RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 PLD2O14939 933 aa12□□□□□ -0.49
AMBRA1-207ENST00000529553 ALOX15BO15296 676 aa12□□□□□ -0.49
AMBRA1-207ENST00000529553 NVLO15381 856 aaKnown RBP12□□□□□ -0.49
AMBRA1-207ENST00000529553 CSF2P04141 144 aa12□□□□□ -0.49
AMBRA1-207ENST00000529553 CD58P19256 250 aa12□□□□□ -0.49
AMBRA1-207ENST00000529553 SLC5A2P31639 672 aa12□□□□□ -0.49
AMBRA1-207ENST00000529553 RPIAP49247 311 aa12□□□□□ -0.49
AMBRA1-207ENST00000529553 DLG4P78352 724 aa12□□□□□ -0.49
AMBRA1-207ENST00000529553 CDH18Q13634 790 aa12□□□□□ -0.49
AMBRA1-207ENST00000529553 CDKN3Q16667 212 aa12□□□□□ -0.49
AMBRA1-207ENST00000529553 FSCBQ5H9T9 825 aa12□□□□□ -0.49
AMBRA1-207ENST00000529553 MSANTD2Q6P1R3 559 aa12□□□□□ -0.49
AMBRA1-207ENST00000529553 EFL1Q7Z2Z2 1120 aaKnown RBP12□□□□□ -0.49
AMBRA1-207ENST00000529553 ABI3BPQ7Z7G0 1075 aa12□□□□□ -0.49
AMBRA1-207ENST00000529553 CARNMT1Q8N4J0 409 aa12□□□□□ -0.49
AMBRA1-207ENST00000529553 OR13H1Q8NG92 308 aa12□□□□□ -0.49
AMBRA1-207ENST00000529553 ZNF564Q8TBZ8 553 aaPredicted RBP12□□□□□ -0.49
AMBRA1-207ENST00000529553 FRS2Q8WU20 508 aa12□□□□□ -0.49
AMBRA1-207ENST00000529553 OR8D1Q8WZ84 308 aa12□□□□□ -0.49
AMBRA1-207ENST00000529553 EDEM1Q92611 657 aa12□□□□□ -0.49
AMBRA1-207ENST00000529553 GLMNQ92990 594 aa12□□□□□ -0.49
AMBRA1-207ENST00000529553 ARRDC3Q96B67 414 aa12□□□□□ -0.49
AMBRA1-207ENST00000529553 IPO9Q96P70 1041 aaKnown RBP12□□□□□ -0.49
AMBRA1-207ENST00000529553 NIF3L1Q9GZT8 377 aa12□□□□□ -0.49
AMBRA1-207ENST00000529553 LRRC4Q9HBW1 653 aa12□□□□□ -0.49
AMBRA1-207ENST00000529553 APOBEC3GQ9HC16 384 aaKnown RBP12□□□□□ -0.49
AMBRA1-207ENST00000529553 CA5BQ9Y2D0 317 aa12□□□□□ -0.49
AMBRA1-207ENST00000529553 CEP83Q9Y592 693 aa12□□□□□ -0.49
AMBRA1-207ENST00000529553 SPTAN1Q13813 2472 aaKnown RBP12□□□□□ -0.49
AMBRA1-207ENST00000529553 TP53BP1Q12888 1972 aaPredicted RBP11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 C1QTNF3-AMACRE9PGA6 284 aa11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 XPO1O14980 1071 aaKnown RBP11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 SLC31A1O15431 190 aa11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 LIPCP11150 499 aa11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 HNRNPA2B1P22626 353 aaKnown RBP11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 PIK3CAP42336 1068 aa11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 CNTN1Q12860 1018 aa11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 NR0B2Q15466 257 aa11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 ZNF284Q2VY69 593 aa11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 POM121L1PQ3SYA9 428 aa11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 GUSBP11Q6P575 273 aa11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 UNC13DQ70J99 1090 aa11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 HORMAD1Q86X24 394 aa11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 FBXO39Q8N4B4 442 aa11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 PDILTQ8N807 584 aa11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 KCTD13Q8WZ19 329 aa11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 NDRG1Q92597 394 aaKnown RBP11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 NAT6Q93015 286 aa11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 TMX3Q96JJ7 454 aa11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 RPL10LQ96L21 214 aaKnown RBP11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 CALN1Q9BXU9 219 aa11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 CNGB3Q9NQW8 809 aa11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 GPR27Q9NS67 375 aa11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 DNAJC28Q9NX36 388 aa11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 SMC3Q9UQE7 1217 aa11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 RELNP78509 3460 aa11.99□□□□□ -0.49
AMBRA1-207ENST00000529553 PVALEFA0A1B0GWK0 134 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 PMS2P1A4D2B8 440 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 YJEFN3A6XGL0 299 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 E7ENQ6 273 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 H3BM21 787 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 MCF2LO15068 1137 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 MSI1O43347 362 aaKnown RBP11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 NEBLO76041 1014 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 LUC7L3O95232 432 aaKnown RBP11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 CENPBP07199 599 aaPredicted RBP11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 NME1P15531 152 aaKnown RBP11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 CASRP41180 1078 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 PLK1P53350 603 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 METAP1P53582 386 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 TBX4P57082 545 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 TAS2R38P59533 333 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 RPS24P62847 133 aaKnown RBP11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 SLC39A14Q15043 492 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 E2F4Q16254 413 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 ZNF394Q53GI3 561 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 MS4A13Q5J8X5 152 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 C1orf220Q5T0J3 134 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 NADSYN1Q6IA69 706 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 MMS22LQ6ZRQ5 1243 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 Q6ZSR6 202 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 APCDD1Q8J025 514 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 SLC22A18ASQ8N1D0 253 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 SLC4A11Q8NBS3 891 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 CCDC150Q8NCX0 1101 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 ZNF548Q8NEK5 533 aaPredicted RBP11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 PRICKLE1Q96MT3 831 aaPredicted RBP11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 PPP1R9BQ96SB3 815 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 TUBD1Q9UJT1 453 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 SARDHQ9UL12 918 aa11.98□□□□□ -0.49
AMBRA1-207ENST00000529553 SPTY2D1-AS1A0A0U1RR47 76 aa11.97□□□□□ -0.49
AMBRA1-207ENST00000529553 A0A1W2PQU0 124 aa11.97□□□□□ -0.49
AMBRA1-207ENST00000529553 A6NNZ2 444 aa11.97□□□□□ -0.49
AMBRA1-207ENST00000529553 NTN3O00634 580 aaPredicted RBP11.97□□□□□ -0.49
AMBRA1-207ENST00000529553 MAPK13O15264 365 aa11.97□□□□□ -0.49
AMBRA1-207ENST00000529553 AQP9O43315 295 aa11.97□□□□□ -0.49
AMBRA1-207ENST00000529553 ATP9BO43861 1147 aa11.97□□□□□ -0.49
AMBRA1-207ENST00000529553 UGT1A5P35504 534 aa11.97□□□□□ -0.49
AMBRA1-207ENST00000529553 CCR10P46092 362 aa11.97□□□□□ -0.49
AMBRA1-207ENST00000529553 PDX1P52945 283 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms