RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 SIGLEC11Q96RL6 698 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 CD180Q99467 661 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 TUBB6Q9BUF5 446 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 NPLQ9BXD5 320 aaPredicted RBP4.91□□□□□ -1.62
SQLE-202ENST00000518604 CADM1Q9BY67 442 aaKnown RBP4.91□□□□□ -1.62
SQLE-202ENST00000518604 UNC45AQ9H3U1 944 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 STN1Q9H668 368 aaKnown RBP4.91□□□□□ -1.62
SQLE-202ENST00000518604 PDGFCQ9NRA1 345 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 PAPOLBQ9NRJ5 636 aaKnown RBP4.91□□□□□ -1.62
SQLE-202ENST00000518604 ARL15Q9NXU5 204 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 IFT80Q9P2H3 777 aaPredicted RBP4.91□□□□□ -1.62
SQLE-202ENST00000518604 TBX20Q9UMR3 447 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.9□□□□□ -1.63
SQLE-202ENST00000518604 DPPA5A6NC42 116 aa4.9□□□□□ -1.63
SQLE-202ENST00000518604 SH2D7A6NKC9 451 aaPredicted RBP4.9□□□□□ -1.63
SQLE-202ENST00000518604 F8W810 466 aa4.9□□□□□ -1.63
SQLE-202ENST00000518604 MSI1O43347 362 aaKnown RBP4.9□□□□□ -1.63
SQLE-202ENST00000518604 NFATC1O95644 943 aa4.9□□□□□ -1.63
SQLE-202ENST00000518604 LYL1P12980 280 aa4.9□□□□□ -1.63
SQLE-202ENST00000518604 FBLP22087 321 aaKnown RBP4.9□□□□□ -1.63
SQLE-202ENST00000518604 MPGP29372 298 aa4.9□□□□□ -1.63
SQLE-202ENST00000518604 CPA2P48052 419 aa4.9□□□□□ -1.63
SQLE-202ENST00000518604 BYSLQ13895 437 aaKnown RBP4.9□□□□□ -1.63
SQLE-202ENST00000518604 BAK1Q16611 211 aa4.9□□□□□ -1.63
SQLE-202ENST00000518604 GJB7Q6PEY0 223 aa4.9□□□□□ -1.63
SQLE-202ENST00000518604 CYB5R4Q7L1T6 521 aa4.9□□□□□ -1.63
SQLE-202ENST00000518604 ADGRF4Q8IZF3 695 aa4.9□□□□□ -1.63
SQLE-202ENST00000518604 C2CD4CQ8TF44 421 aa4.9□□□□□ -1.63
SQLE-202ENST00000518604 NOC3LQ8WTT2 800 aaKnown RBP4.9□□□□□ -1.63
SQLE-202ENST00000518604 STAMQ92783 540 aa4.9□□□□□ -1.63
SQLE-202ENST00000518604 RNFT2Q96EX2 444 aa4.9□□□□□ -1.63
SQLE-202ENST00000518604 FRG2BQ96QU4 278 aa4.9□□□□□ -1.63
SQLE-202ENST00000518604 SEC62Q99442 399 aaKnown RBP4.9□□□□□ -1.63
SQLE-202ENST00000518604 PIMREGQ9BSJ6 248 aa4.9□□□□□ -1.63
SQLE-202ENST00000518604 PRSS22Q9GZN4 317 aa4.9□□□□□ -1.63
SQLE-202ENST00000518604 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.9□□□□□ -1.633e-6■■□□□ 14.1
SQLE-202ENST00000518604 JMJD4Q9H9V9 463 aa4.9□□□□□ -1.63
SQLE-202ENST00000518604 ADARB2Q9NS39 739 aaKnown RBP4.9□□□□□ -1.63
SQLE-202ENST00000518604 KLHL13Q9P2N7 655 aa4.9□□□□□ -1.63
SQLE-202ENST00000518604 CNOT7Q9UIV1 285 aaKnown RBP4.9□□□□□ -1.63
SQLE-202ENST00000518604 GOLGA6L10A0A0M3HER8 536 aa4.89□□□□□ -1.63
SQLE-202ENST00000518604 TP73O15350 636 aa4.89□□□□□ -1.63
SQLE-202ENST00000518604 PRKCHP24723 683 aa4.89□□□□□ -1.63
SQLE-202ENST00000518604 TYK2P29597 1187 aa4.89□□□□□ -1.63
SQLE-202ENST00000518604 HNF1BP35680 557 aa4.89□□□□□ -1.63
SQLE-202ENST00000518604 ID2Q02363 134 aa4.89□□□□□ -1.63
SQLE-202ENST00000518604 KRTAP1-1Q07627 177 aa4.89□□□□□ -1.63
SQLE-202ENST00000518604 SRSF4Q08170 494 aaKnown RBP4.89□□□□□ -1.63
SQLE-202ENST00000518604 GALNT3Q14435 633 aa4.89□□□□□ -1.63
SQLE-202ENST00000518604 PGM5Q15124 567 aa4.89□□□□□ -1.63
SQLE-202ENST00000518604 TRIP6Q15654 476 aaKnown RBP4.89□□□□□ -1.63
SQLE-202ENST00000518604 C5orf22Q49AR2 442 aa4.89□□□□□ -1.63
SQLE-202ENST00000518604 TTC39AQ5SRH9 613 aa4.89□□□□□ -1.63
SQLE-202ENST00000518604 PAPD7Q5XG87 772 aaKnown RBP4.89□□□□□ -1.63
SQLE-202ENST00000518604 YTHDF3Q7Z739 585 aaKnown RBP4.89□□□□□ -1.63
SQLE-202ENST00000518604 IGFN1Q86VF2 1251 aa4.89□□□□□ -1.63
SQLE-202ENST00000518604 TEX19Q8NA77 164 aa4.89□□□□□ -1.63
SQLE-202ENST00000518604 LSM14AQ8ND56 463 aaKnown RBP4.89□□□□□ -1.63
SQLE-202ENST00000518604 ZCCHC10Q8TBK6 192 aa4.89□□□□□ -1.63
SQLE-202ENST00000518604 EIF2AK1Q9BQI3 630 aaKnown RBP4.89□□□□□ -1.63
SQLE-202ENST00000518604 SH2D3AQ9BRG2 576 aa4.89□□□□□ -1.63
SQLE-202ENST00000518604 QTRT1Q9BXR0 403 aaKnown RBP4.89□□□□□ -1.63
SQLE-202ENST00000518604 TTC12Q9H892 705 aaPredicted RBP4.89□□□□□ -1.63
SQLE-202ENST00000518604 Q9N2J8 555 aa4.89□□□□□ -1.63
SQLE-202ENST00000518604 UBN1Q9NPG3 1134 aa4.89□□□□□ -1.63
SQLE-202ENST00000518604 NRIP3Q9NQ35 241 aa4.89□□□□□ -1.63
SQLE-202ENST00000518604 ALKBH4Q9NXW9 302 aa4.89□□□□□ -1.63
SQLE-202ENST00000518604 FBXO40Q9UH90 709 aa4.89□□□□□ -1.63
SQLE-202ENST00000518604 KIR2DS5A0A0G2JLQ3 304 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 FAM90A7PA6NKC0 464 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 CGB1A6NKQ9 187 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 FAM90A22PA8MWA6 464 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 FAM90A12PA8MX19 464 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 FAM90A23PA8MXZ1 464 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 E5RJQ4 531 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 KIR2DS3K7RE56 304 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 MASP2O00187 686 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 STRNO43815 780 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 KIF1CO43896 1103 aaKnown RBP4.88□□□□□ -1.63
SQLE-202ENST00000518604 HBP1O60381 514 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 TLR2O60603 784 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 CNOT3O75175 753 aaKnown RBP4.88□□□□□ -1.63
SQLE-202ENST00000518604 KELP23276 732 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 SKIV2L2P42285 1042 aaKnown RBP4.88□□□□□ -1.63
SQLE-202ENST00000518604 MTNR1AP48039 350 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 CYP2J2P51589 502 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 ZBTB16Q05516 673 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 CAMK1Q14012 370 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 FAM171A1Q5VUB5 890 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 TMEM268Q5VZI3 342 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 SRRM1Q8IYB3 904 aaKnown RBP4.88□□□□□ -1.63
SQLE-202ENST00000518604 ZNF366Q8N895 744 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 RFWD2Q8NHY2 731 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 PIGOQ8TEQ8 1089 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 WIPF2Q8TF74 440 aaPredicted RBP4.88□□□□□ -1.63
SQLE-202ENST00000518604 NTN5Q8WTR8 489 aaPredicted RBP4.88□□□□□ -1.63
SQLE-202ENST00000518604 IP6K1Q92551 441 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 TEFMQ96QE5 360 aaKnown RBP4.88□□□□□ -1.63
SQLE-202ENST00000518604 FUZQ9BT04 418 aa4.88□□□□□ -1.63
SQLE-202ENST00000518604 CTDSP1Q9GZU7 261 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms