RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 SPATA13Q96N96 652 aa8.42□□□□□ -1.06
CMTM1-214ENST00000530141 ZNF558Q96NG5 402 aa8.42□□□□□ -1.06
CMTM1-214ENST00000530141 PRRX2Q99811 253 aa8.42□□□□□ -1.06
CMTM1-214ENST00000530141 HERC2P3Q9BVR0 1158 aa8.42□□□□□ -1.06
CMTM1-214ENST00000530141 GPR62Q9BZJ7 368 aa8.42□□□□□ -1.06
CMTM1-214ENST00000530141 RAB6CQ9H0N0 254 aa8.42□□□□□ -1.06
CMTM1-214ENST00000530141 RETREG1Q9H6L5 497 aa8.42□□□□□ -1.06
CMTM1-214ENST00000530141 VPS37BQ9H9H4 285 aa8.42□□□□□ -1.06
CMTM1-214ENST00000530141 RC3H2Q9HBD1 1191 aaKnown RBP8.42□□□□□ -1.06
CMTM1-214ENST00000530141 RAB6BQ9NRW1 208 aa8.42□□□□□ -1.06
CMTM1-214ENST00000530141 DTLQ9NZJ0 730 aa8.42□□□□□ -1.06
CMTM1-214ENST00000530141 SENP1Q9P0U3 644 aa8.42□□□□□ -1.06
CMTM1-214ENST00000530141 MTRRQ9UBK8 725 aa8.42□□□□□ -1.06
CMTM1-214ENST00000530141 LGALS13Q9UHV8 139 aa8.42□□□□□ -1.06
CMTM1-214ENST00000530141 TLR6Q9Y2C9 796 aa8.42□□□□□ -1.06
CMTM1-214ENST00000530141 CLUHO75153 1309 aa8.42□□□□□ -1.06
CMTM1-214ENST00000530141 CACNA1GO43497 2377 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 EXOC1LA0A1B0GW35 172 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 A0A1W2PQH9 124 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 FAM92AA1XBS5 289 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 ERI2A8K979 691 aaKnown RBP8.41□□□□□ -1.06
CMTM1-214ENST00000530141 C5orf67F2Z3F1 127 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 MFSD11O43934 449 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 SHOX2O60902 331 aaPredicted RBP8.41□□□□□ -1.06
CMTM1-214ENST00000530141 SHBGP04278 402 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 ASGR2P07307 311 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 OR4Q2P0C623 313 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 ERCC2P18074 760 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 EPHB2P29323 1055 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 HOXC13P31276 330 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 PPM1AP35813 382 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 PPP3CCP48454 512 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 MAGOHP61326 146 aaKnown RBP8.41□□□□□ -1.06
CMTM1-214ENST00000530141 GNGT1P63211 74 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 GBE1Q04446 702 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 AP1B1Q10567 949 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 IFRD2Q12894 506 aaPredicted RBP8.41□□□□□ -1.06
CMTM1-214ENST00000530141 SEMA5AQ13591 1074 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 BTG3Q14201 252 aaPredicted RBP8.41□□□□□ -1.06
CMTM1-214ENST00000530141 PRPSAP1Q14558 356 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 KCNJ11Q14654 390 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 PSMD5Q16401 504 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 KYNUQ16719 465 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 PARP6Q2NL67 630 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 MGAT5BQ3V5L5 792 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 PLA2G2CQ5R387 149 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 TPGS2Q68CL5 300 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 KCTD16Q68DU8 428 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 TIGD7Q6NT04 549 aaPredicted RBP8.41□□□□□ -1.06
CMTM1-214ENST00000530141 LRRC31Q6UY01 552 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 LIAT1Q6ZQX7 453 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 ZBED8Q8IZ13 594 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 ZNF276Q8N554 614 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 GLIS1Q8NBF1 620 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 CCNYQ8ND76 341 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 SCAMP5Q8TAC9 235 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 POF1BQ8WVV4 589 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 CENPTQ96BT3 561 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 HDAC11Q96DB2 347 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 TMEM169Q96HH4 297 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 IGSF21Q96ID5 467 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 C9orf72Q96LT7 481 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 RIPOR3Q96MK2 946 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 SEPT5Q99719 369 aaPredicted RBP8.41□□□□□ -1.06
CMTM1-214ENST00000530141 USB1Q9BQ65 265 aaKnown RBP8.41□□□□□ -1.06
CMTM1-214ENST00000530141 PHF7Q9BWX1 381 aaPredicted RBP8.41□□□□□ -1.06
CMTM1-214ENST00000530141 RHOBTB2Q9BYZ6 727 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 PRDM9Q9NQV7 894 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.41□□□□□ -1.06
CMTM1-214ENST00000530141 TMEM30AQ9NV96 361 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 HAUS2Q9NVX0 235 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.41□□□□□ -1.06
CMTM1-214ENST00000530141 IGSF9Q9P2J2 1179 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 OR12D3Q9UGF7 316 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 AFF4Q9UHB7 1163 aaKnown RBP8.41□□□□□ -1.06
CMTM1-214ENST00000530141 TTC3P53804 2025 aa8.41□□□□□ -1.06
CMTM1-214ENST00000530141 KMT2BQ9UMN6 2715 aaPredicted RBP8.4□□□□□ -1.06
CMTM1-214ENST00000530141 WASH4PA8MWX3 477 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 F8W810 466 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 TRDMT1O14717 391 aaKnown RBP8.4□□□□□ -1.06
CMTM1-214ENST00000530141 CPP00450 1065 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 SOD2P04179 222 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 URODP06132 367 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 CSH1P0DML2 217 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 CSH2P0DML3 217 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 GBP2P32456 591 aaPredicted RBP8.4□□□□□ -1.06
CMTM1-214ENST00000530141 HPDP32754 393 aaPredicted RBP8.4□□□□□ -1.06
CMTM1-214ENST00000530141 MDH1P40925 334 aaKnown RBP8.4□□□□□ -1.06
CMTM1-214ENST00000530141 MMP13P45452 471 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 ARPP19P56211 112 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 TBX4P57082 545 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 GEMIN4P57678 1058 aaKnown RBP8.4□□□□□ -1.06
CMTM1-214ENST00000530141 PITX1P78337 314 aaPredicted RBP8.4□□□□□ -1.06
CMTM1-214ENST00000530141 RING1Q06587 406 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 PPIDQ08752 370 aaKnown RBP8.4□□□□□ -1.06
CMTM1-214ENST00000530141 GALNT2Q10471 571 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 PLD1Q13393 1074 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 EIF4EBP2Q13542 120 aaPredicted RBP8.4□□□□□ -1.06
CMTM1-214ENST00000530141 AUHQ13825 339 aaKnown RBP8.4□□□□□ -1.06
CMTM1-214ENST00000530141 VEPH1Q14D04 833 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms