RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 MS4A13Q5J8X5 152 aa15.21■□□□□ 0.02
PHF3-209ENST00000509330 C16orf46Q6P387 395 aa15.21■□□□□ 0.02
PHF3-209ENST00000509330 SPNS2Q8IVW8 549 aa15.21■□□□□ 0.02
PHF3-209ENST00000509330 IGSF8Q969P0 613 aa15.21■□□□□ 0.02
PHF3-209ENST00000509330 APOPT1Q96IL0 206 aa15.21■□□□□ 0.02
PHF3-209ENST00000509330 BEGAINQ9BUH8 593 aa15.21■□□□□ 0.02
PHF3-209ENST00000509330 ELAC1Q9H777 363 aaKnown RBP15.21■□□□□ 0.02
PHF3-209ENST00000509330 CATSPERBQ9H7T0 1116 aa15.21■□□□□ 0.02
PHF3-209ENST00000509330 RBM22Q9NW64 420 aaKnown RBP eCLIP15.21■□□□□ 0.024e-6■□□□□ 10.1
PHF3-209ENST00000509330 FETUBQ9UGM5 382 aa15.21■□□□□ 0.02
PHF3-209ENST00000509330 DCTN4Q9UJW0 460 aa15.21■□□□□ 0.02
PHF3-209ENST00000509330 J3KR12 359 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 TLR5O60602 858 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 MAFKO60675 156 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 PGAM1P18669 254 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 SAT1P21673 171 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 PDK4Q16654 411 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 HSP90AA5PQ58FG0 334 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 RFWD3Q6PCD5 774 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 SLC39A5Q6ZMH5 540 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 PNPLA1Q8N8W4 532 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 ATP2A3Q93084 1043 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 RPRD1AQ96P16 312 aaPredicted RBP15.2■□□□□ 0.02
PHF3-209ENST00000509330 NPHS2Q9NP85 383 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 BFARQ9NZS9 450 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 OR6C75A6NL08 312 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 RFPL1O75677 317 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 GJB3O75712 270 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 ZWINTO95229 277 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 HLA-DQB2P05538 268 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 HAPLN1P10915 354 aaPredicted RBP15.2■□□□□ 0.02
PHF3-209ENST00000509330 CHRNA4P43681 627 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 MLLT6P55198 1093 aaPredicted RBP15.2■□□□□ 0.02
PHF3-209ENST00000509330 MGAT5Q09328 741 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 GPR17Q13304 367 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 SCML4Q8N228 414 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 ZNF512Q96ME7 567 aaPredicted RBP15.2■□□□□ 0.02
PHF3-209ENST00000509330 VN1R3Q9BXE9 311 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.2■□□□□ 0.02
PHF3-209ENST00000509330 MOCS1Q9NZB8 636 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 TLR6Q9Y2C9 796 aa15.2■□□□□ 0.02
PHF3-209ENST00000509330 CCT8L1PA6NM43 557 aa15.19■□□□□ 0.02
PHF3-209ENST00000509330 CAPN15O75808 1086 aa15.19■□□□□ 0.02
PHF3-209ENST00000509330 KRT38O76015 456 aa15.19■□□□□ 0.02
PHF3-209ENST00000509330 POLBP06746 335 aa15.19■□□□□ 0.02
PHF3-209ENST00000509330 PAX3P23760 479 aa15.19■□□□□ 0.02
PHF3-209ENST00000509330 RASA2Q15283 850 aa15.19■□□□□ 0.02
PHF3-209ENST00000509330 PPM1JQ5JR12 505 aa15.19■□□□□ 0.02
PHF3-209ENST00000509330 FBXW10Q5XX13 1052 aa15.19■□□□□ 0.02
PHF3-209ENST00000509330 ITPRIPL1Q6GPH6 555 aa15.19■□□□□ 0.02
PHF3-209ENST00000509330 CMC1Q7Z7K0 106 aa15.19■□□□□ 0.02
PHF3-209ENST00000509330 LRRC43Q8N309 656 aa15.19■□□□□ 0.02
PHF3-209ENST00000509330 ZSCAN18Q8TBC5 510 aaPredicted RBP15.19■□□□□ 0.02
PHF3-209ENST00000509330 CCT6BQ92526 530 aa15.19■□□□□ 0.02
PHF3-209ENST00000509330 HMCESQ96FZ2 354 aa15.19■□□□□ 0.02
PHF3-209ENST00000509330 FICDQ9BVA6 458 aa15.19■□□□□ 0.02
PHF3-209ENST00000509330 ZNF395Q9H8N7 513 aaPredicted RBP15.19■□□□□ 0.02
PHF3-209ENST00000509330 TXNDC16Q9P2K2 825 aa15.19■□□□□ 0.02
PHF3-209ENST00000509330 IPO11Q9UI26 975 aaKnown RBP15.19■□□□□ 0.02
PHF3-209ENST00000509330 SUN1O94901 812 aa15.19■□□□□ 0.02
PHF3-209ENST00000509330 CDK16Q00536 496 aa15.19■□□□□ 0.02
PHF3-209ENST00000509330 MANEALQ5VSG8 457 aa15.19■□□□□ 0.02
PHF3-209ENST00000509330 FBXL22Q6P050 247 aa15.19■□□□□ 0.02
PHF3-209ENST00000509330 TRPM8Q7Z2W7 1104 aa15.19■□□□□ 0.02
PHF3-209ENST00000509330 CHSY1Q86X52 802 aa15.19■□□□□ 0.02
PHF3-209ENST00000509330 SPATS2Q86XZ4 545 aaKnown RBP15.19■□□□□ 0.02
PHF3-209ENST00000509330 SLC25A41Q8N5S1 370 aa15.19■□□□□ 0.02
PHF3-209ENST00000509330 EIF2B3Q9NR50 452 aaKnown RBP15.19■□□□□ 0.02
PHF3-209ENST00000509330 TLR8Q9NR97 1041 aaKnown RBP15.19■□□□□ 0.02
PHF3-209ENST00000509330 ACTL7AQ9Y615 435 aa15.19■□□□□ 0.02
PHF3-209ENST00000509330 C2orf71A6NGG8 1288 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 TPP1O14773 563 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 SPATA31D3P0C874 917 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 IRF1P10914 325 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 MLNP12872 115 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 NMBRP28336 390 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 PDE1BQ01064 536 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 ARTNQ5T4W7 220 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 PACS1Q6VY07 963 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 ZCCHC23Q6ZST2 131 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 SPATA31D4Q6ZUB0 917 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 SH2D5Q6ZV89 423 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 OTOAQ7RTW8 1153 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 RTL3Q8N8U3 475 aaKnown RBP15.18■□□□□ 0.02
PHF3-209ENST00000509330 CERS2Q96G23 380 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 NOL6Q9H6R4 1146 aaKnown RBP15.18■□□□□ 0.02
PHF3-209ENST00000509330 CAB39LQ9H9S4 337 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 NT5MQ9NPB1 228 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 TMEM39AQ9NV64 488 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 UBOX5O94941 541 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 GJB5O95377 273 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 ACRP10323 421 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 DEFB103AP81534 67 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 LGSNQ5TDP6 509 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 CDKL2Q92772 493 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 PSMG2Q969U7 264 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 SLC39A13Q96H72 371 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 MRPL9Q9BYD2 267 aaKnown RBP15.18■□□□□ 0.02
PHF3-209ENST00000509330 BRD8Q9H0E9 1235 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 C20orf96Q9NUD7 363 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms