RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 TNIP3Q96KP6 325 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 SORBS1Q9BX66 1292 aaKnown RBP3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 POLDIP3Q9BY77 421 aaKnown RBP3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 RMI1Q9H9A7 625 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 IL21RQ9HBE5 538 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 LIN7CQ9NUP9 197 aaKnown RBP3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 ARL15Q9NXU5 204 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 SLC25A13Q9UJS0 675 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 SLC39A10Q9ULF5 831 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 MAGED2Q9UNF1 606 aaPredicted RBP3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 DTX4Q9Y2E6 619 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 RAP2CQ9Y3L5 183 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 COPG1Q9Y678 874 aaKnown RBP3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 EFCAB8A8MWE9 144 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 KIF28PB7ZC32 967 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 ASAP2O43150 1006 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 DNPH1O43598 174 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 PLA2G6O60733 806 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 LDB3O75112 727 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 LCATP04180 440 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 HOXB9P17482 250 aaPredicted RBP3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 KLRK1P26718 216 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 TNFSF8P32971 234 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 HSPA7P48741 367 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 COMPP49747 757 aaPredicted RBP3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 AK2P54819 239 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 POLE2P56282 527 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 FOXL2P58012 376 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 SELENOVP59797 346 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 ABATP80404 500 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 POU3F1Q03052 451 aaPredicted RBP3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 SF3A3Q12874 501 aaKnown RBP eCLIP3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 MPEG1Q2M385 716 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 TDRD12Q587J7 1177 aaKnown RBP3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 SPSB3Q6PJ21 355 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 KSR2Q6VAB6 950 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 FAM83HQ6ZRV2 1179 aaPredicted RBP3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 CREB3L2Q70SY1 520 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 ZNF367Q7RTV3 350 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 RBM23Q86U06 439 aaKnown RBP3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 CUZD1Q86UP6 607 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 SYTL1Q8IYJ3 562 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 ENDOVQ8N8Q3 282 aaKnown RBP3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 LRRC57Q8N9N7 239 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 KDM1BQ8NB78 822 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 OR14A16Q8NHC5 309 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 IPO4Q8TEX9 1081 aaKnown RBP3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 NR4A3Q92570 626 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 C8orf48Q96LL4 319 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 ACTR5Q9H9F9 607 aaPredicted RBP3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 MDFICQ9P1T7 246 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 IL36RNQ9UBH0 155 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 PCDHGB2Q9Y5G2 931 aa3.11□□□□□ -1.91
RNU6-1088P-201ENST00000516850 TRBV5-7A0A0A0MS05 114 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 LOC105371045A0A1W2PR82 267 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 ANO9A1A5B4 782 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 TMEM247A6NEH6 219 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 FCGR1AP12314 374 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 GSTM2P28161 218 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 AVPR1AP37288 418 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 TMPRSS3P57727 454 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 RHAGQ02094 409 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 TRAF1Q13077 416 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 PLCB4Q15147 1175 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 DUSP6Q16828 381 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 ATPAF1Q5TC12 328 aaPredicted RBP3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 GFI1BQ5VTD9 330 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 FAM171A1Q5VUB5 890 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 SLC30A9Q6PML9 568 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 RINLQ6ZS11 566 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 FJX1Q86VR8 437 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 FOXP4Q8IVH2 680 aaPredicted RBP3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 TMEM217Q8N7C4 229 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 PARD3BQ8TEW8 1205 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 RTP4Q96DX8 246 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 GFM1Q96RP9 751 aaKnown RBP3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 MYD88Q99836 296 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 STK33Q9BYT3 514 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 BRD8Q9H0E9 1235 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 HIPK3Q9H422 1215 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 PDE11AQ9HCR9 933 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 SCN5AQ14524 2016 aa3.1□□□□□ -1.91
RNU6-1088P-201ENST00000516850 TCRBV7S3A2A0A539 114 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 MBD3L5A6NJ08 208 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 PPM1GO15355 546 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 TMCC1O94876 653 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 ZNF432O94892 652 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 MYZAPP0CAP1 466 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 TM4SF4P48230 202 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 RCAN1P53805 252 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 PMS2P54278 862 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 SEC61A1P61619 476 aaKnown RBP3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 BTKQ06187 659 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 PICALMQ13492 652 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 SLC39A14Q15043 492 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 RPS6KA2Q15349 733 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 TBRG1Q3YBR2 411 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 ZACNQ401N2 412 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 PLK5Q496M5 336 aa3.09□□□□□ -1.91
RNU6-1088P-201ENST00000516850 C5orf22Q49AR2 442 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms