RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 NLRP14Q86W24 1093 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 PLPP6Q8IY26 295 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 CFAP52Q8N1V2 620 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 TFB1MQ8WVM0 346 aaKnown RBP8.12□□□□□ -1.11
SSBP3-211ENST00000528787 RSAD2Q8WXG1 361 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 RAPGEF5Q92565 580 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 EDAQ92838 391 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 IGSF8Q969P0 613 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 TTC17Q96AE7 1141 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 HDAC11Q96DB2 347 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 RSPRY1Q96DX4 576 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 LRIG1Q96JA1 1093 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 C16orf45Q96MC5 204 aaPredicted RBP8.12□□□□□ -1.11
SSBP3-211ENST00000528787 PRICKLE1Q96MT3 831 aaPredicted RBP8.12□□□□□ -1.11
SSBP3-211ENST00000528787 OSBPL9Q96SU4 736 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 FEM1AQ9BSK4 669 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 TLR10Q9BXR5 811 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 ADAM33Q9BZ11 813 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 PRDM6Q9NQX0 595 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 ABCB8Q9NUT2 735 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 NUP205Q92621 2012 aa8.12□□□□□ -1.11
SSBP3-211ENST00000528787 REV3LO60673 3130 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 GOLGA6L7A0A1B0GV03 622 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 KANSL1LA0AUZ9 987 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 ESPNB1AK53 854 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 RASA4BC9J798 803 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 DCLK1O15075 740 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 DDX3YO15523 660 aaKnown RBP8.11□□□□□ -1.11
SSBP3-211ENST00000528787 RASA4O43374 803 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 SYNCRIPO60506 623 aaKnown RBP8.11□□□□□ -1.11
SSBP3-211ENST00000528787 GAS8O95995 478 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 FGGP02679 453 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 HNRNPLP14866 589 aaKnown RBP eCLIP8.11□□□□□ -1.113e-24■■■■■ 36.5
SSBP3-211ENST00000528787 AMPD1P23109 780 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 GARSP41250 739 aaKnown RBP8.11□□□□□ -1.11
SSBP3-211ENST00000528787 RPS9P46781 194 aaKnown RBP8.11□□□□□ -1.11
SSBP3-211ENST00000528787 NUBP1P53384 320 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 VCPP55072 806 aaKnown RBP8.11□□□□□ -1.11
SSBP3-211ENST00000528787 SNRPD1P62314 119 aaKnown RBP8.11□□□□□ -1.11
SSBP3-211ENST00000528787 ZXDAP98168 799 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 TNK2Q07912 1038 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 GALNT2Q10471 571 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 SERINC3Q13530 473 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 HNRNPDQ14103 355 aaKnown RBP8.11□□□□□ -1.11
SSBP3-211ENST00000528787 ZNF235Q14590 738 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 WHAMMP3Q1A5X7 153 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 TMEM196Q5HYL7 178 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 PITRM1Q5JRX3 1037 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 KAZNQ674X7 775 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 MBLAC2Q68D91 279 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 HEATR6Q6AI08 1181 aaKnown RBP8.11□□□□□ -1.11
SSBP3-211ENST00000528787 ITPRIPL1Q6GPH6 555 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 DRICH1Q6PGQ1 229 aaPredicted RBP8.11□□□□□ -1.11
SSBP3-211ENST00000528787 MFSD7Q6UXD7 560 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 SYT10Q6XYQ8 523 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 KIAA0907Q7Z7F0 614 aaPredicted RBP8.11□□□□□ -1.11
SSBP3-211ENST00000528787 SLC13A5Q86YT5 568 aaPredicted RBP8.11□□□□□ -1.11
SSBP3-211ENST00000528787 NDUFAF2Q8N183 169 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 PYROXD2Q8N2H3 581 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 PCDH20Q8N6Y1 951 aaKnown RBP8.11□□□□□ -1.11
SSBP3-211ENST00000528787 PLD5Q8N7P1 536 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 CCNYQ8ND76 341 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 PCDH19Q8TAB3 1148 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 KRT35Q92764 455 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 ARHGEF2Q92974 986 aaKnown RBP8.11□□□□□ -1.11
SSBP3-211ENST00000528787 ISG20Q96AZ6 181 aaKnown RBP8.11□□□□□ -1.11
SSBP3-211ENST00000528787 ZFYVE19Q96K21 471 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 LRRC3BQ96PB8 259 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 TSGA13Q96PP4 275 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 SPON2Q9BUD6 331 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 RPP25Q9BUL9 199 aaKnown RBP8.11□□□□□ -1.11
SSBP3-211ENST00000528787 ACE2Q9BYF1 805 aaPredicted RBP8.11□□□□□ -1.11
SSBP3-211ENST00000528787 CIPCQ9C0C6 399 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 LRRC19Q9H756 370 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 HEBP1Q9NRV9 189 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 GPATCH2LQ9NWQ4 482 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 ELOVL2Q9NXB9 296 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 MPP6Q9NZW5 540 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 UBA2Q9UBT2 640 aaPredicted RBP8.11□□□□□ -1.11
SSBP3-211ENST00000528787 SEPT3Q9UH03 358 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 XPO7Q9UIA9 1087 aaKnown RBP8.11□□□□□ -1.11
SSBP3-211ENST00000528787 TRHDEQ9UKU6 1024 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 HS3ST2Q9Y278 367 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 HEY1Q9Y5J3 304 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 NCOR1O75376 2440 aa8.11□□□□□ -1.11
SSBP3-211ENST00000528787 TARSL2A2RTX5 802 aaKnown RBP8.1□□□□□ -1.11
SSBP3-211ENST00000528787 C3orf70A6NLC5 250 aaPredicted RBP8.1□□□□□ -1.11
SSBP3-211ENST00000528787 USP27XA6NNY8 438 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 PI4K2BG5E9Z4 385 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 FAM72CH0Y354 149 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 H7C0C1 242 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 AP3B1O00203 1094 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 CBX4O00257 560 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 DFFAO00273 331 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 KRIT1O00522 736 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 NRG2O14511 850 aaPredicted RBP8.1□□□□□ -1.11
SSBP3-211ENST00000528787 ENC1O14682 589 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 ALOX15BO15296 676 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 PSMD3O43242 534 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 ZNF500O60304 480 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms