.14
CSDE1-213ENST00000530784 LRRC24Q50LG9 513 aa7.92□□□□□ -1.14
CSDE1-213ENST00000530784 GRHL2Q6ISB3 625 aa7.92□□□□□ -1.14
CSDE1-213ENST00000530784 BEND5Q7L4P6 421 aa7.92□□□□□ -1.14
CSDE1-213ENST00000530784 C1QL2Q7Z5L3 287 aa7.92□□□□□ -1.14
CSDE1-213ENST00000530784 CNGA4Q8IV77 575 aa7.92□□□□□ -1.14
CSDE1-213ENST00000530784 ANKRD44Q8N8A2 993 aa7.92□□□□□ -1.14
CSDE1-213ENST00000530784 SUN3Q8TAQ9 357 aa7.92□□□□□ -1.14
CSDE1-213ENST00000530784 C1QTNF7Q9BXJ2 289 aa7.92□□□□□ -1.14
CSDE1-213ENST00000530784 MAGEB5Q9BZ81 275 aa7.92□□□□□ -1.14
CSDE1-213ENST00000530784 USP29Q9HBJ7 922 aa7.92□□□□□ -1.14
CSDE1-213ENST00000530784 ZBTB26Q9HCK0 441 aa7.92□□□□□ -1.14
CSDE1-213ENST00000530784 GAR1Q9NY12 217 aaKnown RBP7.92□□□□□ -1.14
CSDE1-213ENST00000530784 KLHL13Q9P2N7 655 aa7.92□□□□□ -1.14
CSDE1-213ENST00000530784 BTBD3Q9Y2F9 522 aa7.92□□□□□ -1.14
CSDE1-213ENST00000530784 OTOFQ9HC10 1997 aa7.91□□□□□ -1.14
CSDE1-213ENST00000530784 KCNU1A8MYU2 1149 aa7.91□□□□□ -1.14
CSDE1-213ENST00000530784 CAND2O75155 1236 aa7.91□□□□□ -1.14
CSDE1-213ENST00000530784 WDR47O94967 919 aa7.91□□□□□ -1.14
CSDE1-213ENST00000530784 IFIT1P09914 478 aaKnown RBP7.91□□□□□ -1.14
CSDE1-213ENST00000530784 GPC5P78333 572 aa7.91□□□□□ -1.14
CSDE1-213ENST00000530784 DAZAP2Q15038 168 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-213ENST00000530784 ARHGEF6Q15052 776 aa7.91□□□□□ -1.14
CSDE1-213ENST00000530784 PUM3Q15397 648 aaKnown RBP7.91□□□□□ -1.14
CSDE1-213ENST00000530784 ZNF813Q6ZN06 617 aa7.91□□□□□ -1.14
CSDE1-213ENST00000530784 ZNF398Q8TD17 642 aa7.91□□□□□ -1.14
CSDE1-213ENST00000530784 BRI3BPQ8WY22 251 aa7.91□□□□□ -1.14
CSDE1-213ENST00000530784 PRR11Q96HE9 360 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-213ENST00000530784 PRSS22Q9GZN4 317 aa7.91□□□□□ -1.14
CSDE1-213ENST00000530784 STARD7Q9NQZ5 370 aa7.91□□□□□ -1.14
CSDE1-213ENST00000530784 ZNF521Q96K83 1311 aa7.91□□□□□ -1.14
CSDE1-213ENST00000530784 KIF16BQ96L93 1317 aa7.91□□□□□ -1.14
CSDE1-213ENST00000530784 RPAP1Q9BWH6 1393 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-213ENST00000530784 CLIC1O00299 241 aa7.9□□□□□ -1.14
CSDE1-213ENST00000530784 PRC1O43663 620 aa7.9□□□□□ -1.14
CSDE1-213ENST00000530784 PRAMEF2O60811 474 aa7.9□□□□□ -1.14
CSDE1-213ENST00000530784 COQ9O75208 318 aa7.9□□□□□ -1.14
CSDE1-213ENST00000530784 MYL4P12829 197 aa7.9□□□□□ -1.14
CSDE1-213ENST00000530784 GPS1Q13098 491 aa7.9□□□□□ -1.14
CSDE1-213ENST00000530784 KCNB1Q14721 858 aa7.9□□□□□ -1.14
CSDE1-213ENST00000530784 MFSD13AQ14CX5 517 aa7.9□□□□□ -1.14
CSDE1-213ENST00000530784 ACOX1Q15067 660 aa7.9□□□□□ -1.14
CSDE1-213ENST00000530784 TMEM63BQ5T3F8 832 aa7.9□□□□□ -1.14
CSDE1-213ENST00000530784 FAXCQ5TGI0 409 aa7.9□□□□□ -1.14
CSDE1-213ENST00000530784 MORN5Q5VZ52 161 aa7.9□□□□□ -1.14
CSDE1-213ENST00000530784 ABLIM2Q6H8Q1 611 aa7.9□□□□□ -1.14
CSDE1-213ENST00000530784 KRTAP5-3Q6L8H2 238 aa7.9□□□□□ -1.14
CSDE1-213ENST00000530784 HIBCHQ6NVY1 386 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-213ENST00000530784 KIAA0408Q6ZU52 694 aa7.9□□□□□ -1.14
CSDE1-213ENST00000530784 ERO1BQ86YB8 467 aa7.9□□□□□ -1.14
CSDE1-213ENST00000530784 P3H2Q8IVL5 708 aa7.9□□□□□ -1.14
CSDE1-213ENST00000530784 FAM71DQ8N9W8 422 aa7.9□□□□□ -1.14
CSDE1-213ENST00000530784 CCDC150Q8NCX0 1101 aa7.9□□□□□ -1.14
CSDE1-213ENST00000530784 SMG7Q92540 1137 aaKnown RBP7.9□□□□□ -1.14
CSDE1-213ENST00000530784 GCC1Q96CN9 775 aa7.9□□□□□ -1.14
CSDE1-213ENST00000530784 ZC3H10Q96K80 434 aaKnown RBP7.9□□□□□ -1.14
CSDE1-213ENST00000530784 CYP2D7A0A087X1C5 515 aa7.89□□□□□ -1.15
CSDE1-213ENST00000530784 ANO9A1A5B4 782 aa7.89□□□□□ -1.15
CSDE1-213ENST00000530784 NCK2O43639 380 aa7.89□□□□□ -1.15
CSDE1-213ENST00000530784 CETPP11597 493 aa7.89□□□□□ -1.15
CSDE1-213ENST00000530784 PBX1P40424 430 aa7.89□□□□□ -1.15
CSDE1-213ENST00000530784 TXNL4AP83876 142 aaKnown RBP7.89□□□□□ -1.15
CSDE1-213ENST00000530784 KLF9Q13886 244 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-213ENST00000530784 ZNF268Q14587 947 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-213ENST00000530784 SEC23BQ15437 767 aa7.89□□□□□ -1.15
CSDE1-213ENST00000530784 SLC9C1Q4G0N8 1177 aa7.89□□□□□ -1.15
CSDE1-213ENST00000530784 FKBP1CQ5VVH2 108 aa7.89□□□□□ -1.15
CSDE1-213ENST00000530784 ZNF425Q6IV72 752 aa7.89□□□□□ -1.15
CSDE1-213ENST00000530784 APOBEC3HQ6NTF7 200 aaKnown RBP7.89□□□□□ -1.15
CSDE1-213ENST00000530784 RANBP10Q6VN20 620 aa7.89□□□□□ -1.15
CSDE1-213ENST00000530784 USP44Q9H0E7 712 aa7.89□□□□□ -1.15
CSDE1-213ENST00000530784 SAP30LQ9HAJ7 183 aa7.89□□□□□ -1.15
CSDE1-213ENST00000530784 ZCCHC17Q9NP64 241 aaKnown RBP7.89□□□□□ -1.15
CSDE1-213ENST00000530784 VPS45Q9NRW7 570 aa7.89□□□□□ -1.15
CSDE1-213ENST00000530784 TMOD4Q9NZQ9 345 aa7.89□□□□□ -1.15
CSDE1-213ENST00000530784 FZD4Q9ULV1 537 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms