RNA–Protein interactions for RNA: ENST00000517052.1

RNU6-448P-201, Transcript of RNA, U6 small nuclear 448, pseudogene, humanhuman

BASIC

Gene RNU6-448P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-448P-201ENST00000517052 DUX5Q96PT3 197 aa0.83□□□□□ -2.28
RNU6-448P-201ENST00000517052 COLEC11Q9BWP8 271 aa0.83□□□□□ -2.28
RNU6-448P-201ENST00000517052 POLDIP3Q9BY77 421 aaKnown RBP0.83□□□□□ -2.28
RNU6-448P-201ENST00000517052 LDHAL6BQ9BYZ2 381 aaPredicted RBP0.83□□□□□ -2.28
RNU6-448P-201ENST00000517052 DDX24Q9GZR7 859 aaKnown RBP eCLIP0.83□□□□□ -2.28
RNU6-448P-201ENST00000517052 OSBPL5Q9H0X9 879 aaPredicted RBP0.83□□□□□ -2.28
RNU6-448P-201ENST00000517052 SFXN1Q9H9B4 322 aa0.83□□□□□ -2.28
RNU6-448P-201ENST00000517052 SDF2L1Q9HCN8 221 aa0.83□□□□□ -2.28
RNU6-448P-201ENST00000517052 KRCC1Q9NPI7 259 aaPredicted RBP0.83□□□□□ -2.28
RNU6-448P-201ENST00000517052 PNRC2Q9NPJ4 139 aaKnown RBP0.83□□□□□ -2.28
RNU6-448P-201ENST00000517052 PRDM11Q9NQV5 511 aa0.83□□□□□ -2.28
RNU6-448P-201ENST00000517052 DDX21Q9NR30 783 aaKnown RBP eCLIP0.83□□□□□ -2.28
RNU6-448P-201ENST00000517052 FBXO28Q9NVF7 368 aa0.83□□□□□ -2.28
RNU6-448P-201ENST00000517052 RGL1Q9NZL6 768 aa0.83□□□□□ -2.28
RNU6-448P-201ENST00000517052 FBXO4Q9UKT5 387 aa0.83□□□□□ -2.28
RNU6-448P-201ENST00000517052 FZD10Q9ULW2 581 aa0.83□□□□□ -2.28
RNU6-448P-201ENST00000517052 SLC8A2Q9UPR5 921 aa0.83□□□□□ -2.28
RNU6-448P-201ENST00000517052 TNFSF13BQ9Y275 285 aa0.83□□□□□ -2.28
RNU6-448P-201ENST00000517052 MAN2B2Q9Y2E5 1009 aa0.83□□□□□ -2.28
RNU6-448P-201ENST00000517052 DTX4Q9Y2E6 619 aa0.83□□□□□ -2.28
RNU6-448P-201ENST00000517052 UBE2J1Q9Y385 318 aaPredicted RBP0.83□□□□□ -2.28
RNU6-448P-201ENST00000517052 DTNAQ9Y4J8 743 aa0.83□□□□□ -2.28
RNU6-448P-201ENST00000517052 SMAD5-AS1Q9Y6J3 95 aa0.83□□□□□ -2.28
RNU6-448P-201ENST00000517052 ATRXP46100 2492 aa0.83□□□□□ -2.28
RNU6-448P-201ENST00000517052 TDRD15B5MCY1 1934 aaKnown RBP0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 MYH15Q9Y2K3 1946 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 COL2A1P02458 1487 aaPredicted RBP0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 CYP3A7-CYP3A51PA0A087WV96 503 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 TRBV5-7A0A0A0MS05 114 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 IGKV6D-41A0A0C4DH26 115 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 A0A1B0GU03 582 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 FAM234BA2RU67 622 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 C3orf70A6NLC5 250 aaPredicted RBP0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 KCNJ18B7U540 433 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 MCIDASD6RGH6 385 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 APOL1O14791 398 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 PCDH17O14917 1159 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 SLC16A5O15375 505 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 MSI1O43347 362 aaKnown RBP0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 LMX1BO60663 402 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 NTSR2O95665 410 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 CER1O95813 267 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 PAK4O96013 591 aaPredicted RBP0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 LCKP06239 509 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 SNRNP70P08621 437 aaKnown RBP0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 CYP3A4P08684 503 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 F7P08709 466 aaPredicted RBP0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 HARSP12081 509 aaKnown RBP0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 SLC5A1P13866 664 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 ZNF12P17014 697 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 CHRNB2P17787 502 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 GNLYP22749 145 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 CYP3A7P24462 503 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 TNFSF8P32971 234 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 SLC16A2P36021 539 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 STT3AP46977 705 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 ADPRHP54922 357 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 FAM3BP58499 235 aaPredicted RBP0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 TAS2R50P59544 299 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 ZP1P60852 638 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 RPL15P61313 204 aaKnown RBP0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 ERVK11-1P61568 191 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 SEC61A1P61619 476 aaKnown RBP0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 TLE3Q04726 772 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 ZBTB16Q05516 673 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 TRAF2Q12933 501 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 TRAF3Q13114 568 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 PMS2P11Q13670 270 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 CSHL1Q14406 222 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 GALNT3Q14435 633 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 HNF4GQ14541 408 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 GRM4Q14833 912 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 SLC1A5Q15758 541 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 HLFQ16534 295 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 DUSP6Q16828 381 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 KIF19Q2TAC6 998 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 ARL13BQ3SXY8 428 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 TDRD12Q587J7 1177 aaKnown RBP0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 ALG10Q5BKT4 473 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 ARL13AQ5H913 290 aaPredicted RBP0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 ALG10BQ5I7T1 473 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 DNTTIP2Q5QJE6 756 aaKnown RBP0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 ANKRD40Q6AI12 368 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 HIBCHQ6NVY1 386 aaPredicted RBP0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 ERAP2Q6P179 960 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 C8orf82Q6P1X6 216 aaPredicted RBP0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 TMEM71Q6P5X7 295 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 TMEM88Q6PEY1 159 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 RHBDF2Q6PJF5 856 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 MEX3BQ6ZN04 569 aaKnown RBP0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 ZNF367Q7RTV3 350 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 MYPOPQ86VE0 399 aaPredicted RBP0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 TTC30AQ86WT1 665 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 DGKHQ86XP1 1220 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 FAM217AQ8IXS0 508 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 CADM3Q8N126 398 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 CLIP4Q8N3C7 705 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 TXLNBQ8N3L3 684 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 NEXN-AS1Q8NBZ9 246 aa0.82□□□□□ -2.28
RNU6-448P-201ENST00000517052 ADPRHL1Q8NDY3 354 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms