RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 SPC24Q8NBT2 197 aa22.55■■□□□ 1.2
VEGFA-217ENST00000518538 SLC35G2Q8TBE7 412 aa22.55■■□□□ 1.2
VEGFA-217ENST00000518538 RFFLQ8WZ73 363 aa22.55■■□□□ 1.2
VEGFA-217ENST00000518538 RPL10LQ96L21 214 aaKnown RBP22.55■■□□□ 1.2
VEGFA-217ENST00000518538 CATSPERBQ9H7T0 1116 aa22.55■■□□□ 1.2
VEGFA-217ENST00000518538 FBRSQ9HAH7 460 aa22.55■■□□□ 1.2
VEGFA-217ENST00000518538 OSGEPQ9NPF4 335 aa22.55■■□□□ 1.2
VEGFA-217ENST00000518538 SLC25A13Q9UJS0 675 aa22.55■■□□□ 1.2
VEGFA-217ENST00000518538 CKAP5Q14008 2032 aa22.55■■□□□ 1.2
VEGFA-217ENST00000518538 WASH4PA8MWX3 477 aa22.54■■□□□ 1.2
VEGFA-217ENST00000518538 FGF10O15520 208 aaPredicted RBP22.54■■□□□ 1.2
VEGFA-217ENST00000518538 LMNAP02545 664 aaKnown RBP22.54■■□□□ 1.2
VEGFA-217ENST00000518538 TCF4P15884 667 aa22.54■■□□□ 1.2
VEGFA-217ENST00000518538 ETFBP38117 255 aa22.54■■□□□ 1.2
VEGFA-217ENST00000518538 STK19P49842 368 aaPredicted RBP22.54■■□□□ 1.2
VEGFA-217ENST00000518538 ZNF135P52742 658 aaPredicted RBP22.54■■□□□ 1.2
VEGFA-217ENST00000518538 COPAP53621 1224 aa22.54■■□□□ 1.2
VEGFA-217ENST00000518538 SLC25A11Q02978 314 aaKnown RBP22.54■■□□□ 1.2
VEGFA-217ENST00000518538 SIM2Q14190 667 aaPredicted RBP22.54■■□□□ 1.2
VEGFA-217ENST00000518538 SPA17Q15506 151 aa22.54■■□□□ 1.2
VEGFA-217ENST00000518538 CEP68Q76N32 757 aa22.54■■□□□ 1.2
VEGFA-217ENST00000518538 SUMF1Q8NBK3 374 aa22.54■■□□□ 1.2
VEGFA-217ENST00000518538 OR7D4Q8NG98 312 aa22.54■■□□□ 1.2
VEGFA-217ENST00000518538 OR2T3Q8NH03 318 aa22.54■■□□□ 1.2
VEGFA-217ENST00000518538 KCTD15Q96SI1 283 aaPredicted RBP22.54■■□□□ 1.2
VEGFA-217ENST00000518538 MKRN2Q9H000 416 aaKnown RBP22.54■■□□□ 1.2
VEGFA-217ENST00000518538 PRSS16Q9NQE7 514 aa22.54■■□□□ 1.2
VEGFA-217ENST00000518538 NDFIP2Q9NV92 336 aa22.54■■□□□ 1.2
VEGFA-217ENST00000518538 DNAI1Q9UI46 699 aa22.54■■□□□ 1.2
VEGFA-217ENST00000518538 VPS51Q9UID3 782 aa22.54■■□□□ 1.2
VEGFA-217ENST00000518538 SLCO3A1Q9UIG8 710 aa22.54■■□□□ 1.2
VEGFA-217ENST00000518538 SMG5Q9UPR3 1016 aaKnown RBP22.54■■□□□ 1.2
VEGFA-217ENST00000518538 SOWAHDA6NJG2 315 aa22.53■■□□□ 1.2
VEGFA-217ENST00000518538 TTC34A8MYJ7 566 aa22.53■■□□□ 1.2
VEGFA-217ENST00000518538 GOLGA6L6A8MZA4 724 aa22.53■■□□□ 1.2
VEGFA-217ENST00000518538 EEF2KO00418 725 aaKnown RBP22.53■■□□□ 1.2
VEGFA-217ENST00000518538 SNAP91O60641 907 aa22.53■■□□□ 1.2
VEGFA-217ENST00000518538 MTA2O94776 668 aa22.53■■□□□ 1.2
VEGFA-217ENST00000518538 PROSCO94903 275 aa22.53■■□□□ 1.2
VEGFA-217ENST00000518538 P2RY2P41231 377 aa22.53■■□□□ 1.2
VEGFA-217ENST00000518538 BYSLQ13895 437 aaKnown RBP22.53■■□□□ 1.2
VEGFA-217ENST00000518538 TEKT4Q8WW24 435 aa22.53■■□□□ 1.2
VEGFA-217ENST00000518538 SLC6A17Q9H1V8 727 aa22.53■■□□□ 1.2
VEGFA-217ENST00000518538 MAGEH1Q9H213 219 aa22.53■■□□□ 1.2
VEGFA-217ENST00000518538 ZWILCHQ9H900 591 aa22.53■■□□□ 1.2
VEGFA-217ENST00000518538 PRDM16Q9HAZ2 1276 aa22.53■■□□□ 1.2
VEGFA-217ENST00000518538 ATP13A1Q9HD20 1204 aa22.53■■□□□ 1.2
VEGFA-217ENST00000518538 DONSONQ9NYP3 566 aa22.53■■□□□ 1.2
VEGFA-217ENST00000518538 HS3ST2Q9Y278 367 aa22.53■■□□□ 1.2
VEGFA-217ENST00000518538 EML5Q05BV3 1969 aa22.52■■□□□ 1.2
VEGFA-217ENST00000518538 EDDM13A0A1B0GTR0 161 aa22.52■■□□□ 1.2
VEGFA-217ENST00000518538 TARSL2A2RTX5 802 aaKnown RBP22.52■■□□□ 1.2
VEGFA-217ENST00000518538 PRR23AA6NEV1 266 aa22.52■■□□□ 1.2
VEGFA-217ENST00000518538 ATP9BO43861 1147 aa22.52■■□□□ 1.2
VEGFA-217ENST00000518538 RAMP2O60895 175 aa22.52■■□□□ 1.2
VEGFA-217ENST00000518538 MAN1A1P33908 653 aa22.52■■□□□ 1.2
VEGFA-217ENST00000518538 MAGEA1P43355 309 aa22.52■■□□□ 1.2
VEGFA-217ENST00000518538 TCEAL1Q15170 157 aa22.52■■□□□ 1.2
VEGFA-217ENST00000518538 DPYSL2Q16555 572 aa22.52■■□□□ 1.2
VEGFA-217ENST00000518538 HADHQ16836 314 aaKnown RBP22.52■■□□□ 1.2
VEGFA-217ENST00000518538 SMTNL2Q2TAL5 461 aa22.52■■□□□ 1.2
VEGFA-217ENST00000518538 PPP6R3Q5H9R7 873 aaPredicted RBP22.52■■□□□ 1.2
VEGFA-217ENST00000518538 KCNT1Q5JUK3 1230 aa22.52■■□□□ 1.2
VEGFA-217ENST00000518538 KIAA1324Q6UXG2 1013 aaKnown RBP22.52■■□□□ 1.2
VEGFA-217ENST00000518538 PRR23BQ6ZRT6 265 aa22.52■■□□□ 1.2
VEGFA-217ENST00000518538 C11orf74Q86VG3 221 aa22.52■■□□□ 1.2
VEGFA-217ENST00000518538 TMPRSS6Q8IU80 811 aa22.52■■□□□ 1.2
VEGFA-217ENST00000518538 SPACA7Q96KW9 195 aa22.52■■□□□ 1.2
VEGFA-217ENST00000518538 SPON2Q9BUD6 331 aa22.52■■□□□ 1.2
VEGFA-217ENST00000518538 MTG2Q9H4K7 406 aa22.52■■□□□ 1.2
VEGFA-217ENST00000518538 LUC7LQ9NQ29 371 aaKnown RBP22.52■■□□□ 1.2
VEGFA-217ENST00000518538 RAB23Q9ULC3 237 aa22.52■■□□□ 1.2
VEGFA-217ENST00000518538 EPN1Q9Y6I3 576 aaPredicted RBP22.52■■□□□ 1.2
VEGFA-217ENST00000518538 ZNF217O75362 1048 aa22.51■■□□□ 1.19
VEGFA-217ENST00000518538 NDUFA10O95299 355 aa22.51■■□□□ 1.19
VEGFA-217ENST00000518538 RARAP10276 462 aa22.51■■□□□ 1.19
VEGFA-217ENST00000518538 C7P10643 843 aa22.51■■□□□ 1.19
VEGFA-217ENST00000518538 ARHGAP25P42331 645 aa22.51■■□□□ 1.19
VEGFA-217ENST00000518538 HCAR3P49019 387 aa22.51■■□□□ 1.19
VEGFA-217ENST00000518538 MAP7D1Q3KQU3 841 aa22.51■■□□□ 1.19
VEGFA-217ENST00000518538 C9orf64Q5T6V5 341 aa22.51■■□□□ 1.19
VEGFA-217ENST00000518538 IL31Q6EBC2 164 aa22.51■■□□□ 1.19
VEGFA-217ENST00000518538 TXNRD3NBQ6F5E7 133 aa22.51■■□□□ 1.19
VEGFA-217ENST00000518538 RFX8Q6ZV50 586 aa22.51■■□□□ 1.19
VEGFA-217ENST00000518538 ASCL5Q7RTU5 278 aa22.51■■□□□ 1.19
VEGFA-217ENST00000518538 METTL3Q86U44 580 aaKnown RBP22.51■■□□□ 1.19
VEGFA-217ENST00000518538 SH2D3CQ8N5H7 860 aa22.51■■□□□ 1.19
VEGFA-217ENST00000518538 RLN3Q8WXF3 142 aa22.51■■□□□ 1.19
VEGFA-217ENST00000518538 HSPH1Q92598 858 aa22.51■■□□□ 1.19
VEGFA-217ENST00000518538 PRCCQ92733 491 aaPredicted RBP22.51■■□□□ 1.19
VEGFA-217ENST00000518538 ARHGEF2Q92974 986 aaKnown RBP22.51■■□□□ 1.19
VEGFA-217ENST00000518538 SIPA1Q96FS4 1042 aa22.51■■□□□ 1.19
VEGFA-217ENST00000518538 BAG1Q99933 345 aaPredicted RBP22.51■■□□□ 1.19
VEGFA-217ENST00000518538 ACE2Q9BYF1 805 aaPredicted RBP22.51■■□□□ 1.19
VEGFA-217ENST00000518538 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.51■■□□□ 1.19
VEGFA-217ENST00000518538 INVSQ9Y283 1065 aa22.51■■□□□ 1.19
VEGFA-217ENST00000518538 PCDHA13Q9Y5I0 950 aa22.51■■□□□ 1.19
VEGFA-217ENST00000518538 CXorf51AA0A1B0GTR3 108 aa22.5■■□□□ 1.19
VEGFA-217ENST00000518538 CBX4O00257 560 aa22.5■■□□□ 1.19
VEGFA-217ENST00000518538 DCLK1O15075 740 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms