RNA–Protein interactions for RNA: ENST00000506831.1

CCHCR1-220, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-220ENST00000506831 PRICKLE1Q96MT3 831 aaPredicted RBP11.69□□□□□ -0.54
CCHCR1-220ENST00000506831 FAM129BQ96TA1 746 aa11.69□□□□□ -0.54
CCHCR1-220ENST00000506831 OMDQ99983 421 aa11.69□□□□□ -0.54
CCHCR1-220ENST00000506831 TRIM62Q9BVG3 475 aa11.69□□□□□ -0.54
CCHCR1-220ENST00000506831 TTYH3Q9C0H2 523 aa11.69□□□□□ -0.54
CCHCR1-220ENST00000506831 MTG2Q9H4K7 406 aa11.69□□□□□ -0.54
CCHCR1-220ENST00000506831 ERVMER34-1Q9H9K5 563 aa11.69□□□□□ -0.54
CCHCR1-220ENST00000506831 EBF2Q9HAK2 575 aa11.69□□□□□ -0.54
CCHCR1-220ENST00000506831 NLRC4Q9NPP4 1024 aa11.69□□□□□ -0.54
CCHCR1-220ENST00000506831 STIM2Q9P246 746 aa11.69□□□□□ -0.54
CCHCR1-220ENST00000506831 SERGEFQ9UGK8 458 aa11.69□□□□□ -0.54
CCHCR1-220ENST00000506831 ERVW-1Q9UQF0 538 aa11.69□□□□□ -0.54
CCHCR1-220ENST00000506831 PCDHB4Q9Y5E5 795 aa11.69□□□□□ -0.54
CCHCR1-220ENST00000506831 HELZ2Q9BYK8 2649 aaKnown RBP11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 PTPRQQ9UMZ3 2332 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 A0A1W2PP55 124 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 FAM47DPA6NHR8 397 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 M0QYV0 167 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 RNF225M0QZC1 329 aaPredicted RBP11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 ENC1O14682 589 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 MID1O15344 667 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 LUC7L3O95232 432 aaKnown RBP11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 LDOC1O95751 146 aaPredicted RBP11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 ADH1BP00325 375 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 WNT1P04628 370 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 ITGAVP06756 1048 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 PNMA6AP0CW24 399 aaPredicted RBP11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 KRT5P13647 590 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 HNF1BP35680 557 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 NUDT1P36639 197 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 NNMTP40261 264 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 ACADSBP45954 432 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 RXRGP48443 463 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 ARRB1P49407 418 aaPredicted RBP11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 VASPP50552 380 aaPredicted RBP11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 RPS24P62847 133 aaKnown RBP11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 ECT2LQ008S8 904 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 ILKQ13418 452 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 SLC12A1Q13621 1099 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 DRAP1Q14919 205 aaPredicted RBP11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 MEA1Q16626 185 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 SLC45A4Q5BKX6 768 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 FIGNQ5HY92 759 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 PITRM1Q5JRX3 1037 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 SPECC1LQ69YQ0 1117 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 MMAAQ8IVH4 418 aaKnown RBP11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 CACTIN-AS1Q8N1I8 211 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 CARNMT1Q8N4J0 409 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 DQX1Q8TE96 717 aaKnown RBP11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 STK32AQ8WU08 396 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 SHC3Q92529 594 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 PTPRN2Q92932 1015 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 FAM131CQ96AQ9 280 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 LRIG1Q96JA1 1093 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 SLC6A18Q96N87 628 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 ZSWIM1Q9BR11 485 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 STK33Q9BYT3 514 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 NUCKS1Q9H1E3 243 aaKnown RBP11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 KDM4CQ9H3R0 1056 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 GDF3Q9NR23 364 aa11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.68□□□□□ -0.54
CCHCR1-220ENST00000506831 A0A1W2PQJ5 194 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 FAM149AA5PLN7 773 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 F8VZ95 297 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 LATO43561 262 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 RFPL3O75679 317 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 RNASEH2AO75792 299 aaKnown RBP11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 GYPCP04921 128 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 JUPP14923 745 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 ABCB4P21439 1286 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 BRD2P25440 801 aaKnown RBP11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 CDC25BP30305 580 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 USP8P40818 1118 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 GPD2P43304 727 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 OXCT1P55809 520 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 JAM2P57087 298 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 IL9RQ01113 521 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 SULT2A1Q06520 285 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 OVGP1Q12889 678 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 TRIM14Q14142 442 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 ELAVL3Q14576 367 aaKnown RBP11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 SHBQ15464 509 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 DCAF6Q58WW2 860 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 FSCBQ5H9T9 825 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 C6orf118Q5T5N4 469 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 RNF219Q5W0B1 726 aaPredicted RBP11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 IQCHQ86VS3 1027 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 MARCH9Q86YJ5 346 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 GATAD2AQ86YP4 633 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 CLEC4CQ8WTT0 213 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 BAP1Q92560 729 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 TSC1Q92574 1164 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 NXPE2Q96DL1 559 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 IQCDQ96DY2 449 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 MYEOVQ96EZ4 313 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 CNDP2Q96KP4 475 aaKnown RBP11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 BTN2A3PQ96KV6 586 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 SPAG5Q96R06 1193 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 PPP1R9BQ96SB3 815 aa11.67□□□□□ -0.54
CCHCR1-220ENST00000506831 NRSN2Q9GZP1 204 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms