RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 SFMBT1Q9UHJ3 866 aa9.45□□□□□ -0.9
CAST-220ENST00000508117 SATB2Q9UPW6 733 aa9.45□□□□□ -0.9
CAST-220ENST00000508117 U3KQA8 63 aa9.45□□□□□ -0.9
CAST-220ENST00000508117 MYO9AB2RTY4 2548 aa9.45□□□□□ -0.9
CAST-220ENST00000508117 A0A1W2PNU3 283 aaPredicted RBP9.44□□□□□ -0.9
CAST-220ENST00000508117 TYW5A2RUC4 315 aaKnown RBP9.44□□□□□ -0.9
CAST-220ENST00000508117 TTC34A8MYJ7 566 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 SCAMP1O15126 338 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 MAPK13O15264 365 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 ACSL4O60488 711 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 TCEA3O75764 348 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 MOCS3O95396 460 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 GP1BBP13224 206 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 ITGB6P18564 788 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 SLC6A4P31645 630 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 ECT2LQ008S8 904 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 ENPEPQ07075 957 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 KCNMA1Q12791 1236 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 C3orf38Q5JPI3 329 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 RFWD3Q6PCD5 774 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.44□□□□□ -0.9
CAST-220ENST00000508117 STK40Q8N2I9 435 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 ARL14Q8N4G2 192 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 IQUBQ8NA54 791 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 TPCN2Q8NHX9 752 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 FAM174AQ8TBP5 190 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 MAPK15Q8TD08 544 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 HEXIM2Q96MH2 286 aaKnown RBP9.44□□□□□ -0.9
CAST-220ENST00000508117 SPAG5Q96R06 1193 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 DDX50Q9BQ39 737 aaKnown RBP9.44□□□□□ -0.9
CAST-220ENST00000508117 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.44□□□□□ -0.9
CAST-220ENST00000508117 ULBP1Q9BZM6 244 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 TRIM4Q9C037 500 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 PREBQ9HCU5 417 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 CNGB3Q9NQW8 809 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 SLCO3A1Q9UIG8 710 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 ATXN7L1Q9ULK2 861 aaPredicted RBP9.44□□□□□ -0.9
CAST-220ENST00000508117 ENTPD2Q9Y5L3 495 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 RP1P56715 2156 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 NOTCH2Q04721 2471 aa9.44□□□□□ -0.9
CAST-220ENST00000508117 USP9YO00507 2555 aaPredicted RBP9.44□□□□□ -0.9
CAST-220ENST00000508117 LCE2BO14633 110 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 XPO1O14980 1071 aaKnown RBP9.43□□□□□ -0.9
CAST-220ENST00000508117 EFSO43281 561 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 MSI1O43347 362 aaKnown RBP9.43□□□□□ -0.9
CAST-220ENST00000508117 IL1BP01584 269 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 ITGA2BP08514 1039 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 THEGLP0DJG4 465 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 CD58P19256 250 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 PDCP20941 246 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 NNMTP40261 264 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 SERINC3Q13530 473 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 SLC12A1Q13621 1099 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 CDH18Q13634 790 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 FAM46CQ5VWP2 391 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 NEK5Q6P3R8 708 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 TMC6Q7Z403 805 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 DSG4Q86SJ6 1040 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 DCP2Q8IU60 420 aaKnown RBP9.43□□□□□ -0.9
CAST-220ENST00000508117 CCDC117Q8IWD4 279 aaPredicted RBP9.43□□□□□ -0.9
CAST-220ENST00000508117 SLC4A11Q8NBS3 891 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 WDR36Q8NI36 951 aaKnown RBP9.43□□□□□ -0.9
CAST-220ENST00000508117 WDR48Q8TAF3 677 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 IFI44Q8TCB0 444 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 KCTD13Q8WZ19 329 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 ATXN7L3BQ96GX2 97 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 PRICKLE1Q96MT3 831 aaPredicted RBP9.43□□□□□ -0.9
CAST-220ENST00000508117 IPO9Q96P70 1041 aaKnown RBP9.43□□□□□ -0.9
CAST-220ENST00000508117 SRRTQ9BXP5 876 aaKnown RBP9.43□□□□□ -0.9
CAST-220ENST00000508117 LRRC4Q9HBW1 653 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 SLC39A2Q9NP94 309 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 SEPT3Q9UH03 358 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 ACSL6Q9UKU0 697 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 CSNK1G3Q9Y6M4 447 aa9.43□□□□□ -0.9
CAST-220ENST00000508117 GOLGA6L7A0A1B0GV03 622 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 EME2A4GXA9 379 aaPredicted RBP9.42□□□□□ -0.9
CAST-220ENST00000508117 VPS37CA5D8V6 355 aaPredicted RBP9.42□□□□□ -0.9
CAST-220ENST00000508117 YJEFN3A6XGL0 299 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 E7ENQ6 273 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 K7ESM1 405 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 PDXKO00764 312 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 ALOX15BO15296 676 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 GPR37O15354 613 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 FFAR2O15552 330 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 RTN2O75298 545 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 LUC7L3O95232 432 aaKnown RBP9.42□□□□□ -0.9
CAST-220ENST00000508117 GJB6O95452 261 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 KRT10P13645 584 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 TGM2P21980 687 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 MAT2AP31153 395 aaKnown RBP9.42□□□□□ -0.9
CAST-220ENST00000508117 CTSOP43234 321 aaPredicted RBP9.42□□□□□ -0.9
CAST-220ENST00000508117 NASPP49321 788 aaPredicted RBP9.42□□□□□ -0.9
CAST-220ENST00000508117 RAD23BP54727 409 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 MCCD1P59942 119 aaPredicted RBP9.42□□□□□ -0.9
CAST-220ENST00000508117 RPS24P62847 133 aaKnown RBP9.42□□□□□ -0.9
CAST-220ENST00000508117 SULT2A1Q06520 285 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 NNTQ13423 1086 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 UBAP2LQ14157 1087 aaKnown RBP9.42□□□□□ -0.9
CAST-220ENST00000508117 ZNF394Q53GI3 561 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 FSCBQ5H9T9 825 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms