RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 GIPC1O14908 333 aa17.52■□□□□ 0.4
SQLE-205ENST00000521232 MID1O15344 667 aa17.52■□□□□ 0.4
SQLE-205ENST00000521232 TEX33O43247 280 aa17.52■□□□□ 0.4
SQLE-205ENST00000521232 ATP9BO43861 1147 aa17.52■□□□□ 0.4
SQLE-205ENST00000521232 OPHN1O60890 802 aa17.52■□□□□ 0.4
SQLE-205ENST00000521232 SLC8A1P32418 973 aa17.52■□□□□ 0.4
SQLE-205ENST00000521232 NSFP46459 744 aaKnown RBP17.52■□□□□ 0.4
SQLE-205ENST00000521232 NUMBP49757 651 aa17.52■□□□□ 0.4
SQLE-205ENST00000521232 CLEC16AQ2KHT3 1053 aa17.52■□□□□ 0.4
SQLE-205ENST00000521232 CCDC14Q49A88 953 aa17.52■□□□□ 0.4
SQLE-205ENST00000521232 PHLDB2Q86SQ0 1253 aa17.52■□□□□ 0.4
SQLE-205ENST00000521232 SETD3Q86TU7 594 aaPredicted RBP17.52■□□□□ 0.4
SQLE-205ENST00000521232 STK40Q8N2I9 435 aa17.52■□□□□ 0.4
SQLE-205ENST00000521232 HDDC3Q8N4P3 179 aa17.52■□□□□ 0.4
SQLE-205ENST00000521232 ZCCHC9Q8N567 271 aaKnown RBP17.52■□□□□ 0.4
SQLE-205ENST00000521232 BIRC7Q96CA5 298 aa17.52■□□□□ 0.4
SQLE-205ENST00000521232 AGPAT1Q99943 283 aa17.52■□□□□ 0.4
SQLE-205ENST00000521232 OSGEPQ9NPF4 335 aa17.52■□□□□ 0.4
SQLE-205ENST00000521232 ADAM22Q9P0K1 906 aa17.52■□□□□ 0.4
SQLE-205ENST00000521232 ADAMTS1Q9UHI8 967 aa17.52■□□□□ 0.4
SQLE-205ENST00000521232 SLC25A13Q9UJS0 675 aa17.52■□□□□ 0.4
SQLE-205ENST00000521232 VPS28Q9UK41 221 aa17.52■□□□□ 0.4
SQLE-205ENST00000521232 CABIN1Q9Y6J0 2220 aa17.51■□□□□ 0.39
SQLE-205ENST00000521232 E9PAM4 449 aa17.51■□□□□ 0.39
SQLE-205ENST00000521232 GJB3O75712 270 aa17.51■□□□□ 0.39
SQLE-205ENST00000521232 RHOCP08134 193 aa17.51■□□□□ 0.39
SQLE-205ENST00000521232 VAV1P15498 845 aa17.51■□□□□ 0.39
SQLE-205ENST00000521232 C5AR1P21730 350 aa17.51■□□□□ 0.39
SQLE-205ENST00000521232 SDC4P31431 198 aa17.51■□□□□ 0.39
SQLE-205ENST00000521232 PTPN9P43378 593 aa17.51■□□□□ 0.39
SQLE-205ENST00000521232 ATP11AP98196 1134 aa17.51■□□□□ 0.39
SQLE-205ENST00000521232 GRIK2Q13002 908 aa17.51■□□□□ 0.39
SQLE-205ENST00000521232 SLC14A1Q13336 389 aa17.51■□□□□ 0.39
SQLE-205ENST00000521232 ELAVL3Q14576 367 aaKnown RBP17.51■□□□□ 0.39
SQLE-205ENST00000521232 STRADAQ7RTN6 431 aa17.51■□□□□ 0.39
SQLE-205ENST00000521232 PIP4P1Q86T03 277 aa17.51■□□□□ 0.39
SQLE-205ENST00000521232 FAM131BQ86XD5 332 aa17.51■□□□□ 0.39
SQLE-205ENST00000521232 OR2I1PQ8NGU4 316 aa17.51■□□□□ 0.39
SQLE-205ENST00000521232 JOSD2Q8TAC2 188 aa17.51■□□□□ 0.39
SQLE-205ENST00000521232 GANCQ8TET4 914 aa17.51■□□□□ 0.39
SQLE-205ENST00000521232 CENPIQ92674 756 aaPredicted RBP17.51■□□□□ 0.39
SQLE-205ENST00000521232 FUCA2Q9BTY2 467 aa17.51■□□□□ 0.39
SQLE-205ENST00000521232 MUC3BQ9H195 1237 aa17.51■□□□□ 0.39
SQLE-205ENST00000521232 NEUROG2Q9H2A3 272 aa17.51■□□□□ 0.39
SQLE-205ENST00000521232 MPP6Q9NZW5 540 aa17.51■□□□□ 0.39
SQLE-205ENST00000521232 NYNRINQ9P2P1 1898 aaKnown RBP17.51■□□□□ 0.39
SQLE-205ENST00000521232 SERGEFQ9UGK8 458 aa17.51■□□□□ 0.39
SQLE-205ENST00000521232 FZD4Q9ULV1 537 aa17.51■□□□□ 0.39
SQLE-205ENST00000521232 CEP295Q9C0D2 2601 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 A0A1W2PP55 124 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 C10orf142B7Z368 130 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 SRGAP2O75044 1071 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 ADH1BP00325 375 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 CALB1P05937 261 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 CCDC172P0C7W6 258 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 KRT3P12035 628 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 FERP16591 822 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 GOT1P17174 413 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 PMLP29590 882 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 ADRA1BP35368 520 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 ZNF165P49910 485 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 GALCP54803 685 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 KRT83P78385 493 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 DLG2Q15700 870 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 C15orf59Q2T9L4 293 aaPredicted RBP17.5■□□□□ 0.39
SQLE-205ENST00000521232 RAB6CQ53S08 254 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 C6orf118Q5T5N4 469 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 LRSAM1Q6UWE0 723 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 IRF2BP2Q7Z5L9 587 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 SH2D3CQ8N5H7 860 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 DEFB124Q8NES8 71 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 PSMB7Q99436 277 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 OMDQ99983 421 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 RAB6CQ9H0N0 254 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 SLC32A1Q9H598 525 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 PPARGC1AQ9UBK2 798 aaKnown RBP17.5■□□□□ 0.39
SQLE-205ENST00000521232 ZNF212Q9UDV6 495 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 MYO6Q9UM54 1294 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 HS3ST2Q9Y278 367 aa17.5■□□□□ 0.39
SQLE-205ENST00000521232 A0A0D9SEW6 157 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 SIGLEC16A6NMB1 481 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 RNASEH2AO75792 299 aaKnown RBP17.49■□□□□ 0.39
SQLE-205ENST00000521232 FSBPO95073 299 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 GJB6O95452 261 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 IL1BP01584 269 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 IGHV4-34P06331 123 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 CD59P13987 128 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 CD27P26842 260 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 OR1E1P30953 314 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 RFC1P35251 1148 aaPredicted RBP17.49■□□□□ 0.39
SQLE-205ENST00000521232 PSMD8P48556 350 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 AFF3P51826 1226 aaKnown RBP17.49■□□□□ 0.39
SQLE-205ENST00000521232 BNC1Q01954 994 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 NRG1Q02297 640 aaPredicted RBP17.49■□□□□ 0.39
SQLE-205ENST00000521232 C1QBPQ07021 282 aaKnown RBP17.49■□□□□ 0.39
SQLE-205ENST00000521232 IQCB1Q15051 598 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 ARL13BQ3SXY8 428 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 ACCSLQ4AC99 568 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 FILIP1LQ4L180 1135 aa17.49■□□□□ 0.39
SQLE-205ENST00000521232 KIAA0895LQ68EN5 471 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 290 ms