RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 RASA4BC9J798 803 aa21.49■■□□□ 1.03
LSM6-207ENST00000515311 PGRMC1O00264 195 aaKnown RBP21.49■■□□□ 1.03
LSM6-207ENST00000515311 NCAM2O15394 837 aa21.49■■□□□ 1.03
LSM6-207ENST00000515311 RASA4O43374 803 aa21.49■■□□□ 1.03
LSM6-207ENST00000515311 MZF1P28698 734 aaPredicted RBP21.49■■□□□ 1.03
LSM6-207ENST00000515311 GRIA2P42262 883 aa21.49■■□□□ 1.03
LSM6-207ENST00000515311 PRKCQQ04759 706 aa21.49■■□□□ 1.03
LSM6-207ENST00000515311 GALNT2Q10471 571 aa21.49■■□□□ 1.03
LSM6-207ENST00000515311 PLEKHG6Q3KR16 790 aa21.49■■□□□ 1.03
LSM6-207ENST00000515311 PITRM1Q5JRX3 1037 aa21.49■■□□□ 1.03
LSM6-207ENST00000515311 CCDC181Q5TID7 509 aa21.49■■□□□ 1.03
LSM6-207ENST00000515311 NUDT18Q6ZVK8 323 aa21.49■■□□□ 1.03
LSM6-207ENST00000515311 TERB1Q8NA31 727 aa21.49■■□□□ 1.03
LSM6-207ENST00000515311 DCAF4L2Q8NA75 395 aa21.49■■□□□ 1.03
LSM6-207ENST00000515311 TTC13Q8NBP0 860 aa21.49■■□□□ 1.03
LSM6-207ENST00000515311 P3H4Q92791 437 aa21.49■■□□□ 1.03
LSM6-207ENST00000515311 CELF6Q96J87 481 aaKnown RBP21.49■■□□□ 1.03
LSM6-207ENST00000515311 OLFM3Q96PB7 478 aa21.49■■□□□ 1.03
LSM6-207ENST00000515311 UHRF1Q96T88 793 aaPredicted RBP21.49■■□□□ 1.03
LSM6-207ENST00000515311 ACE2Q9BYF1 805 aaPredicted RBP21.49■■□□□ 1.03
LSM6-207ENST00000515311 SLC39A8Q9C0K1 460 aa21.49■■□□□ 1.03
LSM6-207ENST00000515311 ARHGEF3Q9NR81 526 aa21.49■■□□□ 1.03
LSM6-207ENST00000515311 VPS28Q9UK41 221 aa21.49■■□□□ 1.03
LSM6-207ENST00000515311 HEY1Q9Y5J3 304 aa21.49■■□□□ 1.03
LSM6-207ENST00000515311 A0A0A0MRY4 1105 aa21.48■■□□□ 1.03
LSM6-207ENST00000515311 CXorf51AA0A1B0GTR3 108 aa21.48■■□□□ 1.03
LSM6-207ENST00000515311 MAN2B1O00754 1011 aa21.48■■□□□ 1.03
LSM6-207ENST00000515311 TRIM24O15164 1050 aa21.48■■□□□ 1.03
LSM6-207ENST00000515311 ZNF185O15231 689 aa21.48■■□□□ 1.03
LSM6-207ENST00000515311 KAT7O95251 611 aa21.48■■□□□ 1.03
LSM6-207ENST00000515311 PECAM1P16284 738 aaPredicted RBP21.48■■□□□ 1.03
LSM6-207ENST00000515311 MX2P20592 715 aa21.48■■□□□ 1.03
LSM6-207ENST00000515311 GALK1P51570 392 aa21.48■■□□□ 1.03
LSM6-207ENST00000515311 KDSRQ06136 332 aa21.48■■□□□ 1.03
LSM6-207ENST00000515311 SLC10A2Q12908 348 aaPredicted RBP21.48■■□□□ 1.03
LSM6-207ENST00000515311 SERINC3Q13530 473 aa21.48■■□□□ 1.03
LSM6-207ENST00000515311 EIF4HQ15056 248 aaKnown RBP21.48■■□□□ 1.03
LSM6-207ENST00000515311 GEN1Q17RS7 908 aa21.48■■□□□ 1.03
LSM6-207ENST00000515311 FUT11Q495W5 492 aa21.48■■□□□ 1.03
LSM6-207ENST00000515311 IER5LQ5T953 404 aa21.48■■□□□ 1.03
LSM6-207ENST00000515311 NAIF1Q69YI7 327 aaPredicted RBP21.48■■□□□ 1.03
LSM6-207ENST00000515311 TXNDC11Q6PKC3 985 aa21.48■■□□□ 1.03
LSM6-207ENST00000515311 TPRG1Q6ZUI0 275 aa21.48■■□□□ 1.03
LSM6-207ENST00000515311 ADIPOR2Q86V24 386 aa21.48■■□□□ 1.03
LSM6-207ENST00000515311 OR7D4Q8NG98 312 aa21.48■■□□□ 1.03
LSM6-207ENST00000515311 KIF18AQ8NI77 898 aa21.48■■□□□ 1.03
LSM6-207ENST00000515311 HMCESQ96FZ2 354 aa21.48■■□□□ 1.03
LSM6-207ENST00000515311 MS4A14Q96JA4 679 aa21.48■■□□□ 1.03
LSM6-207ENST00000515311 C2orf49Q9BVC5 232 aaPredicted RBP21.48■■□□□ 1.03
LSM6-207ENST00000515311 ATP13A1Q9HD20 1204 aa21.48■■□□□ 1.03
LSM6-207ENST00000515311 RNF14Q9UBS8 474 aa21.48■■□□□ 1.03
LSM6-207ENST00000515311 FBXL21Q9UKT6 434 aa21.48■■□□□ 1.03
LSM6-207ENST00000515311 INTS6Q9UL03 887 aaKnown RBP21.48■■□□□ 1.03
LSM6-207ENST00000515311 F5P12259 2224 aa21.48■■□□□ 1.03
LSM6-207ENST00000515311 TCRBV7S2A1N4TA0A589 114 aa21.47■■□□□ 1.03
LSM6-207ENST00000515311 DFFAO00273 331 aa21.47■■□□□ 1.03
LSM6-207ENST00000515311 TIMM44O43615 452 aa21.47■■□□□ 1.03
LSM6-207ENST00000515311 APODP05090 189 aa21.47■■□□□ 1.03
LSM6-207ENST00000515311 ACVRL1P37023 503 aa21.47■■□□□ 1.03
LSM6-207ENST00000515311 PAPOLAP51003 745 aaKnown RBP21.47■■□□□ 1.03
LSM6-207ENST00000515311 MESP2Q0VG99 397 aa21.47■■□□□ 1.03
LSM6-207ENST00000515311 PDK1Q15118 436 aa21.47■■□□□ 1.03
LSM6-207ENST00000515311 LONRF2Q1L5Z9 754 aa21.47■■□□□ 1.03
LSM6-207ENST00000515311 TMEM196Q5HYL7 178 aa21.47■■□□□ 1.03
LSM6-207ENST00000515311 NPNTQ6UXI9 565 aa21.47■■□□□ 1.03
LSM6-207ENST00000515311 CREG2Q8IUH2 290 aa21.47■■□□□ 1.03
LSM6-207ENST00000515311 APCDD1Q8J025 514 aa21.47■■□□□ 1.03
LSM6-207ENST00000515311 ZNF592Q92610 1267 aa21.47■■□□□ 1.03
LSM6-207ENST00000515311 TTC17Q96AE7 1141 aa21.47■■□□□ 1.03
LSM6-207ENST00000515311 ACDQ96AP0 544 aa21.47■■□□□ 1.03
LSM6-207ENST00000515311 SHDQ96IW2 340 aa21.47■■□□□ 1.03
LSM6-207ENST00000515311 FRMD8P1Q9BZ68 369 aaPredicted RBP21.47■■□□□ 1.03
LSM6-207ENST00000515311 BRD8Q9H0E9 1235 aa21.47■■□□□ 1.03
LSM6-207ENST00000515311 SAE1Q9UBE0 346 aaPredicted RBP21.47■■□□□ 1.03
LSM6-207ENST00000515311 HPCAL4Q9UM19 191 aa21.47■■□□□ 1.03
LSM6-207ENST00000515311 BDP1A6H8Y1 2624 aa21.47■■□□□ 1.03
LSM6-207ENST00000515311 NCOR1O75376 2440 aa21.47■■□□□ 1.03
LSM6-207ENST00000515311 SHISA7A6NL88 538 aa21.46■■□□□ 1.03
LSM6-207ENST00000515311 KDELR3O43731 214 aa21.46■■□□□ 1.03
LSM6-207ENST00000515311 DRD1P21728 446 aa21.46■■□□□ 1.03
LSM6-207ENST00000515311 GARSP41250 739 aaKnown RBP21.46■■□□□ 1.03
LSM6-207ENST00000515311 OTUD4Q01804 1114 aaKnown RBP21.46■■□□□ 1.03
LSM6-207ENST00000515311 SULT2A1Q06520 285 aa21.46■■□□□ 1.03
LSM6-207ENST00000515311 ZNF33AQ06730 810 aa21.46■■□□□ 1.03
LSM6-207ENST00000515311 NOMO1Q15155 1222 aa21.46■■□□□ 1.03
LSM6-207ENST00000515311 TMEM215Q68D42 235 aa21.46■■□□□ 1.03
LSM6-207ENST00000515311 IL31Q6EBC2 164 aa21.46■■□□□ 1.03
LSM6-207ENST00000515311 ZNF852Q6ZMS4 543 aa21.46■■□□□ 1.03
LSM6-207ENST00000515311 TP53INP2Q8IXH6 220 aa21.46■■□□□ 1.03
LSM6-207ENST00000515311 ATPAF2Q8N5M1 289 aa21.46■■□□□ 1.03
LSM6-207ENST00000515311 ACTL9Q8TC94 416 aa21.46■■□□□ 1.03
LSM6-207ENST00000515311 FAM3CQ92520 227 aa21.46■■□□□ 1.03
LSM6-207ENST00000515311 HDAC11Q96DB2 347 aa21.46■■□□□ 1.03
LSM6-207ENST00000515311 TSGA13Q96PP4 275 aa21.46■■□□□ 1.03
LSM6-207ENST00000515311 SPON2Q9BUD6 331 aa21.46■■□□□ 1.03
LSM6-207ENST00000515311 FBRSL1Q9HCM7 1045 aaKnown RBP21.46■■□□□ 1.03
LSM6-207ENST00000515311 CA14Q9ULX7 337 aa21.46■■□□□ 1.03
LSM6-207ENST00000515311 TRIOO75962 3097 aa21.45■■□□□ 1.02
LSM6-207ENST00000515311 TBC1D3BA6NDS4 549 aa21.45■■□□□ 1.02
LSM6-207ENST00000515311 ZSCAN5CA6NGD5 496 aaPredicted RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms