RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 CLCN5P51795 746 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 RNASE9P60153 205 aaKnown RBP6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 AMPD2Q01433 879 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 DEUP1Q05D60 604 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 RING1Q06587 406 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 TBX2Q13207 712 aaPredicted RBP6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 NNTQ13423 1086 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 FZD5Q13467 585 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 PIN1Q13526 163 aaPredicted RBP6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 TRIM14Q14142 442 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 ARID5BQ14865 1188 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 DHCR24Q15392 516 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 MUM1Q2TAK8 710 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 DCAF6Q58WW2 860 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 PERM1Q5SV97 790 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 CFAP58Q5T655 872 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 C1orf228Q6PIY5 440 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 PACS1Q6VY07 963 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 ZNF852Q6ZMS4 543 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 MMS22LQ6ZRQ5 1243 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 TPRG1Q6ZUI0 275 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 SNX32Q86XE0 403 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 TREML1Q86YW5 311 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 BBS7Q8IWZ6 715 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 CPA6Q8N4T0 437 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 FBXL6Q8N531 539 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 FLCNQ8NFG4 579 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 OR8K1Q8NGG5 319 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 DQX1Q8TE96 717 aaKnown RBP6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 FAM3CQ92520 227 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 NKD1Q969G9 470 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 NT5C3BQ969T7 300 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 AZIN2Q96A70 460 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 PLD4Q96BZ4 506 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 CHFRQ96EP1 664 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 MSANTD3Q96H12 275 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 VCPIP1Q96JH7 1222 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 OSBPL6Q9BZF3 934 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 CDH19Q9H159 772 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 MFSD1Q9H3U5 465 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 PRDM9Q9NQV7 894 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 SEPT11Q9NVA2 429 aaKnown RBP6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 RRN3Q9NYV6 651 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 UBAP1Q9NZ09 502 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 ADAM22Q9P0K1 906 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 WDR35Q9P2L0 1181 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 TMEM59LQ9UK28 342 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 LSM7Q9UK45 103 aaKnown RBP6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 AGO1Q9UL18 857 aaKnown RBP6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 TLR6Q9Y2C9 796 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 PIAS3Q9Y6X2 628 aa6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 V9GYY5 206 aaPredicted RBP6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 NUP210Q8TEM1 1887 aaPredicted RBP6.49□□□□□ -1.37
ATPAF1-209ENST00000529214 FAM170AA1A519 330 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 SIGLEC16A6NMB1 481 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 FAM170BA6NMN3 283 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 TRDMT1O14717 391 aaKnown RBP6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 MSI1O43347 362 aaKnown RBP6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 TRUB2O95900 331 aaKnown RBP6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 CALB1P05937 261 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 HNRNPCP07910 306 aaKnown RBP eCLIP6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 AOC1P19801 751 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 CCNCP24863 283 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 PSMA3P25788 255 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 VARSP26640 1264 aaKnown RBP6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 TPP2P29144 1249 aaPredicted RBP6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 AVPR2P30518 371 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 CORO1AP31146 461 aaKnown RBP6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 GBP1P32455 592 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 CHKAP35790 457 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 HARS2P49590 506 aaKnown RBP6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 GALK1P51570 392 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 ZNF75DP51815 510 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 PITX1P78337 314 aaPredicted RBP6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 CDK17Q00537 523 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 GAD2Q05329 585 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 MYBPC3Q14896 1274 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 GAB4Q2WGN9 574 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 SNAP47Q5SQN1 464 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 LY6G5CQ5SRR4 150 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 NAIF1Q69YI7 327 aaPredicted RBP6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 CWF19L1Q69YN2 538 aaKnown RBP6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 NXNQ6DKJ4 435 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 PPP1R2P3Q6NXS1 205 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 WDR59Q6PJI9 974 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 TXNDC11Q6PKC3 985 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 SPATC1Q76KD6 591 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 MON1BQ7L1V2 547 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 TMEM25Q86YD3 366 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 LRRC49Q8IUZ0 686 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 DENND1CQ8IV53 801 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 UNC45BQ8IWX7 931 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 ALDH16A1Q8IZ83 802 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 MCOLN2Q8IZK6 566 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 USP33Q8TEY7 942 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 PGAP3Q96FM1 320 aaPredicted RBP6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 FCRL2Q96LA5 508 aaPredicted RBP6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 SERPINB11Q96P15 392 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 KCTD15Q96SI1 283 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms