RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 SH2D3CQ8N5H7 860 aa9.71□□□□□ -0.86
CLK4-209ENST00000521621 HCAR2Q8TDS4 363 aa9.71□□□□□ -0.86
CLK4-209ENST00000521621 TSC1Q92574 1164 aa9.71□□□□□ -0.86
CLK4-209ENST00000521621 THAP2Q9H0W7 228 aa9.71□□□□□ -0.86
CLK4-209ENST00000521621 RAB23Q9ULC3 237 aa9.71□□□□□ -0.86
CLK4-209ENST00000521621 KDELR3O43731 214 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 LRIG2O94898 1065 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 PROSCO94903 275 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 ADH1BP00325 375 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 NDUFV2P19404 249 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 NUDT1P36639 197 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 NNMTP40261 264 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 ARSEP51690 589 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 LIMK1P53667 647 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 GNA12Q03113 381 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 SERPINA13PQ6UXR4 307 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 KBTBD6Q86V97 674 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 TMTC1Q8IUR5 882 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 LRRC49Q8IUZ0 686 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 APCDD1Q8J025 514 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 TMIEQ8NEW7 156 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 CPLX3Q8WVH0 158 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 ARHGEF2Q92974 986 aaKnown RBP9.7□□□□□ -0.86
CLK4-209ENST00000521621 ZNF419Q96HQ0 510 aaPredicted RBP9.7□□□□□ -0.86
CLK4-209ENST00000521621 LRIG1Q96JA1 1093 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 CCDC42Q96M95 316 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.7□□□□□ -0.86
CLK4-209ENST00000521621 SGK2Q9HBY8 427 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 STIM2Q9P246 746 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 R4GN57 208 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 IGHV1OR15-9A0A0B4J2B8 117 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 WASH3PC4AMC7 463 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 CNTN5O94779 1100 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 SDHBP21912 280 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 IRAK1P51617 712 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 RPS14P62263 151 aaKnown RBP9.7□□□□□ -0.86
CLK4-209ENST00000521621 SLC25A11Q02978 314 aaKnown RBP9.7□□□□□ -0.86
CLK4-209ENST00000521621 ELAVL3Q14576 367 aaKnown RBP9.7□□□□□ -0.86
CLK4-209ENST00000521621 FNDC3BQ53EP0 1204 aaKnown RBP9.7□□□□□ -0.86
CLK4-209ENST00000521621 INO80DQ53TQ3 878 aaPredicted RBP9.7□□□□□ -0.86
CLK4-209ENST00000521621 RNF219Q5W0B1 726 aaPredicted RBP9.7□□□□□ -0.86
CLK4-209ENST00000521621 ZNF776Q68DI1 518 aaPredicted RBP9.7□□□□□ -0.86
CLK4-209ENST00000521621 RETSATQ6NUM9 610 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 KIAA1211LQ6NV74 962 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 ASCL5Q7RTU5 278 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 CTNNBL1Q8WYA6 563 aaPredicted RBP9.7□□□□□ -0.86
CLK4-209ENST00000521621 NUP85Q9BW27 656 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 CIPCQ9C0C6 399 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 MBD1Q9UIS9 605 aaPredicted RBP9.7□□□□□ -0.86
CLK4-209ENST00000521621 USP18Q9UMW8 372 aa9.7□□□□□ -0.86
CLK4-209ENST00000521621 SYNJ2BP-COX16A0A087WUM0 186 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 PRPSAP2O60256 369 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 GJB6O95452 261 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 GSRP00390 522 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 MZF1P28698 734 aaPredicted RBP9.69□□□□□ -0.86
CLK4-209ENST00000521621 MIPP30301 263 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 OR1E1P30953 314 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 SLC1A1P43005 524 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 CSNK1DP48730 415 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 DPYSQ14117 519 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 ELF2Q15723 593 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 CSRP2Q16527 193 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 DSG4Q86SJ6 1040 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 FAM160A2Q8N612 972 aaPredicted RBP9.69□□□□□ -0.86
CLK4-209ENST00000521621 PCDH20Q8N6Y1 951 aaKnown RBP9.69□□□□□ -0.86
CLK4-209ENST00000521621 PRCCQ92733 491 aaPredicted RBP9.69□□□□□ -0.86
CLK4-209ENST00000521621 PTPRN2Q92932 1015 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 FAF2Q96CS3 445 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 KLC2Q9H0B6 622 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 SIK2Q9H0K1 926 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 PABPC3Q9H361 631 aaKnown RBP9.69□□□□□ -0.86
CLK4-209ENST00000521621 LRRC19Q9H756 370 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 LUC7LQ9NQ29 371 aaKnown RBP9.69□□□□□ -0.86
CLK4-209ENST00000521621 COX16Q9P0S2 106 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 GMEB2Q9UKD1 530 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 AP4E1Q9UPM8 1137 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 GFRA3O60609 400 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 C5AR1P21730 350 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 TGM1P22735 817 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 GFPT1Q06210 699 aaPredicted RBP9.69□□□□□ -0.86
CLK4-209ENST00000521621 RFTN1Q14699 578 aaPredicted RBP9.69□□□□□ -0.86
CLK4-209ENST00000521621 PDK2Q15119 407 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 OR52K2Q8NGK3 314 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 RFFLQ8WZ73 363 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 FOXJ1Q92949 421 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 CCDC114Q96M63 670 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 ZNF599Q96NL3 588 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 PEBP4Q96S96 227 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 FAM129BQ96TA1 746 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 PHOX2BQ99453 314 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 SNRNP25Q9BV90 132 aaKnown RBP9.69□□□□□ -0.86
CLK4-209ENST00000521621 WSB2Q9NYS7 404 aaPredicted RBP9.69□□□□□ -0.86
CLK4-209ENST00000521621 MFHAS1Q9Y4C4 1052 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 BCLAF3A2AJT9 711 aaKnown RBP9.69□□□□□ -0.86
CLK4-209ENST00000521621 FAM72CH0Y354 149 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 MYO1FO00160 1098 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 MCF2LO15068 1137 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 AKR1B10O60218 316 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 RNASEH1O60930 286 aaKnown RBP9.69□□□□□ -0.86
CLK4-209ENST00000521621 EPHX1P07099 455 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms