RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 AOC1P19801 751 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 HLA-FP30511 346 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 CD70P32970 193 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 CDH4P55283 916 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 SEC13P55735 322 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 ZNF177Q13360 481 aaPredicted RBP15.72■□□□□ 0.11
LSM1-203ENST00000520755 CCINQ13939 588 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 SIX1Q15475 284 aaPredicted RBP15.72■□□□□ 0.11
LSM1-203ENST00000520755 GEN1Q17RS7 908 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 FSCBQ5H9T9 825 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 TMEM31Q5JXX7 168 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 DGKKQ5KSL6 1271 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 KAZNQ674X7 775 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 CXorf57Q6NSI4 855 aaKnown RBP15.72■□□□□ 0.11
LSM1-203ENST00000520755 NUDT18Q6ZVK8 323 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 BBS12Q6ZW61 710 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 CHST9Q7L1S5 443 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 BMP8AQ7Z5Y6 402 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 SLC13A5Q86YT5 568 aaPredicted RBP15.72■□□□□ 0.11
LSM1-203ENST00000520755 RFX6Q8HWS3 928 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 TP53INP2Q8IXH6 220 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 FBXL6Q8N531 539 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 RTL3Q8N8U3 475 aaKnown RBP15.72■□□□□ 0.11
LSM1-203ENST00000520755 ZNF557Q8N988 423 aaPredicted RBP15.72■□□□□ 0.11
LSM1-203ENST00000520755 NETO2Q8NC67 525 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 FIBINQ8TAL6 211 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 ZNF592Q92610 1267 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 PBKQ96KB5 322 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 C1QTNF1Q9BXJ1 281 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 OSBPL6Q9BZF3 934 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 EFR3BQ9Y2G0 817 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 SLC27A6Q9Y2P4 619 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 ANTXRLA6NF34 631 aa15.71■□□□□ 0.11
LSM1-203ENST00000520755 PRRT4C9JH25 899 aa15.71■□□□□ 0.11
LSM1-203ENST00000520755 K7EQS6 105 aa15.71■□□□□ 0.11
LSM1-203ENST00000520755 PDE2AO00408 941 aaPredicted RBP15.71■□□□□ 0.11
LSM1-203ENST00000520755 CST8O60676 142 aa15.71■□□□□ 0.11
LSM1-203ENST00000520755 GPR37L1O60883 481 aa15.71■□□□□ 0.11
LSM1-203ENST00000520755 RNF40O75150 1001 aa15.71■□□□□ 0.11
LSM1-203ENST00000520755 CLDN11O75508 207 aa15.71■□□□□ 0.11
LSM1-203ENST00000520755 PABPC1P11940 636 aaKnown RBP15.71■□□□□ 0.11
LSM1-203ENST00000520755 PECAM1P16284 738 aaPredicted RBP15.71■□□□□ 0.11
LSM1-203ENST00000520755 NUMBP49757 651 aa15.71■□□□□ 0.11
LSM1-203ENST00000520755 CLCN5P51795 746 aa15.71■□□□□ 0.11
LSM1-203ENST00000520755 DYNLT1P63172 113 aa15.71■□□□□ 0.11
LSM1-203ENST00000520755 LMAN2Q12907 356 aa15.71■□□□□ 0.11
LSM1-203ENST00000520755 FZD5Q13467 585 aa15.71■□□□□ 0.11
LSM1-203ENST00000520755 ODF2Q5BJF6 829 aa15.71■□□□□ 0.11
LSM1-203ENST00000520755 NPNTQ6UXI9 565 aa15.71■□□□□ 0.11
LSM1-203ENST00000520755 CREG2Q8IUH2 290 aa15.71■□□□□ 0.11
LSM1-203ENST00000520755 ARHGAP12Q8IWW6 846 aa15.71■□□□□ 0.11
LSM1-203ENST00000520755 CATSPERBQ9H7T0 1116 aa15.71■□□□□ 0.11
LSM1-203ENST00000520755 KIAA1522Q9P206 1035 aaPredicted RBP15.71■□□□□ 0.11
LSM1-203ENST00000520755 GGA2Q9UJY4 613 aa15.71■□□□□ 0.11
LSM1-203ENST00000520755 TTC7AQ9ULT0 858 aaPredicted RBP15.71■□□□□ 0.11
LSM1-203ENST00000520755 PRR33A8MZF0 331 aa15.7■□□□□ 0.1
LSM1-203ENST00000520755 APOL1O14791 398 aa15.7■□□□□ 0.1
LSM1-203ENST00000520755 FGGP02679 453 aa15.7■□□□□ 0.1
LSM1-203ENST00000520755 RHOCP08134 193 aa15.7■□□□□ 0.1
LSM1-203ENST00000520755 CSKP41240 450 aa15.7■□□□□ 0.1
LSM1-203ENST00000520755 TNFRSF4P43489 277 aa15.7■□□□□ 0.1
LSM1-203ENST00000520755 GBE1Q04446 702 aa15.7■□□□□ 0.1
LSM1-203ENST00000520755 SLC10A2Q12908 348 aaPredicted RBP15.7■□□□□ 0.1
LSM1-203ENST00000520755 PAFAH1B3Q15102 231 aaKnown RBP15.7■□□□□ 0.1
LSM1-203ENST00000520755 C2orf27AQ580R0 203 aa15.7■□□□□ 0.1
LSM1-203ENST00000520755 EMC10Q5UCC4 262 aa15.7■□□□□ 0.1
LSM1-203ENST00000520755 AFMIDQ63HM1 303 aa15.7■□□□□ 0.1
LSM1-203ENST00000520755 Q6ZS52 159 aa15.7■□□□□ 0.1
LSM1-203ENST00000520755 AHI1Q8N157 1196 aa15.7■□□□□ 0.1
LSM1-203ENST00000520755 TMEM105Q8N8V8 129 aa15.7■□□□□ 0.1
LSM1-203ENST00000520755 LMLNQ96KR4 655 aa15.7■□□□□ 0.1
LSM1-203ENST00000520755 CAPZA3Q96KX2 299 aa15.7■□□□□ 0.1
LSM1-203ENST00000520755 CIPCQ9C0C6 399 aa15.7■□□□□ 0.1
LSM1-203ENST00000520755 ZDHHC4Q9NPG8 344 aa15.7■□□□□ 0.1
LSM1-203ENST00000520755 SAE1Q9UBE0 346 aaPredicted RBP15.7■□□□□ 0.1
LSM1-203ENST00000520755 R3HDM2Q9Y2K5 976 aaKnown RBP15.7■□□□□ 0.1
LSM1-203ENST00000520755 ANKRD36A6QL64 1941 aa15.7■□□□□ 0.1
LSM1-203ENST00000520755 MYO18AQ92614 2054 aaKnown RBP15.69■□□□□ 0.1
LSM1-203ENST00000520755 A0A0A0MRY4 1105 aa15.69■□□□□ 0.1
LSM1-203ENST00000520755 PGRMC1O00264 195 aaKnown RBP15.69■□□□□ 0.1
LSM1-203ENST00000520755 DAPK3O43293 454 aa15.69■□□□□ 0.1
LSM1-203ENST00000520755 MAP3K6O95382 1288 aa15.69■□□□□ 0.1
LSM1-203ENST00000520755 OR1E1P30953 314 aa15.69■□□□□ 0.1
LSM1-203ENST00000520755 TIE1P35590 1138 aa15.69■□□□□ 0.1
LSM1-203ENST00000520755 MAPKAPK2P49137 400 aa15.69■□□□□ 0.1
LSM1-203ENST00000520755 TFDP2Q14188 446 aa15.69■□□□□ 0.1
LSM1-203ENST00000520755 FUT11Q495W5 492 aa15.69■□□□□ 0.1
LSM1-203ENST00000520755 FBXO43Q4G163 708 aa15.69■□□□□ 0.1
LSM1-203ENST00000520755 C6orf118Q5T5N4 469 aa15.69■□□□□ 0.1
LSM1-203ENST00000520755 TMCO3Q6UWJ1 677 aa15.69■□□□□ 0.1
LSM1-203ENST00000520755 ADAT2Q7Z6V5 191 aaKnown RBP15.69■□□□□ 0.1
LSM1-203ENST00000520755 UMODL1-AS1Q8N2C9 162 aa15.69■□□□□ 0.1
LSM1-203ENST00000520755 SYNPOQ8N3V7 929 aa15.69■□□□□ 0.1
LSM1-203ENST00000520755 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.69■□□□□ 0.1
LSM1-203ENST00000520755 RPLP0P6Q8NHW5 317 aa15.69■□□□□ 0.1
LSM1-203ENST00000520755 KIF18AQ8NI77 898 aa15.69■□□□□ 0.1
LSM1-203ENST00000520755 ACTRT1Q8TDG2 376 aa15.69■□□□□ 0.1
LSM1-203ENST00000520755 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.69■□□□□ 0.1
LSM1-203ENST00000520755 WFIKKN2Q8TEU8 576 aa15.69■□□□□ 0.1
LSM1-203ENST00000520755 CLDN23Q96B33 292 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms