RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 HACD1B0YJ81 288 aa11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 MFSD11O43934 449 aa11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 PQBP1O60828 265 aaKnown RBP11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 AVILO75366 819 aa11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 PIAS1O75925 651 aa11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 KLHL2O95198 593 aa11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 APRTP07741 180 aa11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 MYL4P12829 197 aa11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 FDFT1P37268 417 aa11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 CDK7P50613 346 aa11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 TSPY1Q01534 308 aa11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 STX3Q13277 289 aa11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 KPNB1Q14974 876 aaKnown RBP11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 TCTN1Q2MV58 587 aa11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 SLC39A12Q504Y0 691 aa11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 RFWD3Q6PCD5 774 aa11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 PRPF39Q86UA1 669 aaKnown RBP11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 WDR75Q8IWA0 830 aaKnown RBP11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 THEM5Q8N1Q8 247 aa11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 URGCPQ8TCY9 931 aa11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 CDKL2Q92772 493 aa11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 B3GALT6Q96L58 329 aa11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 SIGLEC10Q96LC7 697 aa11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 LGMNQ99538 433 aa11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 NAT9Q9BTE0 207 aa11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 C12orf65Q9H3J6 166 aaKnown RBP11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 GPAMQ9HCL2 828 aa11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 PPARGC1AQ9UBK2 798 aaKnown RBP11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 NUMBLQ9Y6R0 609 aa11.28□□□□□ -0.6
SH3RF1-203ENST00000508685 FKBP6O75344 327 aa11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 TM7SF2O76062 418 aa11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 TYMPP19971 482 aa11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 PGFP49763 221 aa11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 AP2B1P63010 937 aa11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 SEMA5AQ13591 1074 aa11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 CHI3L2Q15782 390 aa11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 BSPRYQ5W0U4 402 aa11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 UNC5AQ6ZN44 842 aa11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 ARID3BQ8IVW6 561 aaPredicted RBP11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 SCUBE1Q8IWY4 988 aa11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 TP53INP2Q8IXH6 220 aa11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 NDUFAF2Q8N183 169 aa11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 SCG3Q8WXD2 468 aaKnown RBP11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 FAM136AQ96C01 138 aa11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 DEFB118Q96PH6 123 aa11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 FAM167BQ9BTA0 163 aa11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 CCDC28BQ9BUN5 200 aa11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 FTHL17Q9BXU8 183 aa11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 NMUR2Q9GZQ4 415 aa11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 TMEM161AQ9NX61 479 aa11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 DCDC2Q9UHG0 476 aa11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 SCOCQ9UIL1 159 aa11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 PCDHB8Q9UN66 801 aa11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 PTPRDP23468 1912 aa11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 BPTFQ12830 3046 aa11.27□□□□□ -0.61
SH3RF1-203ENST00000508685 MAGEA13PA6NCF6 341 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 ALDH1A2O94788 518 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 VAV1P15498 845 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 ADRA1BP35368 520 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 PBX3P40426 434 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 RGS19P49795 217 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 SLC5A3P53794 718 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 INSCQ1MX18 579 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 TEX44Q53QW1 395 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 STEAP4Q687X5 459 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 PM20D1Q6GTS8 502 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 AAGABQ6PD74 315 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 CDHR3Q6ZTQ4 885 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 RFX8Q6ZV50 586 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 SPATA2LQ8IUW3 424 aaPredicted RBP11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 PSTKQ8IV42 348 aaKnown RBP11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 SCLYQ96I15 445 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 OLFM3Q96PB7 478 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 QKIQ96PU8 341 aaKnown RBP eCLIP11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 FAM193BQ96PV7 902 aaPredicted RBP11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 NR1H4Q96RI1 486 aaPredicted RBP11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 COLEC11Q9BWP8 271 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 ABI2Q9NYB9 513 aaPredicted RBP11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 MOCS1Q9NZB8 636 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 RCOR3Q9P2K3 495 aaPredicted RBP11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 TTC3P53804 2025 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 CXorf49A8MYA2 514 aaPredicted RBP11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 F5H423 210 aaPredicted RBP11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 EEF2KO00418 725 aaKnown RBP11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 ENPP3O14638 875 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 GLRA3O75311 464 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 TBX10O75333 385 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 KRT36O76013 467 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 STK10O94804 968 aaKnown RBP11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 METTL18O95568 372 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 LINGO3P0C6S8 592 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 AOC1P19801 751 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 GRK2P25098 689 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 GRIK1P39086 918 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 PSEN1P49768 467 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 ATN1P54259 1190 aaPredicted RBP11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 AQP5P55064 265 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 THOC5Q13769 683 aaKnown RBP11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 DPYSQ14117 519 aa11.26□□□□□ -0.61
SH3RF1-203ENST00000508685 MAPRE1Q15691 268 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms