RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 TRIM38O00635 465 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 SLC7A4O43246 635 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 SLC28A2O43868 658 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 OPA1O60313 960 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 RNGTTO60942 597 aaKnown RBP9.29□□□□□ -0.92
VPS11-203ENST00000529545 DXOO77932 396 aaKnown RBP9.29□□□□□ -0.92
VPS11-203ENST00000529545 LUC7L3O95232 432 aaKnown RBP9.29□□□□□ -0.92
VPS11-203ENST00000529545 IGLV3-27P01718 113 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 MYL1P05976 194 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 VDRP11473 427 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 CD46P15529 392 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 MZF1P28698 734 aaPredicted RBP9.29□□□□□ -0.92
VPS11-203ENST00000529545 RBMS1P29558 406 aaKnown RBP9.29□□□□□ -0.92
VPS11-203ENST00000529545 SLC6A4P31645 630 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 CLCN1P35523 988 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 DAOAP59103 153 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 PPP2CBP62714 309 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 RPS24P62847 133 aaKnown RBP9.29□□□□□ -0.92
VPS11-203ENST00000529545 PPP2CAP67775 309 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 SULT2A1Q06520 285 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 ADAM9Q13443 819 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 LY6DQ14210 128 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 NFIL3Q16649 462 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 RESP18Q5W5W9 173 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 SCML4Q8N228 414 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 OR4C6Q8NH72 309 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 UBA3Q8TBC4 463 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 IRGQQ8WZA9 623 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 CCDC97Q96F63 343 aaPredicted RBP9.29□□□□□ -0.92
VPS11-203ENST00000529545 MED8Q96G25 268 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 HIC2Q96JB3 615 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 LMLNQ96KR4 655 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 SPAG5Q96R06 1193 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 SPSB2Q99619 263 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 CYTH4Q9UIA0 394 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 SLCO3A1Q9UIG8 710 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 PCDHA7Q9UN72 937 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 PCDHB1Q9Y5F3 818 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 MYO18BQ8IUG5 2567 aa9.29□□□□□ -0.92
VPS11-203ENST00000529545 NYNRINQ9P2P1 1898 aaKnown RBP9.28□□□□□ -0.92
VPS11-203ENST00000529545 NEMP2A6NFY4 417 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 C10orf142B7Z368 130 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 C1QTNF3-AMACRE9PGA6 284 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 FFAR2O15552 330 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 RTN2O75298 545 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 CSO75390 466 aaKnown RBP9.28□□□□□ -0.92
VPS11-203ENST00000529545 WISP1O95388 367 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 LTFP02788 710 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 CENPBP07199 599 aaPredicted RBP9.28□□□□□ -0.92
VPS11-203ENST00000529545 GP1BAP07359 652 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 CKMT1AP12532 417 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 ZNF18P17022 549 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 CTSOP43234 321 aaPredicted RBP9.28□□□□□ -0.92
VPS11-203ENST00000529545 CCDC15Q0P6D6 951 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 SLC12A1Q13621 1099 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 FSCBQ5H9T9 825 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 MS4A13Q5J8X5 152 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 NADSYN1Q6IA69 706 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 MMS22LQ6ZRQ5 1243 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 TMC6Q7Z403 805 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 TRIM69Q86WT6 500 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 CFAP52Q8N1V2 620 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 SLC25A45Q8N413 288 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 OR8D1Q8WZ84 308 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 SEMA4DQ92854 862 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 PTPRN2Q92932 1015 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 VCPIP1Q96JH7 1222 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 RPL10LQ96L21 214 aaKnown RBP9.28□□□□□ -0.92
VPS11-203ENST00000529545 PRICKLE1Q96MT3 831 aaPredicted RBP9.28□□□□□ -0.92
VPS11-203ENST00000529545 SERPINB11Q96P15 392 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 PPP1R9BQ96SB3 815 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 USP29Q9HBJ7 922 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 KLHL11Q9NVR0 708 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 USP25Q9UHP3 1055 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 HEMK1Q9Y5R4 338 aaPredicted RBP9.28□□□□□ -0.92
VPS11-203ENST00000529545 NAV2Q8IVL1 2488 aa9.28□□□□□ -0.92
VPS11-203ENST00000529545 ARID1BQ8NFD5 2236 aaPredicted RBP9.28□□□□□ -0.92
VPS11-203ENST00000529545 PLRG1O43660 514 aaKnown RBP9.27□□□□□ -0.93
VPS11-203ENST00000529545 FBXO21O94952 628 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 MOCS2O96007 188 aaPredicted RBP9.27□□□□□ -0.93
VPS11-203ENST00000529545 APOEP02649 317 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 THEGLP0DJG4 465 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 EPB41P11171 864 aaKnown RBP9.27□□□□□ -0.93
VPS11-203ENST00000529545 DGKAP23743 735 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 DRD3P35462 400 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 RGS7P49802 495 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 OXCT1P55809 520 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 KCNMA1Q12791 1236 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 CUL2Q13617 745 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 POM121L1PQ3SYA9 428 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 FOXD4L6Q3SYB3 417 aaPredicted RBP9.27□□□□□ -0.93
VPS11-203ENST00000529545 ACCSLQ4AC99 568 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 DCAF6Q58WW2 860 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 FOXD4L5Q5VV16 416 aaPredicted RBP9.27□□□□□ -0.93
VPS11-203ENST00000529545 TCERG1LQ5VWI1 586 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 CDCP2Q5VXM1 449 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 ATL3Q6DD88 541 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 FOXD4L3Q6VB84 417 aaPredicted RBP9.27□□□□□ -0.93
VPS11-203ENST00000529545 PRICKLE2Q7Z3G6 844 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 CHSY1Q86X52 802 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms