RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 HNRNPA1L2Q32P51 320 aaKnown RBP12.88□□□□□ -0.35
VEGFA-225ENST00000523950 FAM72AQ5TYM5 149 aa12.88□□□□□ -0.35
VEGFA-225ENST00000523950 FAM72DQ6L9T8 149 aa12.88□□□□□ -0.35
VEGFA-225ENST00000523950 KIAA1211LQ6NV74 962 aa12.88□□□□□ -0.35
VEGFA-225ENST00000523950 TFAP2DQ7Z6R9 452 aa12.88□□□□□ -0.35
VEGFA-225ENST00000523950 FAM72BQ86X60 149 aa12.88□□□□□ -0.35
VEGFA-225ENST00000523950 PGBD3Q8N328 593 aa12.88□□□□□ -0.35
VEGFA-225ENST00000523950 RTL3Q8N8U3 475 aaKnown RBP12.88□□□□□ -0.35
VEGFA-225ENST00000523950 OR52K2Q8NGK3 314 aa12.88□□□□□ -0.35
VEGFA-225ENST00000523950 TEKT4Q8WW24 435 aa12.88□□□□□ -0.35
VEGFA-225ENST00000523950 ANP32BQ92688 251 aaKnown RBP12.88□□□□□ -0.35
VEGFA-225ENST00000523950 MRGPRX1Q96LB2 322 aa12.88□□□□□ -0.35
VEGFA-225ENST00000523950 PEBP4Q96S96 227 aa12.88□□□□□ -0.35
VEGFA-225ENST00000523950 PACSIN1Q9BY11 444 aa12.88□□□□□ -0.35
VEGFA-225ENST00000523950 DHX35Q9H5Z1 703 aaKnown RBP12.88□□□□□ -0.35
VEGFA-225ENST00000523950 PCSK1NQ9UHG2 260 aa12.88□□□□□ -0.35
VEGFA-225ENST00000523950 SMG5Q9UPR3 1016 aaKnown RBP12.88□□□□□ -0.35
VEGFA-225ENST00000523950 HS3ST2Q9Y278 367 aa12.88□□□□□ -0.35
VEGFA-225ENST00000523950 WDFY4Q6ZS81 3184 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 EDDM13A0A1B0GTR0 161 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 PRR23AA6NEV1 266 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 CREB3O43889 395 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 IPO7O95373 1038 aaKnown RBP12.87□□□□□ -0.35
VEGFA-225ENST00000523950 NDUFV2P19404 249 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 P2RY2P41231 377 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 ARHGAP25P42331 645 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 HCAR3P49019 387 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 YBEYP58557 167 aaPredicted RBP12.87□□□□□ -0.35
VEGFA-225ENST00000523950 TPI1P60174 286 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 GNA12Q03113 381 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 SLC20A2Q08357 652 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 SPA17Q15506 151 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 DPYSL2Q16555 572 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 HADHQ16836 314 aaKnown RBP12.87□□□□□ -0.35
VEGFA-225ENST00000523950 LAIR1Q6GTX8 287 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 RETSATQ6NUM9 610 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 CYP4V2Q6ZWL3 525 aaPredicted RBP12.87□□□□□ -0.35
VEGFA-225ENST00000523950 CEP68Q76N32 757 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 PYROXD2Q8N2H3 581 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 SUMF1Q8NBK3 374 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 RFFLQ8WZ73 363 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 PRCCQ92733 491 aaPredicted RBP12.87□□□□□ -0.35
VEGFA-225ENST00000523950 LOXL4Q96JB6 756 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 ZC3H10Q96K80 434 aaKnown RBP12.87□□□□□ -0.35
VEGFA-225ENST00000523950 PSMB7Q99436 277 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 PHOX2BQ99453 314 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 TPSD1Q9BZJ3 242 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 MAGEH1Q9H213 219 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 PRDM16Q9HAZ2 1276 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 SCML1Q9UN30 329 aa12.87□□□□□ -0.35
VEGFA-225ENST00000523950 A0A0D9SEW6 157 aa12.86□□□□□ -0.35
VEGFA-225ENST00000523950 ZSCAN5CA6NGD5 496 aaPredicted RBP12.86□□□□□ -0.35
VEGFA-225ENST00000523950 EEF2KO00418 725 aaKnown RBP12.86□□□□□ -0.35
VEGFA-225ENST00000523950 ATP9BO43861 1147 aa12.86□□□□□ -0.35
VEGFA-225ENST00000523950 RAMP2O60895 175 aa12.86□□□□□ -0.35
VEGFA-225ENST00000523950 RHOBTB1O94844 696 aa12.86□□□□□ -0.35
VEGFA-225ENST00000523950 PROSCO94903 275 aa12.86□□□□□ -0.35
VEGFA-225ENST00000523950 HLA-EP13747 358 aa12.86□□□□□ -0.35
VEGFA-225ENST00000523950 CTSOP43234 321 aaPredicted RBP12.86□□□□□ -0.35
VEGFA-225ENST00000523950 MAGEA1P43355 309 aa12.86□□□□□ -0.35
VEGFA-225ENST00000523950 COPAP53621 1224 aa12.86□□□□□ -0.35
VEGFA-225ENST00000523950 GEMIN4P57678 1058 aaKnown RBP12.86□□□□□ -0.35
VEGFA-225ENST00000523950 SLC25A11Q02978 314 aaKnown RBP12.86□□□□□ -0.35
VEGFA-225ENST00000523950 SFSWAPQ12872 951 aaKnown RBP12.86□□□□□ -0.35
VEGFA-225ENST00000523950 ELF2Q15723 593 aa12.86□□□□□ -0.35
VEGFA-225ENST00000523950 MAP7D1Q3KQU3 841 aa12.86□□□□□ -0.35
VEGFA-225ENST00000523950 SPDYCQ5MJ68 293 aa12.86□□□□□ -0.35
VEGFA-225ENST00000523950 SLC36A4Q6YBV0 504 aa12.86□□□□□ -0.35
VEGFA-225ENST00000523950 PRR23BQ6ZRT6 265 aa12.86□□□□□ -0.35
VEGFA-225ENST00000523950 TMPRSS6Q8IU80 811 aa12.86□□□□□ -0.35
VEGFA-225ENST00000523950 SH2D3CQ8N5H7 860 aa12.86□□□□□ -0.35
VEGFA-225ENST00000523950 SLC35G2Q8TBE7 412 aa12.86□□□□□ -0.35
VEGFA-225ENST00000523950 ARHGEF2Q92974 986 aaKnown RBP12.86□□□□□ -0.35
VEGFA-225ENST00000523950 SIPA1Q96FS4 1042 aa12.86□□□□□ -0.35
VEGFA-225ENST00000523950 CALR3Q96L12 384 aaKnown RBP12.86□□□□□ -0.35
VEGFA-225ENST00000523950 ACE2Q9BYF1 805 aaPredicted RBP12.86□□□□□ -0.35
VEGFA-225ENST00000523950 ZWILCHQ9H900 591 aa12.86□□□□□ -0.35
VEGFA-225ENST00000523950 ATP13A1Q9HD20 1204 aa12.86□□□□□ -0.35
VEGFA-225ENST00000523950 PRSS16Q9NQE7 514 aa12.86□□□□□ -0.35
VEGFA-225ENST00000523950 VPS51Q9UID3 782 aa12.86□□□□□ -0.35
VEGFA-225ENST00000523950 SPAG17Q6Q759 2223 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 H3BRJ5 948 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 ALOX15BO15296 676 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 GFRA3O60609 400 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 RNASEH1O60930 286 aaKnown RBP12.85□□□□□ -0.35
VEGFA-225ENST00000523950 SIN3BO75182 1162 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 NDUFA10O95299 355 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 IGLV3-19P01714 112 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 ACADMP11310 421 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 IL1R2P27930 398 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 OXTRP30559 389 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 ARL4AP40617 200 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 STK19P49842 368 aaPredicted RBP12.85□□□□□ -0.35
VEGFA-225ENST00000523950 NDST2P52849 883 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 HADHBP55084 474 aaKnown RBP12.85□□□□□ -0.35
VEGFA-225ENST00000523950 GSDMDP57764 484 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 SRSF5Q13243 272 aaKnown RBP12.85□□□□□ -0.35
VEGFA-225ENST00000523950 ELAVL3Q14576 367 aaKnown RBP12.85□□□□□ -0.35
VEGFA-225ENST00000523950 POLD3Q15054 466 aaPredicted RBP12.85□□□□□ -0.35
VEGFA-225ENST00000523950 PARP15Q460N3 678 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 484.6 ms