RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 RACK1P63244 317 aaKnown RBP13.78□□□□□ -0.2
CAPN1-207ENST00000527189 DEUP1Q05D60 604 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 SUZ12Q15022 739 aaKnown RBP13.78□□□□□ -0.2
CAPN1-207ENST00000527189 KRT31Q15323 416 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 TRIP6Q15654 476 aaKnown RBP13.78□□□□□ -0.2
CAPN1-207ENST00000527189 ZNF423Q2M1K9 1284 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 FAM102AQ5T9C2 384 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-207ENST00000527189 OTUD1Q5VV17 481 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-207ENST00000527189 SASS6Q6UVJ0 657 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 DSG4Q86SJ6 1040 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 SETD3Q86TU7 594 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-207ENST00000527189 NAXDQ8IW45 347 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 ANKRD20A12PQ8NF67 263 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 OR2T34Q8NGX1 318 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 EPS8L1Q8TE68 723 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 FRS2Q8WU20 508 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 SNX19Q92543 992 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 SKA1Q96BD8 255 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 HAPLN3Q96S86 360 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 SIK2Q9H0K1 926 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 VPS16Q9H269 839 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 GANQ9H2C0 597 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 KDM4CQ9H3R0 1056 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 TM9SF3Q9HD45 589 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 TM7SF3Q9NS93 570 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 ANO10Q9NW15 660 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 SLC25A13Q9UJS0 675 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 TMEM59LQ9UK28 342 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 SPAARA0A1B0GVQ0 90 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 A0A1B0GVT2 93 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 A0A1W2PP55 124 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 A0A1W2PPC4 97 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 ALOX15BO15296 676 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 RNASEH2AO75792 299 aaKnown RBP13.77□□□□□ -0.21
CAPN1-207ENST00000527189 ENDOD1O94919 500 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 IGHV4-34P06331 123 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 MMEP08473 750 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 STK19P49842 368 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-207ENST00000527189 CCR5P51681 352 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 NOMO3P69849 1222 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 KRT83P78385 493 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 CDR2Q01850 454 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 BNC1Q01954 994 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 CENPCQ03188 943 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 NUMA1Q14980 2115 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 TAF3Q5VWG9 929 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 FAM46CQ5VWP2 391 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 TRIM72Q6ZMU5 477 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 BNIPLQ7Z465 357 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 C14orf80Q86SX3 495 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 GLRX5Q86SX6 157 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 CIR1Q86X95 450 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-207ENST00000527189 STK40Q8N2I9 435 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 GPT2Q8TD30 523 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 FAM131CQ96AQ9 280 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 ORAI3Q9BRQ5 295 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 C2orf49Q9BVC5 232 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-207ENST00000527189 SCNM1Q9BWG6 230 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 ADAM33Q9BZ11 813 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 RETREG1Q9H6L5 497 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 FANCLQ9NW38 375 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 VPS28Q9UK41 221 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 ZMIZ1Q9ULJ6 1067 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 ANKRD6Q9Y2G4 727 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 NEUROG3Q9Y4Z2 214 aa13.77□□□□□ -0.21
CAPN1-207ENST00000527189 IGLV3-10A0A075B6K4 115 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 FAM221BA6H8Z2 402 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 MCF2LO15068 1137 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 VILLO15195 856 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 FLRT2O43155 660 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 SLC7A4O43246 635 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 CBFA2T3O75081 653 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 IL1BP01584 269 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 CYP1A1P04798 512 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-207ENST00000527189 ZNF18P17022 549 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 PTMSP20962 102 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 MMP8P22894 467 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 SOX5P35711 763 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 NUDT1P36639 197 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 FLT3P36888 993 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 STAT1P42224 750 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 JAM2P57087 298 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 POLR2FP61218 127 aaKnown RBP13.76□□□□□ -0.21
CAPN1-207ENST00000527189 KIF19Q2TAC6 998 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 ACCSLQ4AC99 568 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 C6orf118Q5T5N4 469 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 NAA35Q5VZE5 725 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 NCEH1Q6PIU2 408 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 ZNF783Q6ZMS7 281 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 ZNF683Q8IZ20 524 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 SH2D3CQ8N5H7 860 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 AADATQ8N5Z0 425 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 CPA5Q8WXQ8 436 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 OR8D1Q8WZ84 308 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 TBCBQ99426 244 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 SERGEFQ9UGK8 458 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 LIMA1Q9UHB6 759 aaKnown RBP13.76□□□□□ -0.21
CAPN1-207ENST00000527189 NOCTQ9UK39 431 aaKnown RBP13.76□□□□□ -0.21
CAPN1-207ENST00000527189 PCOLCE2Q9UKZ9 415 aa13.76□□□□□ -0.21
CAPN1-207ENST00000527189 HS3ST2Q9Y278 367 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms