RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 ADAMTS9Q9P2N4 1935 aa25.17■■□□□ 1.62
SNF8-213ENST00000514929 SPTBN2O15020 2390 aa25.17■■□□□ 1.62
SNF8-213ENST00000514929 NCOR2Q9Y618 2525 aa25.17■■□□□ 1.62
SNF8-213ENST00000514929 MID1O15344 667 aa25.16■■□□□ 1.62
SNF8-213ENST00000514929 GJB6O95452 261 aa25.16■■□□□ 1.62
SNF8-213ENST00000514929 SLC8A1P32418 973 aa25.16■■□□□ 1.62
SNF8-213ENST00000514929 PSMD8P48556 350 aa25.16■■□□□ 1.62
SNF8-213ENST00000514929 ELAVL3Q14576 367 aaKnown RBP25.16■■□□□ 1.62
SNF8-213ENST00000514929 KLHL40Q2TBA0 621 aa25.16■■□□□ 1.62
SNF8-213ENST00000514929 ARL13BQ3SXY8 428 aa25.16■■□□□ 1.62
SNF8-213ENST00000514929 CCDC14Q49A88 953 aa25.16■■□□□ 1.62
SNF8-213ENST00000514929 TFAP2DQ7Z6R9 452 aa25.16■■□□□ 1.62
SNF8-213ENST00000514929 MINDY1Q8N5J2 469 aa25.16■■□□□ 1.62
SNF8-213ENST00000514929 FAM129BQ96TA1 746 aa25.16■■□□□ 1.62
SNF8-213ENST00000514929 OMDQ99983 421 aa25.16■■□□□ 1.62
SNF8-213ENST00000514929 PCDH15Q96QU1 1955 aa25.15■■□□□ 1.62
SNF8-213ENST00000514929 IGLV3-10A0A075B6K4 115 aa25.15■■□□□ 1.62
SNF8-213ENST00000514929 A0A1W2PP55 124 aa25.15■■□□□ 1.62
SNF8-213ENST00000514929 C2CD4BA6NLJ0 364 aa25.15■■□□□ 1.62
SNF8-213ENST00000514929 BCAT2O15382 392 aaPredicted RBP25.15■■□□□ 1.62
SNF8-213ENST00000514929 RNASEH2AO75792 299 aaKnown RBP25.15■■□□□ 1.62
SNF8-213ENST00000514929 VAV1P15498 845 aa25.15■■□□□ 1.62
SNF8-213ENST00000514929 PTPN9P43378 593 aa25.15■■□□□ 1.62
SNF8-213ENST00000514929 KRT83P78385 493 aa25.15■■□□□ 1.62
SNF8-213ENST00000514929 C6orf118Q5T5N4 469 aa25.15■■□□□ 1.62
SNF8-213ENST00000514929 SH3PXD2AQ5TCZ1 1133 aa25.15■■□□□ 1.62
SNF8-213ENST00000514929 SETD3Q86TU7 594 aaPredicted RBP25.15■■□□□ 1.62
SNF8-213ENST00000514929 FUCA2Q9BTY2 467 aa25.15■■□□□ 1.62
SNF8-213ENST00000514929 MYO6Q9UM54 1294 aa25.15■■□□□ 1.62
SNF8-213ENST00000514929 ZBTB32Q9Y2Y4 487 aaPredicted RBP25.15■■□□□ 1.62
SNF8-213ENST00000514929 SYCE3A1L190 88 aa25.14■■□□□ 1.62
SNF8-213ENST00000514929 FAM47DPA6NHR8 397 aa25.14■■□□□ 1.62
SNF8-213ENST00000514929 ATP9BO43861 1147 aa25.14■■□□□ 1.62
SNF8-213ENST00000514929 OPHN1O60890 802 aa25.14■■□□□ 1.62
SNF8-213ENST00000514929 FSBPO95073 299 aa25.14■■□□□ 1.62
SNF8-213ENST00000514929 ADH1BP00325 375 aa25.14■■□□□ 1.62
SNF8-213ENST00000514929 IL1BP01584 269 aa25.14■■□□□ 1.62
SNF8-213ENST00000514929 OR1E1P30953 314 aa25.14■■□□□ 1.62
SNF8-213ENST00000514929 VASPP50552 380 aaPredicted RBP25.14■■□□□ 1.62
SNF8-213ENST00000514929 GSCP56915 257 aaPredicted RBP25.14■■□□□ 1.62
SNF8-213ENST00000514929 RAB6CQ53S08 254 aa25.14■■□□□ 1.62
SNF8-213ENST00000514929 N4BP2L1Q5TBK1 243 aaPredicted RBP25.14■■□□□ 1.62
SNF8-213ENST00000514929 MON1BQ7L1V2 547 aa25.14■■□□□ 1.62
SNF8-213ENST00000514929 STRADAQ7RTN6 431 aa25.14■■□□□ 1.62
SNF8-213ENST00000514929 C3orf20Q8ND61 904 aa25.14■■□□□ 1.62
SNF8-213ENST00000514929 OR2I1PQ8NGU4 316 aa25.14■■□□□ 1.62
SNF8-213ENST00000514929 FRS2Q8WU20 508 aa25.14■■□□□ 1.62
SNF8-213ENST00000514929 C2orf49Q9BVC5 232 aaPredicted RBP25.14■■□□□ 1.62
SNF8-213ENST00000514929 ZYG11BQ9C0D3 744 aa25.14■■□□□ 1.62
SNF8-213ENST00000514929 RAB6CQ9H0N0 254 aa25.14■■□□□ 1.62
SNF8-213ENST00000514929 SERGEFQ9UGK8 458 aa25.14■■□□□ 1.62
SNF8-213ENST00000514929 NYNRINQ9P2P1 1898 aaKnown RBP25.13■■□□□ 1.61
SNF8-213ENST00000514929 SERPINC1P01008 464 aa25.13■■□□□ 1.61
SNF8-213ENST00000514929 CSRP1P21291 193 aaKnown RBP25.13■■□□□ 1.61
SNF8-213ENST00000514929 GPD1P21695 349 aa25.13■■□□□ 1.61
SNF8-213ENST00000514929 C5AR1P21730 350 aa25.13■■□□□ 1.61
SNF8-213ENST00000514929 RFC1P35251 1148 aaPredicted RBP25.13■■□□□ 1.61
SNF8-213ENST00000514929 ADRA1BP35368 520 aa25.13■■□□□ 1.61
SNF8-213ENST00000514929 C1QBPQ07021 282 aaKnown RBP25.13■■□□□ 1.61
SNF8-213ENST00000514929 GRIK2Q13002 908 aa25.13■■□□□ 1.61
SNF8-213ENST00000514929 IQCB1Q15051 598 aa25.13■■□□□ 1.61
SNF8-213ENST00000514929 DLG2Q15700 870 aa25.13■■□□□ 1.61
SNF8-213ENST00000514929 DNAJC24Q6P3W2 148 aa25.13■■□□□ 1.61
SNF8-213ENST00000514929 DSG4Q86SJ6 1040 aa25.13■■□□□ 1.61
SNF8-213ENST00000514929 SH2D3CQ8N5H7 860 aa25.13■■□□□ 1.61
SNF8-213ENST00000514929 FAM172AQ8WUF8 416 aa25.13■■□□□ 1.61
SNF8-213ENST00000514929 BAP1Q92560 729 aa25.13■■□□□ 1.61
SNF8-213ENST00000514929 BIRC7Q96CA5 298 aa25.13■■□□□ 1.61
SNF8-213ENST00000514929 ZDHHC5Q9C0B5 715 aa25.13■■□□□ 1.61
SNF8-213ENST00000514929 NEUROG2Q9H2A3 272 aa25.13■■□□□ 1.61
SNF8-213ENST00000514929 FZD4Q9ULV1 537 aa25.13■■□□□ 1.61
SNF8-213ENST00000514929 NUMA1Q14980 2115 aa25.13■■□□□ 1.61
SNF8-213ENST00000514929 ANKRD62A6NC57 917 aa25.12■■□□□ 1.61
SNF8-213ENST00000514929 TNFAIP3P21580 790 aa25.12■■□□□ 1.61
SNF8-213ENST00000514929 TPM4P67936 248 aa25.12■■□□□ 1.61
SNF8-213ENST00000514929 WDR59Q6PJI9 974 aa25.12■■□□□ 1.61
SNF8-213ENST00000514929 IRF2BP2Q7Z5L9 587 aa25.12■■□□□ 1.61
SNF8-213ENST00000514929 ATP11CQ8NB49 1132 aa25.12■■□□□ 1.61
SNF8-213ENST00000514929 DEFB124Q8NES8 71 aa25.12■■□□□ 1.61
SNF8-213ENST00000514929 OR8D1Q8WZ84 308 aa25.12■■□□□ 1.61
SNF8-213ENST00000514929 NAP1L5Q96NT1 182 aaPredicted RBP25.12■■□□□ 1.61
SNF8-213ENST00000514929 PSMB7Q99436 277 aa25.12■■□□□ 1.61
SNF8-213ENST00000514929 OR12D3Q9UGF7 316 aa25.12■■□□□ 1.61
SNF8-213ENST00000514929 VPS51Q9UID3 782 aa25.12■■□□□ 1.61
SNF8-213ENST00000514929 CNOT1A5YKK6 2376 aaKnown RBP25.12■■□□□ 1.61
SNF8-213ENST00000514929 A0A0D9SEW6 157 aa25.11■■□□□ 1.61
SNF8-213ENST00000514929 A0A1B0GTH6 734 aa25.11■■□□□ 1.61
SNF8-213ENST00000514929 A0A1W2PQC6 194 aa25.11■■□□□ 1.61
SNF8-213ENST00000514929 LRRC72A6NJI9 287 aa25.11■■□□□ 1.61
SNF8-213ENST00000514929 LRRC53A6NM62 1247 aa25.11■■□□□ 1.61
SNF8-213ENST00000514929 SIGLEC16A6NMB1 481 aa25.11■■□□□ 1.61
SNF8-213ENST00000514929 GIPC1O14908 333 aa25.11■■□□□ 1.61
SNF8-213ENST00000514929 BNIP3LO60238 219 aa25.11■■□□□ 1.61
SNF8-213ENST00000514929 SNAP91O60641 907 aa25.11■■□□□ 1.61
SNF8-213ENST00000514929 CEACAM1P13688 526 aa25.11■■□□□ 1.61
SNF8-213ENST00000514929 GALCP54803 685 aa25.11■■□□□ 1.61
SNF8-213ENST00000514929 SEMA3BQ13214 749 aa25.11■■□□□ 1.61
SNF8-213ENST00000514929 ASIC2Q16515 512 aa25.11■■□□□ 1.61
SNF8-213ENST00000514929 KIAA0895LQ68EN5 471 aa25.11■■□□□ 1.61
SNF8-213ENST00000514929 ACAD10Q6JQN1 1059 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms