RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 POF1BQ8WVV4 589 aa3.29□□□□□ -1.88
NUP98-218ENST00000530516 TMEM120AQ9BXJ8 343 aa3.29□□□□□ -1.88
NUP98-218ENST00000530516 HDHD5Q9BXW7 423 aa3.29□□□□□ -1.88
NUP98-218ENST00000530516 GRHPRQ9UBQ7 328 aa3.29□□□□□ -1.88
NUP98-218ENST00000530516 HERC5Q9UII4 1024 aaKnown RBP3.29□□□□□ -1.88
NUP98-218ENST00000530516 ANAPC4Q9UJX5 808 aa3.29□□□□□ -1.88
NUP98-218ENST00000530516 TRBV5-7A0A0A0MS05 114 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 TCRBV7S3A2A0A539 114 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 FAM90A20PA6NIJ5 464 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 NPIPB13A6NJU9 1138 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 NPIPB5A8MRT5 1133 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 NPIPB4C9JG80 1138 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 H0YGN5 161 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 ACOT8O14734 319 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 TNFRSF13BO14836 293 aaPredicted RBP3.28□□□□□ -1.88
NUP98-218ENST00000530516 SLC28A2O43868 658 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 ZC3H11AO75152 810 aaKnown RBP eCLIP3.28□□□□□ -1.88
NUP98-218ENST00000530516 CSTBP04080 98 aaKnown RBP3.28□□□□□ -1.88
NUP98-218ENST00000530516 LYL1P12980 280 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 ICA1Q05084 483 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 PMPCAQ10713 525 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 PKP1Q13835 747 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 DCTN1Q14203 1278 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 GALNT3Q14435 633 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 LRRC24Q50LG9 513 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 C9orf50Q5SZB4 431 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 ATPAF1Q5TC12 328 aaPredicted RBP3.28□□□□□ -1.88
NUP98-218ENST00000530516 ERAP2Q6P179 960 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 C1orf228Q6PIY5 440 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 SLC30A9Q6PML9 568 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 RAB11FIP2Q7L804 512 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 RASGRP2Q7LDG7 609 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 TRAPPC11Q7Z392 1133 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 TMEM200AQ86VY9 491 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 KLBQ86Z14 1044 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 ENDOVQ8N8Q3 282 aaKnown RBP3.28□□□□□ -1.88
NUP98-218ENST00000530516 VPS37AQ8NEZ2 397 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 OTUD7AQ8TE49 926 aaPredicted RBP3.28□□□□□ -1.88
NUP98-218ENST00000530516 ZNF419Q96HQ0 510 aaPredicted RBP3.28□□□□□ -1.88
NUP98-218ENST00000530516 DDX23Q9BUQ8 820 aaKnown RBP3.28□□□□□ -1.88
NUP98-218ENST00000530516 ELAC1Q9H777 363 aaKnown RBP3.28□□□□□ -1.88
NUP98-218ENST00000530516 Q9N2J8 555 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 SIRT3Q9NTG7 399 aaPredicted RBP3.28□□□□□ -1.88
NUP98-218ENST00000530516 TMEM248Q9NWD8 314 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 ARL15Q9NXU5 204 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 DACT1Q9NYF0 836 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 LRFN1Q9P244 771 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 KCND3Q9UK17 655 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 C19orf53Q9UNZ5 99 aaPredicted RBP3.28□□□□□ -1.88
NUP98-218ENST00000530516 TNFSF13BQ9Y275 285 aa3.28□□□□□ -1.88
NUP98-218ENST00000530516 EFCAB8A8MWE9 144 aa3.27□□□□□ -1.89
NUP98-218ENST00000530516 F5H423 210 aaPredicted RBP3.27□□□□□ -1.89
NUP98-218ENST00000530516 NGFRP08138 427 aa3.27□□□□□ -1.89
NUP98-218ENST00000530516 TYK2P29597 1187 aa3.27□□□□□ -1.89
NUP98-218ENST00000530516 SERPINA4P29622 427 aa3.27□□□□□ -1.89
NUP98-218ENST00000530516 HOXA11P31270 313 aaPredicted RBP3.27□□□□□ -1.89
NUP98-218ENST00000530516 RFX5P48382 616 aaPredicted RBP3.27□□□□□ -1.89
NUP98-218ENST00000530516 POLE2P56282 527 aa3.27□□□□□ -1.89
NUP98-218ENST00000530516 CDK18Q07002 472 aa3.27□□□□□ -1.89
NUP98-218ENST00000530516 FOXO1Q12778 655 aa3.27□□□□□ -1.89
NUP98-218ENST00000530516 HDAC1Q13547 482 aaPredicted RBP3.27□□□□□ -1.89
NUP98-218ENST00000530516 TBRG1Q3YBR2 411 aa3.27□□□□□ -1.89
NUP98-218ENST00000530516 ZNF585BQ52M93 769 aa3.27□□□□□ -1.89
NUP98-218ENST00000530516 DGAT2L7PQ6IED9 249 aa3.27□□□□□ -1.89
NUP98-218ENST00000530516 CAPRIN2Q6IMN6 1127 aaKnown RBP3.27□□□□□ -1.89
NUP98-218ENST00000530516 JMJD6Q6NYC1 403 aaPredicted RBP3.27□□□□□ -1.89
NUP98-218ENST00000530516 MTFR2Q6P444 385 aa3.27□□□□□ -1.89
NUP98-218ENST00000530516 KLHL17Q6TDP4 642 aa3.27□□□□□ -1.89
NUP98-218ENST00000530516 USP43Q70EL4 1123 aa3.27□□□□□ -1.89
NUP98-218ENST00000530516 RRAGAQ7L523 313 aa3.27□□□□□ -1.89
NUP98-218ENST00000530516 RNF144BQ7Z419 303 aa3.27□□□□□ -1.89
NUP98-218ENST00000530516 ANKS1BQ7Z6G8 1248 aa3.27□□□□□ -1.89
NUP98-218ENST00000530516 CTU1Q7Z7A3 348 aaKnown RBP3.27□□□□□ -1.89
NUP98-218ENST00000530516 FOXP4Q8IVH2 680 aaPredicted RBP3.27□□□□□ -1.89
NUP98-218ENST00000530516 SLC25A41Q8N5S1 370 aa3.27□□□□□ -1.89
NUP98-218ENST00000530516 KDM1BQ8NB78 822 aa3.27□□□□□ -1.89
NUP98-218ENST00000530516 ENGASEQ8NFI3 743 aa3.27□□□□□ -1.89
NUP98-218ENST00000530516 C2CD4CQ8TF44 421 aa3.27□□□□□ -1.89
NUP98-218ENST00000530516 CENPIQ92674 756 aaPredicted RBP3.27□□□□□ -1.89
NUP98-218ENST00000530516 URB1-AS1Q96HZ7 61 aa3.27□□□□□ -1.89
NUP98-218ENST00000530516 PPP1R10Q96QC0 940 aaKnown RBP3.27□□□□□ -1.89
NUP98-218ENST00000530516 NTPCRQ9BSD7 190 aaKnown RBP3.27□□□□□ -1.89
NUP98-218ENST00000530516 HERC2P3Q9BVR0 1158 aa3.27□□□□□ -1.89
NUP98-218ENST00000530516 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.27□□□□□ -1.89
NUP98-218ENST00000530516 BRD8Q9H0E9 1235 aa3.27□□□□□ -1.89
NUP98-218ENST00000530516 PDE11AQ9HCR9 933 aa3.27□□□□□ -1.89
NUP98-218ENST00000530516 PNRC2Q9NPJ4 139 aaKnown RBP3.27□□□□□ -1.89
NUP98-218ENST00000530516 C17orf100A8MU93 164 aa3.26□□□□□ -1.89
NUP98-218ENST00000530516 H0Y3Z8 333 aa3.26□□□□□ -1.89
NUP98-218ENST00000530516 IPO5O00410 1097 aaKnown RBP3.26□□□□□ -1.89
NUP98-218ENST00000530516 LCKP06239 509 aa3.26□□□□□ -1.89
NUP98-218ENST00000530516 ACP5P13686 325 aa3.26□□□□□ -1.89
NUP98-218ENST00000530516 PLA2G2AP14555 144 aa3.26□□□□□ -1.89
NUP98-218ENST00000530516 PKMP14618 531 aaKnown RBP3.26□□□□□ -1.89
NUP98-218ENST00000530516 AVPR2P30518 371 aa3.26□□□□□ -1.89
NUP98-218ENST00000530516 TNFSF8P32971 234 aa3.26□□□□□ -1.89
NUP98-218ENST00000530516 PRKAA2P54646 552 aa3.26□□□□□ -1.89
NUP98-218ENST00000530516 SELENOVP59797 346 aa3.26□□□□□ -1.89
NUP98-218ENST00000530516 TRAF1Q13077 416 aa3.26□□□□□ -1.89
NUP98-218ENST00000530516 BLMHQ13867 455 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms