RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 RAB3IPQ96QF0 476 aaPredicted RBP4.05□□□□□ -1.76
CLNS1A-208ENST00000527265 WDR24Q96S15 920 aa4.05□□□□□ -1.76
CLNS1A-208ENST00000527265 ATP6V0BQ99437 205 aa4.05□□□□□ -1.76
CLNS1A-208ENST00000527265 MRI1Q9BV20 369 aa4.05□□□□□ -1.76
CLNS1A-208ENST00000527265 SIK2Q9H0K1 926 aa4.05□□□□□ -1.76
CLNS1A-208ENST00000527265 SYNPO2LQ9H987 977 aa4.05□□□□□ -1.76
CLNS1A-208ENST00000527265 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.05□□□□□ -1.76
CLNS1A-208ENST00000527265 SNTG1Q9NSN8 517 aa4.05□□□□□ -1.76
CLNS1A-208ENST00000527265 ALKBH4Q9NXW9 302 aa4.05□□□□□ -1.76
CLNS1A-208ENST00000527265 AKAP7Q9P0M2 348 aaPredicted RBP4.05□□□□□ -1.76
CLNS1A-208ENST00000527265 HCN3Q9P1Z3 774 aa4.05□□□□□ -1.76
CLNS1A-208ENST00000527265 CACNG4Q9UBN1 327 aa4.05□□□□□ -1.76
CLNS1A-208ENST00000527265 SH3BGRL2Q9UJC5 107 aa4.05□□□□□ -1.76
CLNS1A-208ENST00000527265 SUFUQ9UMX1 484 aa4.05□□□□□ -1.76
CLNS1A-208ENST00000527265 CDYLQ9Y232 598 aa4.05□□□□□ -1.76
CLNS1A-208ENST00000527265 DRG1Q9Y295 367 aaKnown RBP4.05□□□□□ -1.76
CLNS1A-208ENST00000527265 ZBTB1Q9Y2K1 713 aa4.05□□□□□ -1.76
CLNS1A-208ENST00000527265 ADAM18Q9Y3Q7 739 aa4.05□□□□□ -1.76
CLNS1A-208ENST00000527265 ZMYM3Q14202 1370 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 TRAV34A0A0B4J273 112 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 GOLGA6L10A0A0M3HER8 536 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 A0A1W2PQM1 296 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 KRT87PA6NCN2 255 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 AGAP5A6NIR3 686 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 CXorf49A8MYA2 514 aaPredicted RBP4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 A8MZ25 164 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 BTBD18B2RXH4 712 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 GCOM1H8Y6P7 765 aaPredicted RBP4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 M0QYT0 321 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 CTDSP2O14595 271 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 CD3EAPO15446 510 aaKnown RBP4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 EXOC3O60645 756 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 SOCS5O75159 536 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 VPS4BO75351 444 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 SEC22BO75396 215 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 CAMTA2O94983 1202 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 AGFG2O95081 481 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 DLDP09622 509 aaKnown RBP4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 HGFP14210 728 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 CHN1P15882 459 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 PTPN2P17706 415 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 ITGB6P18564 788 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 PTAFRP25105 342 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 YY1P25490 414 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 MAPK3P27361 379 aaPredicted RBP4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 TTKP33981 857 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 BMPR1AP36894 532 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 KIR2DL3P43628 341 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 MRPL12P52815 198 aaKnown RBP4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 RCAN1P53805 252 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 POLGP54098 1239 aaPredicted RBP4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 EIF3BP55884 814 aaKnown RBP4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 RRP1P56182 461 aaKnown RBP4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 BPIFB4P59827 614 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 UFM1P61960 85 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 OLR1P78380 273 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 ATP2C1P98194 919 aaPredicted RBP4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 YWHAHQ04917 246 aaPredicted RBP4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 SLFN5Q08AF3 891 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 ACAP1Q15027 740 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 WSCD2Q2TBF2 565 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 PTCHD3Q3KNS1 767 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 FAM47AQ5JRC9 791 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 KRT40Q6A162 431 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 OTOAQ7RTW8 1153 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 POLNQ7Z5Q5 900 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 PTGR2Q8N8N7 351 aaPredicted RBP4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 ANKRD53Q8N9V6 530 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 IL17RCQ8NAC3 791 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 TMEM116Q8NCL8 245 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 ZNF540Q8NDQ6 660 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 SLC17A8Q8NDX2 589 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 NLGN4YQ8NFZ3 816 aaPredicted RBP4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 KIF18AQ8NI77 898 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 DNAJB14Q8TBM8 379 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 DUSP19Q8WTR2 217 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 POMGNT1Q8WZA1 660 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 MRPS27Q92552 414 aaKnown RBP4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 KLHL29Q96CT2 875 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 MASTLQ96GX5 879 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 ZNF668Q96K58 619 aaPredicted RBP4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 PPP1R13BQ96KQ4 1090 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 KLHL32Q96NJ5 620 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 RUNDC3BQ96NL0 473 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 WDFY2Q96P53 400 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 MOGAT1Q96PD6 335 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 FAM129AQ9BZQ8 928 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 TNMDQ9H2S6 317 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 SLC32A1Q9H598 525 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 THAP9Q9H5L6 903 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 SH2D4AQ9H788 454 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 SCPEP1Q9HB40 452 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 SPATS2LQ9NUQ6 558 aaKnown RBP4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 INTS10Q9NVR2 710 aaKnown RBP4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 MPP6Q9NZW5 540 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 USP22Q9UPT9 525 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 KLHL20Q9Y2M5 609 aa4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 PTRH2Q9Y3E5 179 aaKnown RBP4.04□□□□□ -1.76
CLNS1A-208ENST00000527265 ENTPD2Q9Y5L3 495 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms