RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 VSTM1Q6UX27 236 aa4.51□□□□□ -1.69
NSMCE2-211ENST00000523549 EPM2AIP1Q7L775 607 aaPredicted RBP4.51□□□□□ -1.69
NSMCE2-211ENST00000523549 TPH2Q8IWU9 490 aa4.51□□□□□ -1.69
NSMCE2-211ENST00000523549 SPARTQ8N0X7 666 aa4.51□□□□□ -1.69
NSMCE2-211ENST00000523549 DNAJB14Q8TBM8 379 aa4.51□□□□□ -1.69
NSMCE2-211ENST00000523549 STAG1Q8WVM7 1258 aa4.51□□□□□ -1.69
NSMCE2-211ENST00000523549 EDC3Q96F86 508 aaKnown RBP4.51□□□□□ -1.69
NSMCE2-211ENST00000523549 WDYHV1Q96HA8 205 aa4.51□□□□□ -1.69
NSMCE2-211ENST00000523549 LRGUKQ96M69 825 aa4.51□□□□□ -1.69
NSMCE2-211ENST00000523549 ZNF518BQ9C0D4 1074 aa4.51□□□□□ -1.69
NSMCE2-211ENST00000523549 TRIM36Q9NQ86 728 aa4.51□□□□□ -1.69
NSMCE2-211ENST00000523549 MUTYHQ9UIF7 546 aa4.51□□□□□ -1.69
NSMCE2-211ENST00000523549 MAFFQ9ULX9 164 aa4.51□□□□□ -1.69
NSMCE2-211ENST00000523549 PAXBP1Q9Y5B6 917 aa4.51□□□□□ -1.69
NSMCE2-211ENST00000523549 CDY1Q9Y6F8 540 aa4.51□□□□□ -1.69
NSMCE2-211ENST00000523549 KALRNO60229 2985 aa4.51□□□□□ -1.69
NSMCE2-211ENST00000523549 C2CD3Q4AC94 2353 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 GAKO14976 1311 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 TRIM43BA6NCK2 446 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 TMEM221A6NGB7 291 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 M0R296 226 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 CLIC1O00299 241 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 TMPRSS11DO60235 418 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 TUSC2O75896 110 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 STARD3NLO95772 234 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 PRKAR1BP31321 381 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 CDKN2AP42771 156 aaKnown RBP4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 RAB27AP51159 221 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 YPEL5P62699 121 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 SLC14A1Q13336 389 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 KCNB1Q14721 858 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 ZNF750Q32MQ0 723 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 EARS2Q5JPH6 523 aaKnown RBP4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 DAB2IPQ5VWQ8 1189 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 ZNF549Q6P9A3 640 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 ZDHHC24Q6UX98 284 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 NPNTQ6UXI9 565 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 MAEAQ7L5Y9 396 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 OVCH2Q7RTZ1 564 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 ANKRD13AQ8IZ07 590 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 C12orf76Q8N812 135 aaPredicted RBP4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 ZBTB34Q8NCN2 500 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 IL31RAQ8NI17 732 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 TRIM43Q96BQ3 446 aaPredicted RBP4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 CDH19Q9H159 772 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 SEMA4BQ9NPR2 832 aaPredicted RBP4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 A1CFQ9NQ94 594 aaKnown RBP4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 UBR5O95071 2799 aaPredicted RBP4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 SPTA1P02549 2419 aa4.5□□□□□ -1.69
NSMCE2-211ENST00000523549 ARAP2Q8WZ64 1704 aa4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 DMXL2Q8TDJ6 3036 aa4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 EME2A4GXA9 379 aaPredicted RBP4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 C4orf47A7E2U8 309 aa4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 TNPO2O14787 897 aaKnown RBP4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 TBX3O15119 743 aa4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 PDGFRBP09619 1106 aa4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 MCM5P33992 734 aa4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 Q6ZTC4 211 aa4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 C18orf65Q6ZTR6 163 aa4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 MICU3Q86XE3 530 aa4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 APOBEC3FQ8IUX4 373 aaKnown RBP4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 ADHFE1Q8IWW8 467 aa4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 AGBL3Q8NEM8 1001 aa4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 OR56A3Q8NH54 315 aa4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 B4GALNT2Q8NHY0 566 aa4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 SPSB4Q96A44 273 aa4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 THOC3Q96J01 351 aaKnown RBP4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 B3GNT5Q9BYG0 378 aa4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 DEFB129Q9H1M3 183 aa4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 TMEM8AQ9HCN3 771 aa4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 DDX56Q9NY93 547 aaKnown RBP4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 SEMA5BQ9P283 1151 aa4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 PROCRQ9UNN8 238 aa4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 CEMIPQ8WUJ3 1361 aa4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 AKAP13Q12802 2813 aa4.49□□□□□ -1.69
NSMCE2-211ENST00000523549 MBD3L4A6NDZ8 208 aaPredicted RBP4.48□□□□□ -1.69
NSMCE2-211ENST00000523549 MBD3L3A6NE82 208 aaPredicted RBP4.48□□□□□ -1.69
NSMCE2-211ENST00000523549 EPOPA6NHQ4 379 aa4.48□□□□□ -1.69
NSMCE2-211ENST00000523549 CD3EAPO15446 510 aaKnown RBP4.48□□□□□ -1.69
NSMCE2-211ENST00000523549 CCP110O43303 1012 aa4.48□□□□□ -1.69
NSMCE2-211ENST00000523549 SRGAP2O75044 1071 aa4.48□□□□□ -1.69
NSMCE2-211ENST00000523549 SLC7A1P30825 629 aa4.48□□□□□ -1.69
NSMCE2-211ENST00000523549 B4GALNT1Q00973 533 aa4.48□□□□□ -1.69
NSMCE2-211ENST00000523549 STIM1Q13586 685 aa4.48□□□□□ -1.69
NSMCE2-211ENST00000523549 VGLL4Q14135 290 aa4.48□□□□□ -1.69
NSMCE2-211ENST00000523549 MFSD13AQ14CX5 517 aa4.48□□□□□ -1.69
NSMCE2-211ENST00000523549 HLFQ16534 295 aa4.48□□□□□ -1.69
NSMCE2-211ENST00000523549 INSCQ1MX18 579 aa4.48□□□□□ -1.69
NSMCE2-211ENST00000523549 TRIM60Q495X7 471 aa4.48□□□□□ -1.69
NSMCE2-211ENST00000523549 SWSAP1Q6NVH7 229 aa4.48□□□□□ -1.69
NSMCE2-211ENST00000523549 CLEC4GQ6UXB4 293 aa4.48□□□□□ -1.69
NSMCE2-211ENST00000523549 CHPFQ8IZ52 775 aa4.48□□□□□ -1.69
NSMCE2-211ENST00000523549 SUCLG2Q96I99 432 aa4.48□□□□□ -1.69
NSMCE2-211ENST00000523549 ZBTB45Q96K62 511 aaPredicted RBP4.48□□□□□ -1.69
NSMCE2-211ENST00000523549 HS6ST2Q96MM7 605 aa4.48□□□□□ -1.69
NSMCE2-211ENST00000523549 PPP1R9BQ96SB3 815 aa4.48□□□□□ -1.69
NSMCE2-211ENST00000523549 MXD3Q9BW11 206 aa4.48□□□□□ -1.69
NSMCE2-211ENST00000523549 C22orf23Q9BZE7 217 aa4.48□□□□□ -1.69
NSMCE2-211ENST00000523549 SLC28A3Q9HAS3 691 aa4.48□□□□□ -1.69
NSMCE2-211ENST00000523549 ZCCHC17Q9NP64 241 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms